RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 PSG5Q15238 335 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 ZNF503Q96F45 646 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 TBX15Q96SF7 602 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 LRFN3Q9BTN0 628 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 OR51B2Q9Y5P1 312 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 M0R296 226 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 SERF1AO75920 110 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 RAB7AP51149 207 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 IGFL2Q6UWQ7 119 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 RPRMLQ8N4K4 120 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 LOXL4Q96JB6 756 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 GAL3ST2Q9H3Q3 398 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 PARD6AQ9NPB6 346 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 V9GYV3 84 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 DCHS1Q96JQ0 3298 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 RP1L1Q8IWN7 2480 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-233ENST00000642021 EP300Q09472 2414 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-233ENST00000642021 TRAV17A0A0B4J275 112 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 ZNF705FA8MVS1 300 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-233ENST00000642021 SPINK4O60575 86 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 ZNF705DP0CH99 300 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-233ENST00000642021 ZNF705BP0CI00 300 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-233ENST00000642021 ZNF474Q6S9Z5 364 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-233ENST00000642021 MMD2Q8IY49 270 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 OR1L6Q8NGR2 347 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 ENY2Q9NPA8 101 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 TMEM106BQ9NUM4 274 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 SLC45A2Q9UMX9 530 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 RNF24Q9Y225 148 aa11.31□□□□□ -0.6
PHGDH-233ENST00000642021 PLCE1Q9P212 2302 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 C9JCJ5 164 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 J3QR06 171 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 CRISP2P16562 243 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 RAB31Q13636 194 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 DOLPP1Q86YN1 238 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 ZNF439Q8NDP4 499 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 ST6GALNAC3Q8NDV1 305 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 RNASE8Q8TDE3 154 aaKnown RBP11.3□□□□□ -0.6
PHGDH-233ENST00000642021 NABP2Q9BQ15 211 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 CHODLQ9H9P2 273 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 MGAQ8IWI9 3026 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 KIR2DL5BA0A0G2JN68 375 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 KIR2DL5BA0A0G2JPC4 375 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 FCN1O00602 326 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 OR10J1P30954 320 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 S100A7P31151 101 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 C22orf34Q6ZV56 151 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 OR8I2Q8N0Y5 310 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 KIR2DL5AQ8N109 375 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 RNASE7Q9H1E1 156 aaKnown RBP11.3□□□□□ -0.6
PHGDH-233ENST00000642021 DMXL1Q9Y485 3027 aa11.3□□□□□ -0.6
PHGDH-233ENST00000642021 CDKN1AP38936 164 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 KLF3P57682 345 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-233ENST00000642021 CENPWQ5EE01 88 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 PQLC2Q6ZP29 291 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 UHRF2Q96PU4 802 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 CCL13Q99616 98 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 HELTA6NFD8 242 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 SNURFLB1AK76 121 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 OR10J4P0C629 311 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 CT45A6P0DMU7 189 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 CT45A5P0DMU8 189 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 CT45A7P0DMV0 189 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 AREGP15514 252 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 SLC35B1P78383 322 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 ASPHD1Q5U4P2 390 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 GCM1Q9NP62 436 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 RNF114Q9Y508 228 aa11.29□□□□□ -0.6
PHGDH-233ENST00000642021 MT-CO2P00403 227 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 GLRXP35754 106 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 FXYD3Q14802 87 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 TPTE2P1Q5T6R2 138 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 C1orf174Q8IYL3 243 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 FAM216BQ8N7L0 139 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 FAM169BQ8N8A8 192 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 HSPB9Q9BQS6 159 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 CACNA1HO95180 2353 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 GGTLC3B5MD39 225 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 POU2AF1Q16633 256 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 RPEL1Q2QD12 228 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 TOMM20LQ6UXN7 152 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.28□□□□□ -0.6
PHGDH-233ENST00000642021 OR10W1Q8NGF6 305 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 OR9G1Q8NH87 305 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 LY96Q9Y6Y9 160 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 ARFGEF3Q5TH69 2177 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 TEX50A0A1B0GTY4 177 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 UPK2O00526 184 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 ESDP10768 282 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 CDKN1BP46527 198 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 GNG4P50150 75 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 FAM222BQ8WU58 562 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 RND1Q92730 232 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 GAFA1Q96PS6 74 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 PLEKHA3Q9HB20 300 aa11.28□□□□□ -0.6
PHGDH-233ENST00000642021 DSCAML1Q8TD84 2053 aa11.27□□□□□ -0.6
PHGDH-233ENST00000642021 OR7C2O60412 319 aa11.27□□□□□ -0.61
PHGDH-233ENST00000642021 TPPP2P59282 170 aa11.27□□□□□ -0.61
PHGDH-233ENST00000642021 PRCDQ00LT1 54 aa11.27□□□□□ -0.61
PHGDH-233ENST00000642021 KIAA1644Q3SXP7 199 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms