RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 PRCDQ00LT1 54 aa16.67■□□□□ 0.26
SCN1B-206ENST00000638536 DHODHQ02127 395 aa16.67■□□□□ 0.26
SCN1B-206ENST00000638536 ACSM6Q6P461 480 aa16.67■□□□□ 0.26
SCN1B-206ENST00000638536 ZNF429Q86V71 674 aa16.67■□□□□ 0.26
SCN1B-206ENST00000638536 DEDD2Q8WXF8 326 aa16.67■□□□□ 0.26
SCN1B-206ENST00000638536 F11RQ9Y624 299 aaKnown RBP16.67■□□□□ 0.26
SCN1B-206ENST00000638536 IGHV3-21A0A0B4J1V1 117 aa16.66■□□□□ 0.26
SCN1B-206ENST00000638536 HIST1H1BP16401 226 aaKnown RBP16.66■□□□□ 0.26
SCN1B-206ENST00000638536 ZP3P21754 424 aa16.66■□□□□ 0.26
SCN1B-206ENST00000638536 BTCP35070 178 aa16.66■□□□□ 0.26
SCN1B-206ENST00000638536 MECP2P51608 486 aaKnown RBP16.66■□□□□ 0.26
SCN1B-206ENST00000638536 SYNJ2BPP57105 145 aa16.66■□□□□ 0.26
SCN1B-206ENST00000638536 SLC25A24Q6NUK1 477 aa16.66■□□□□ 0.26
SCN1B-206ENST00000638536 CLEC19AQ6UXS0 136 aa16.66■□□□□ 0.26
SCN1B-206ENST00000638536 GPR146Q96CH1 333 aa16.66■□□□□ 0.26
SCN1B-206ENST00000638536 RRNAD1Q96FB5 475 aaKnown RBP16.66■□□□□ 0.26
SCN1B-206ENST00000638536 INPP1P49441 399 aa16.65■□□□□ 0.26
SCN1B-206ENST00000638536 HSD17B13Q7Z5P4 300 aaPredicted RBP16.65■□□□□ 0.26
SCN1B-206ENST00000638536 HAPLN4Q86UW8 402 aa16.65■□□□□ 0.26
SCN1B-206ENST00000638536 OR2C3Q8N628 320 aa16.65■□□□□ 0.26
SCN1B-206ENST00000638536 SLC35G3Q8N808 338 aa16.65■□□□□ 0.26
SCN1B-206ENST00000638536 GPR61Q9BZJ8 451 aa16.65■□□□□ 0.26
SCN1B-206ENST00000638536 K7EIL1 84 aa16.64■□□□□ 0.25
SCN1B-206ENST00000638536 SAP30O75446 220 aa16.64■□□□□ 0.25
SCN1B-206ENST00000638536 ATG12O94817 140 aa16.64■□□□□ 0.25
SCN1B-206ENST00000638536 RPEL1Q2QD12 228 aa16.64■□□□□ 0.25
SCN1B-206ENST00000638536 IL34Q6ZMJ4 242 aa16.64■□□□□ 0.25
SCN1B-206ENST00000638536 RNASE11Q8TAA1 199 aaKnown RBP16.64■□□□□ 0.25
SCN1B-206ENST00000638536 SLC25A21Q9BQT8 299 aaPredicted RBP16.64■□□□□ 0.25
SCN1B-206ENST00000638536 ZC4H2Q9NQZ6 224 aa16.64■□□□□ 0.25
SCN1B-206ENST00000638536 KCNIP3Q9Y2W7 256 aa16.64■□□□□ 0.25
SCN1B-206ENST00000638536 PLA2G10O15496 165 aa16.63■□□□□ 0.25
SCN1B-206ENST00000638536 FLVCR2Q9UPI3 526 aa16.63■□□□□ 0.25
SCN1B-206ENST00000638536 OR2C1O95371 312 aa16.63■□□□□ 0.25
SCN1B-206ENST00000638536 LYZL2Q7Z4W2 148 aa16.63■□□□□ 0.25
SCN1B-206ENST00000638536 ZNF502Q8TBZ5 544 aa16.63■□□□□ 0.25
SCN1B-206ENST00000638536 EEF1AKMT3Q96AZ1 226 aa16.63■□□□□ 0.25
SCN1B-206ENST00000638536 CACNG5Q9UF02 275 aa16.63■□□□□ 0.25
SCN1B-206ENST00000638536 IFNA17P01571 189 aa16.62■□□□□ 0.25
SCN1B-206ENST00000638536 CLEC3BP05452 202 aa16.62■□□□□ 0.25
SCN1B-206ENST00000638536 TMEM128Q5BJH2 165 aa16.62■□□□□ 0.25
SCN1B-206ENST00000638536 OR9G4Q8NGQ1 327 aa16.62■□□□□ 0.25
SCN1B-206ENST00000638536 PLEKHA3Q9HB20 300 aa16.62■□□□□ 0.25
SCN1B-206ENST00000638536 DNAH9Q9NYC9 4486 aa16.61■□□□□ 0.25
SCN1B-206ENST00000638536 K7EIM0 57 aa16.61■□□□□ 0.25
SCN1B-206ENST00000638536 EDN2P20800 178 aa16.61■□□□□ 0.25
SCN1B-206ENST00000638536 PPP1R1AQ13522 171 aa16.61■□□□□ 0.25
SCN1B-206ENST00000638536 RBMS2Q15434 407 aaKnown RBP16.61■□□□□ 0.25
SCN1B-206ENST00000638536 ANKRD55Q3KP44 614 aa16.61■□□□□ 0.25
SCN1B-206ENST00000638536 C11orf87Q6NUJ2 197 aa16.61■□□□□ 0.25
SCN1B-206ENST00000638536 REC114Q7Z4M0 266 aa16.61■□□□□ 0.25
SCN1B-206ENST00000638536 FAM219AQ8IW50 185 aa16.61■□□□□ 0.25
SCN1B-206ENST00000638536 OR1P1Q8NH06 330 aa16.61■□□□□ 0.25
SCN1B-206ENST00000638536 MRAPQ8TCY5 172 aa16.61■□□□□ 0.25
SCN1B-206ENST00000638536 IL22RA2Q969J5 263 aa16.61■□□□□ 0.25
SCN1B-206ENST00000638536 NAP1L6A6NFF2 107 aa16.6■□□□□ 0.25
SCN1B-206ENST00000638536 F8W735 103 aaPredicted RBP16.6■□□□□ 0.25
SCN1B-206ENST00000638536 NDUFB6O95139 128 aa16.6■□□□□ 0.25
SCN1B-206ENST00000638536 NXPH3O95157 252 aa16.6■□□□□ 0.25
SCN1B-206ENST00000638536 ARL3P36405 182 aa16.6■□□□□ 0.25
SCN1B-206ENST00000638536 INSL3P51460 131 aa16.6■□□□□ 0.25
SCN1B-206ENST00000638536 AARDQ4LEZ3 155 aa16.6■□□□□ 0.25
SCN1B-206ENST00000638536 SCARB1Q8WTV0 552 aa16.6■□□□□ 0.25
SCN1B-206ENST00000638536 CXorf58Q96LI9 332 aa16.6■□□□□ 0.25
SCN1B-206ENST00000638536 PRR25Q96S07 402 aa16.6■□□□□ 0.25
SCN1B-206ENST00000638536 THYN1Q9P016 225 aa16.6■□□□□ 0.25
SCN1B-206ENST00000638536 TRBV7-1A0A0A6YYK4 115 aa16.59■□□□□ 0.25
SCN1B-206ENST00000638536 VAMP1P23763 118 aa16.59■□□□□ 0.25
SCN1B-206ENST00000638536 GPR183P32249 361 aa16.59■□□□□ 0.25
SCN1B-206ENST00000638536 NMSQ5H8A3 153 aa16.59■□□□□ 0.25
SCN1B-206ENST00000638536 CENPSQ8N2Z9 138 aa16.59■□□□□ 0.25
SCN1B-206ENST00000638536 ZNF114Q8NC26 417 aa16.59■□□□□ 0.25
SCN1B-206ENST00000638536 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.59■□□□□ 0.25
SCN1B-206ENST00000638536 A0A0B4J2A0 478 aa16.59■□□□□ 0.25
SCN1B-206ENST00000638536 GGCTO75223 188 aaKnown RBP16.59■□□□□ 0.25
SCN1B-206ENST00000638536 IGHV3-48P01763 117 aa16.59■□□□□ 0.25
SCN1B-206ENST00000638536 CSN3P07498 182 aa16.59■□□□□ 0.25
SCN1B-206ENST00000638536 ADAMTSL5Q6ZMM2 481 aa16.59■□□□□ 0.25
SCN1B-206ENST00000638536 VN1R17PQ8TDU5 208 aa16.59■□□□□ 0.25
SCN1B-206ENST00000638536 MISP3Q96FF7 219 aa16.59■□□□□ 0.25
SCN1B-206ENST00000638536 PTTG2Q9NZH5 202 aa16.59■□□□□ 0.25
SCN1B-206ENST00000638536 SHPKQ9UHJ6 478 aa16.59■□□□□ 0.25
SCN1B-206ENST00000638536 IGHV3-35A0A0C4DH35 117 aa16.58■□□□□ 0.24
SCN1B-206ENST00000638536 ERHP84090 104 aaKnown RBP16.58■□□□□ 0.24
SCN1B-206ENST00000638536 LINC00299Q6ZSB3 139 aa16.58■□□□□ 0.24
SCN1B-206ENST00000638536 LGI3Q8N145 548 aa16.58■□□□□ 0.24
SCN1B-206ENST00000638536 OR4C12Q96R67 309 aa16.58■□□□□ 0.24
SCN1B-206ENST00000638536 PDCD10Q9BUL8 212 aa16.58■□□□□ 0.24
SCN1B-206ENST00000638536 INS-IGF2F8WCM5 200 aa16.57■□□□□ 0.24
SCN1B-206ENST00000638536 I3L2K1 104 aa16.57■□□□□ 0.24
SCN1B-206ENST00000638536 SFT2D2O95562 160 aa16.57■□□□□ 0.24
SCN1B-206ENST00000638536 ANXA3P12429 323 aa16.57■□□□□ 0.24
SCN1B-206ENST00000638536 SPNP16150 400 aa16.57■□□□□ 0.24
SCN1B-206ENST00000638536 HOXA1P49639 335 aaPredicted RBP16.57■□□□□ 0.24
SCN1B-206ENST00000638536 COL7A1Q02388 2944 aa16.57■□□□□ 0.24
SCN1B-206ENST00000638536 OR2T8A6NH00 312 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 RNASE2P10153 161 aaKnown RBP16.56■□□□□ 0.24
SCN1B-206ENST00000638536 SPCS3P61009 180 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 C7orf50Q9BRJ6 194 aaKnown RBP16.56■□□□□ 0.24
SCN1B-206ENST00000638536 ELOVL1Q9BW60 279 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms