RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ZNF98A6NK75 572 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 NDUFS7O75251 213 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 STAG3L2P0CL84 134 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 STAG3L3P0CL85 134 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 REG1BP48304 166 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 ATP5IP56385 69 aaPredicted RBP12.23□□□□□ -0.45
TRIM3-215ENST00000639856 RAB31Q13636 194 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 SSMEM1Q8WWF3 244 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 A0A087X0M5 115 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 A0A1B0GX30 115 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 RPL29P47914 159 aaKnown RBP12.22□□□□□ -0.45
TRIM3-215ENST00000639856 DLX1P56177 255 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 RPL23P62829 140 aaKnown RBP12.22□□□□□ -0.45
TRIM3-215ENST00000639856 PRB3Q04118 309 aaPredicted RBP12.22□□□□□ -0.45
TRIM3-215ENST00000639856 FABP9Q0Z7S8 132 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 BSXQ3C1V8 233 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 C11orf42Q8N5U0 333 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 ST6GALNAC6Q969X2 333 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 FLYWCH2Q96CP2 140 aaKnown RBP12.22□□□□□ -0.45
TRIM3-215ENST00000639856 ARHGAP32A7KAX9 2087 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 AP4M1O00189 453 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 PDE6DO43924 150 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 FSTL3O95633 263 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 CXorf1O96002 111 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 ARL14EPLP0DKL9 152 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 ZNF137PP52743 207 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 C2orf83Q53S99 150 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 SPNS3Q6ZMD2 512 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 PDPNQ86YL7 162 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 STPG3Q8N7X2 389 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 OR4C13Q8NGP0 309 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 ABHD5Q8WTS1 349 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 NEU4Q8WWR8 484 aaPredicted RBP12.22□□□□□ -0.45
TRIM3-215ENST00000639856 NABP2Q9BQ15 211 aa12.22□□□□□ -0.45
TRIM3-215ENST00000639856 UTP20O75691 2785 aaKnown RBP12.21□□□□□ -0.45
TRIM3-215ENST00000639856 A6NNC1 897 aa12.21□□□□□ -0.45
TRIM3-215ENST00000639856 OR1L8Q8NGR8 309 aa12.21□□□□□ -0.45
TRIM3-215ENST00000639856 OR9G1Q8NH87 305 aa12.21□□□□□ -0.45
TRIM3-215ENST00000639856 C12orf57Q99622 126 aa12.21□□□□□ -0.45
TRIM3-215ENST00000639856 SSX3Q99909 188 aa12.21□□□□□ -0.45
TRIM3-215ENST00000639856 IGHV1-8P0DP01 117 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 USF1P22415 310 aaPredicted RBP12.2□□□□□ -0.46
TRIM3-215ENST00000639856 NPPCP23582 126 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 UBE2G2P60604 165 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 RPL8P62917 257 aaKnown RBP12.2□□□□□ -0.46
TRIM3-215ENST00000639856 PRR20EP86478 221 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 PRR20CP86479 221 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 PRR20DP86480 221 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 PRR20BP86481 221 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 PRR20AP86496 221 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 DIAPH2-AS1Q14236 149 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 FAM210BQ96KR6 192 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 COMMD5Q9GZQ3 224 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 NDUFA4L2Q9NRX3 87 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 TRBV24-1A0A075B6N3 115 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 TRBV23-1A0A0A0MS06 115 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 RNASE2P10153 161 aaKnown RBP12.2□□□□□ -0.46
TRIM3-215ENST00000639856 ATP5G3P48201 142 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 RHOBP62745 196 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 KIAA0141Q14154 515 aaPredicted RBP12.2□□□□□ -0.46
TRIM3-215ENST00000639856 CST9LP1Q5W188 147 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 TMEM144Q7Z5S9 345 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 VSTM2AQ8TAG5 236 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 TXNDC17Q9BRA2 123 aa12.2□□□□□ -0.46
TRIM3-215ENST00000639856 VENTXO95231 258 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 S100A8P05109 93 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 MEOX2P50222 304 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 C16orf82Q7Z2V1 217 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 OR10W1Q8NGF6 305 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 OR8B3Q8NGG8 313 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 OR51G1Q8NGK1 321 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 OR4A5Q8NH83 315 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 TMEM167AQ8TBQ9 72 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 OR8B2Q96RD0 313 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 PCGF1Q9BSM1 259 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 SEPSECSQ9HD40 501 aaKnown RBP12.19□□□□□ -0.46
TRIM3-215ENST00000639856 WASHC3Q9Y3C0 194 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 ASH1LQ9NR48 2969 aaKnown RBP12.19□□□□□ -0.46
TRIM3-215ENST00000639856 F6UZH7 168 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 INS-IGF2F8WCM5 200 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 GNB1P62873 340 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 TGIF2LXQ8IUE1 241 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 NANPQ8TBE9 248 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 TIMD4Q96H15 378 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 CHODLQ9H9P2 273 aa12.19□□□□□ -0.46
TRIM3-215ENST00000639856 LINC00869P0C866 280 aa12.18□□□□□ -0.46
TRIM3-215ENST00000639856 MOB3BQ86TA1 216 aa12.18□□□□□ -0.46
TRIM3-215ENST00000639856 TMEM133Q9H2Q1 129 aa12.18□□□□□ -0.46
TRIM3-215ENST00000639856 MIOXQ9UGB7 285 aa12.18□□□□□ -0.46
TRIM3-215ENST00000639856 SLC45A2Q9UMX9 530 aa12.18□□□□□ -0.46
TRIM3-215ENST00000639856 IGKV1OR2-108A0A075B7D4 117 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 PPIAL4CA0A0B4J2A2 164 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 C22orf46C9J442 243 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 TGOLN2O43493 480 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 TRGC2P03986 189 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 PPIAL4GP0DN37 164 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 MC5RP33032 325 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 ERHP84090 104 aaKnown RBP12.17□□□□□ -0.46
TRIM3-215ENST00000639856 GAMTQ14353 236 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 A0A1W2PN81 502 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms