RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 DHRS2Q13268 280 aa13.98□□□□□ -0.17
VPS72-207ENST00000640458 TATDN3Q17R31 274 aa13.98□□□□□ -0.17
VPS72-207ENST00000640458 SP6Q3SY56 376 aa13.98□□□□□ -0.17
VPS72-207ENST00000640458 DMBX1Q8NFW5 382 aa13.98□□□□□ -0.17
VPS72-207ENST00000640458 ZNF431Q8TF32 576 aaPredicted RBP13.98□□□□□ -0.17
VPS72-207ENST00000640458 FYTTD1Q96QD9 318 aaKnown RBP13.98□□□□□ -0.17
VPS72-207ENST00000640458 TP53RKQ96S44 253 aa13.98□□□□□ -0.17
VPS72-207ENST00000640458 TMEM222Q9H0R3 208 aa13.98□□□□□ -0.17
VPS72-207ENST00000640458 HUWE1Q7Z6Z7 4374 aaKnown RBP13.98□□□□□ -0.17
VPS72-207ENST00000640458 TRBV9A0A0B4J1U6 114 aa13.97□□□□□ -0.17
VPS72-207ENST00000640458 NPIPB5A8MRT5 1133 aa13.97□□□□□ -0.17
VPS72-207ENST00000640458 SEC14L6B5MCN3 397 aa13.97□□□□□ -0.17
VPS72-207ENST00000640458 OVOL1O14753 267 aa13.97□□□□□ -0.17
VPS72-207ENST00000640458 RBMXL2O75526 392 aaKnown RBP13.97□□□□□ -0.17
VPS72-207ENST00000640458 MYOD1P15172 320 aa13.97□□□□□ -0.17
VPS72-207ENST00000640458 UCP1P25874 307 aa13.97□□□□□ -0.17
VPS72-207ENST00000640458 SLURP1P55000 103 aa13.97□□□□□ -0.17
VPS72-207ENST00000640458 ERVK-16P61578 105 aa13.97□□□□□ -0.17
VPS72-207ENST00000640458 RNASE11Q8TAA1 199 aaKnown RBP13.97□□□□□ -0.17
VPS72-207ENST00000640458 DLX4Q92988 240 aaPredicted RBP13.97□□□□□ -0.17
VPS72-207ENST00000640458 SEC22CQ9BRL7 303 aa13.97□□□□□ -0.17
VPS72-207ENST00000640458 RANGRFQ9HD47 186 aaPredicted RBP13.97□□□□□ -0.17
VPS72-207ENST00000640458 ZNF256Q9Y2P7 627 aaPredicted RBP13.97□□□□□ -0.17
VPS72-207ENST00000640458 ZNF257Q9Y2Q1 563 aa13.97□□□□□ -0.17
VPS72-207ENST00000640458 CGB1A6NKQ9 187 aa13.96□□□□□ -0.17
VPS72-207ENST00000640458 FAM223BA6NKX1 122 aa13.96□□□□□ -0.17
VPS72-207ENST00000640458 MARCH11A6NNE9 402 aa13.96□□□□□ -0.17
VPS72-207ENST00000640458 PRH1P02810 166 aa13.96□□□□□ -0.17
VPS72-207ENST00000640458 CRYGCP07315 174 aa13.96□□□□□ -0.17
VPS72-207ENST00000640458 OR2B8PP59922 312 aa13.96□□□□□ -0.17
VPS72-207ENST00000640458 SUPT4H1P63272 117 aaKnown RBP13.96□□□□□ -0.17
VPS72-207ENST00000640458 DEFA5Q01523 94 aa13.96□□□□□ -0.17
VPS72-207ENST00000640458 TMEM187Q14656 261 aa13.96□□□□□ -0.17
VPS72-207ENST00000640458 ZNF343Q6P1L6 599 aa13.96□□□□□ -0.17
VPS72-207ENST00000640458 FAM223AQ8IWN6 122 aa13.96□□□□□ -0.17
VPS72-207ENST00000640458 C12orf45Q8N5I9 185 aaPredicted RBP13.96□□□□□ -0.17
VPS72-207ENST00000640458 UXS1Q8NBZ7 420 aa13.96□□□□□ -0.17
VPS72-207ENST00000640458 GLYATL2Q8WU03 294 aa13.96□□□□□ -0.17
VPS72-207ENST00000640458 IL22RA2Q969J5 263 aa13.96□□□□□ -0.17
VPS72-207ENST00000640458 LYSTQ99698 3801 aa13.96□□□□□ -0.17
VPS72-207ENST00000640458 A0A0B4J2A0 478 aa13.95□□□□□ -0.18
VPS72-207ENST00000640458 DUXBA0A1W2PPF3 345 aa13.95□□□□□ -0.18
VPS72-207ENST00000640458 SSNA1O43805 119 aa13.95□□□□□ -0.18
VPS72-207ENST00000640458 CDS2O95674 445 aa13.95□□□□□ -0.18
VPS72-207ENST00000640458 KRASP01116 189 aa13.95□□□□□ -0.18
VPS72-207ENST00000640458 IFNA21P01568 189 aa13.95□□□□□ -0.18
VPS72-207ENST00000640458 PSMB6P28072 239 aa13.95□□□□□ -0.18
VPS72-207ENST00000640458 RHOGP84095 191 aa13.95□□□□□ -0.18
VPS72-207ENST00000640458 KLK9Q2XQG4 91 aa13.95□□□□□ -0.18
VPS72-207ENST00000640458 MITD1Q8WV92 249 aa13.95□□□□□ -0.18
VPS72-207ENST00000640458 RBPMSQ93062 196 aaKnown RBP13.95□□□□□ -0.18
VPS72-207ENST00000640458 RRNAD1Q96FB5 475 aaKnown RBP13.95□□□□□ -0.18
VPS72-207ENST00000640458 SRSF8Q9BRL6 282 aaKnown RBP13.95□□□□□ -0.18
VPS72-207ENST00000640458 COMMD5Q9GZQ3 224 aa13.95□□□□□ -0.18
VPS72-207ENST00000640458 PEF1Q9UBV8 284 aaKnown RBP13.95□□□□□ -0.18
VPS72-207ENST00000640458 SHPKQ9UHJ6 478 aa13.95□□□□□ -0.18
VPS72-207ENST00000640458 KLK9Q9UKQ9 250 aa13.95□□□□□ -0.18
VPS72-207ENST00000640458 ANKRD34BA5PLL1 514 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 AREGP15514 252 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 CTRB1P17538 263 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 ZP3P21754 424 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 G6PCP35575 357 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 INSL3P51460 131 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 AKR1C2P52895 323 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 ATP5G2Q06055 141 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 TMEM268Q5VZI3 342 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 CTRB2Q6GPI1 263 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 NECAP1Q8NC96 275 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 OR52B4Q8NGK2 314 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 TMEM56Q96MV1 263 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 CITED4Q96RK1 184 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 ZMAT4Q9H898 229 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 ALG5Q9Y673 324 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 TMEM56-RWDD3S4R434 201 aa13.94□□□□□ -0.18
VPS72-207ENST00000640458 C7orf66A4D0T2 115 aa13.93□□□□□ -0.18
VPS72-207ENST00000640458 LRTM2Q8N967 370 aa13.93□□□□□ -0.18
VPS72-207ENST00000640458 FANCD2OSQ96PS1 177 aa13.93□□□□□ -0.18
VPS72-207ENST00000640458 TEX50A0A1B0GTY4 177 aa13.92□□□□□ -0.18
VPS72-207ENST00000640458 SNAPC5O75971 98 aa13.92□□□□□ -0.18
VPS72-207ENST00000640458 OR2J3O76001 311 aa13.92□□□□□ -0.18
VPS72-207ENST00000640458 IGKV1-39P01597 117 aa13.92□□□□□ -0.18
VPS72-207ENST00000640458 IGKV1D-39P04432 117 aa13.92□□□□□ -0.18
VPS72-207ENST00000640458 THOC7Q6I9Y2 204 aaKnown RBP13.92□□□□□ -0.18
VPS72-207ENST00000640458 Q6ZNX1 250 aa13.92□□□□□ -0.18
VPS72-207ENST00000640458 C19orf35Q6ZS72 473 aa13.92□□□□□ -0.18
VPS72-207ENST00000640458 H2BFWTQ7Z2G1 175 aa13.92□□□□□ -0.18
VPS72-207ENST00000640458 ZNF429Q86V71 674 aa13.92□□□□□ -0.18
VPS72-207ENST00000640458 FAM219AQ8IW50 185 aa13.92□□□□□ -0.18
VPS72-207ENST00000640458 SELENOHQ8IZQ5 122 aaKnown RBP13.92□□□□□ -0.18
VPS72-207ENST00000640458 SEC22AQ96IW7 307 aa13.92□□□□□ -0.18
VPS72-207ENST00000640458 QTRT1Q9BXR0 403 aaKnown RBP13.92□□□□□ -0.18
VPS72-207ENST00000640458 MED28Q9H204 178 aa13.92□□□□□ -0.18
VPS72-207ENST00000640458 TMED3Q9Y3Q3 217 aa13.92□□□□□ -0.18
VPS72-207ENST00000640458 SORL1Q92673 2214 aa13.92□□□□□ -0.18
VPS72-207ENST00000640458 IGLC7A0M8Q6 106 aa13.91□□□□□ -0.18
VPS72-207ENST00000640458 TRBV12-3P01733 135 aa13.91□□□□□ -0.18
VPS72-207ENST00000640458 TRAPPC2P0DI81 140 aa13.91□□□□□ -0.18
VPS72-207ENST00000640458 TRAPPC2BP0DI82 140 aa13.91□□□□□ -0.18
VPS72-207ENST00000640458 HIST1H1BP16401 226 aaKnown RBP13.91□□□□□ -0.18
VPS72-207ENST00000640458 EXOSC2Q13868 293 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms