RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 SP6Q3SY56 376 aa13.32□□□□□ -0.28
PNKP-230ENST00000638016 SCGB2B2Q4G0G5 96 aa13.32□□□□□ -0.28
PNKP-230ENST00000638016 CADM3Q8N126 398 aa13.32□□□□□ -0.28
PNKP-230ENST00000638016 ARRDC1Q8N5I2 433 aa13.32□□□□□ -0.28
PNKP-230ENST00000638016 TMEM229BQ8NBD8 167 aa13.32□□□□□ -0.28
PNKP-230ENST00000638016 UBAC2Q8NBM4 344 aa13.32□□□□□ -0.28
PNKP-230ENST00000638016 OR13C8Q8NGS7 320 aa13.32□□□□□ -0.28
PNKP-230ENST00000638016 OR5B3Q8NH48 314 aa13.32□□□□□ -0.28
PNKP-230ENST00000638016 VN1R17PQ8TDU5 208 aa13.32□□□□□ -0.28
PNKP-230ENST00000638016 FAM212BQ9NTI7 297 aaPredicted RBP13.32□□□□□ -0.28
PNKP-230ENST00000638016 THYN1Q9P016 225 aa13.32□□□□□ -0.28
PNKP-230ENST00000638016 STARD9Q9P2P6 4700 aa13.31□□□□□ -0.28
PNKP-230ENST00000638016 RAB3DO95716 219 aa13.31□□□□□ -0.28
PNKP-230ENST00000638016 IGHV3-48P01763 117 aa13.31□□□□□ -0.28
PNKP-230ENST00000638016 ADMP35318 185 aa13.31□□□□□ -0.28
PNKP-230ENST00000638016 ZNF57Q68EA5 555 aaPredicted RBP13.31□□□□□ -0.28
PNKP-230ENST00000638016 STEAP1BQ6NZ63 245 aa13.31□□□□□ -0.28
PNKP-230ENST00000638016 HSD17B13Q7Z5P4 300 aaPredicted RBP13.31□□□□□ -0.28
PNKP-230ENST00000638016 MARCH1Q8TCQ1 289 aa13.31□□□□□ -0.28
PNKP-230ENST00000638016 TSC22D3Q99576 134 aa13.31□□□□□ -0.28
PNKP-230ENST00000638016 ZNF436Q9C0F3 470 aaPredicted RBP13.31□□□□□ -0.28
PNKP-230ENST00000638016 C21orf62Q9NYP8 219 aa13.31□□□□□ -0.28
PNKP-230ENST00000638016 TECRQ9NZ01 308 aaKnown RBP13.31□□□□□ -0.28
PNKP-230ENST00000638016 SACSQ9NZJ4 4579 aa13.3□□□□□ -0.28
PNKP-230ENST00000638016 A0A0G2JRQ6 117 aa13.3□□□□□ -0.28
PNKP-230ENST00000638016 RBMY1BA6NDE4 496 aaKnown RBP13.3□□□□□ -0.28
PNKP-230ENST00000638016 RBMY1EA6NEQ0 496 aaKnown RBP13.3□□□□□ -0.28
PNKP-230ENST00000638016 GABARAPH6UMI1 98 aa13.3□□□□□ -0.28
PNKP-230ENST00000638016 ZNF207O43670 478 aaKnown RBP13.3□□□□□ -0.28
PNKP-230ENST00000638016 TPPPO94811 219 aa13.3□□□□□ -0.28
PNKP-230ENST00000638016 RBMY1DP0C7P1 496 aaKnown RBP13.3□□□□□ -0.28
PNKP-230ENST00000638016 TAS2R19P59542 299 aa13.3□□□□□ -0.28
PNKP-230ENST00000638016 OR2C3Q8N628 320 aa13.3□□□□□ -0.28
PNKP-230ENST00000638016 OR4A16Q8NH70 328 aa13.3□□□□□ -0.28
PNKP-230ENST00000638016 MUC7Q8TAX7 377 aa13.3□□□□□ -0.28
PNKP-230ENST00000638016 RAB2BQ8WUD1 216 aa13.3□□□□□ -0.28
PNKP-230ENST00000638016 TMEM190Q8WZ59 177 aa13.3□□□□□ -0.28
PNKP-230ENST00000638016 MISP3Q96FF7 219 aa13.3□□□□□ -0.28
PNKP-230ENST00000638016 TMEM56Q96MV1 263 aa13.3□□□□□ -0.28
PNKP-230ENST00000638016 FAM110AQ9BQ89 295 aa13.3□□□□□ -0.28
PNKP-230ENST00000638016 SRD5A3Q9H8P0 318 aa13.3□□□□□ -0.28
PNKP-230ENST00000638016 C3orf85A0A1B0GTC6 90 aa13.29□□□□□ -0.28
PNKP-230ENST00000638016 OR11H12B2RN74 326 aa13.29□□□□□ -0.28
PNKP-230ENST00000638016 P0C879 139 aa13.29□□□□□ -0.28
PNKP-230ENST00000638016 TBPP20226 339 aa13.29□□□□□ -0.28
PNKP-230ENST00000638016 PRCDQ00LT1 54 aa13.29□□□□□ -0.28
PNKP-230ENST00000638016 Q56UQ5 140 aa13.29□□□□□ -0.28
PNKP-230ENST00000638016 LINC00322Q6ZN03 302 aaPredicted RBP13.29□□□□□ -0.28
PNKP-230ENST00000638016 TERB2Q8NHR7 220 aa13.29□□□□□ -0.28
PNKP-230ENST00000638016 SMIM4Q8WVI0 70 aa13.29□□□□□ -0.28
PNKP-230ENST00000638016 DIRAS2Q96HU8 199 aa13.29□□□□□ -0.28
PNKP-230ENST00000638016 C6orf62Q9GZU0 229 aaPredicted RBP13.29□□□□□ -0.28
PNKP-230ENST00000638016 SLC2A8Q9NY64 477 aa13.29□□□□□ -0.28
PNKP-230ENST00000638016 FKBP11Q9NYL4 201 aa13.29□□□□□ -0.28
PNKP-230ENST00000638016 CCDC59Q9P031 241 aaKnown RBP13.29□□□□□ -0.28
PNKP-230ENST00000638016 CEPT1Q9Y6K0 416 aa13.29□□□□□ -0.28
PNKP-230ENST00000638016 A0A0B4J293 547 aa13.28□□□□□ -0.28
PNKP-230ENST00000638016 H3BMQ9 156 aa13.28□□□□□ -0.28
PNKP-230ENST00000638016 C8orf88P0DMB2 117 aa13.28□□□□□ -0.28
PNKP-230ENST00000638016 AKR1C2P52895 323 aa13.28□□□□□ -0.28
PNKP-230ENST00000638016 IL18Q14116 193 aa13.28□□□□□ -0.28
PNKP-230ENST00000638016 OR4C16Q8NGL9 310 aa13.28□□□□□ -0.28
PNKP-230ENST00000638016 OR1P1Q8NH06 330 aa13.28□□□□□ -0.28
PNKP-230ENST00000638016 BSCL2Q96G97 398 aaPredicted RBP13.28□□□□□ -0.28
PNKP-230ENST00000638016 ZNF486Q96H40 463 aaPredicted RBP13.28□□□□□ -0.28
PNKP-230ENST00000638016 CITED4Q96RK1 184 aa13.28□□□□□ -0.28
PNKP-230ENST00000638016 SPATA25Q9BR10 227 aa13.28□□□□□ -0.28
PNKP-230ENST00000638016 C20orf24Q9BUV8 137 aa13.28□□□□□ -0.28
PNKP-230ENST00000638016 EDA2RQ9HAV5 297 aa13.28□□□□□ -0.28
PNKP-230ENST00000638016 COPZ2Q9P299 210 aa13.28□□□□□ -0.28
PNKP-230ENST00000638016 I3L2K1 104 aa13.27□□□□□ -0.29
PNKP-230ENST00000638016 CYB5BO43169 146 aa13.27□□□□□ -0.29
PNKP-230ENST00000638016 TMBIM6P55061 237 aa13.27□□□□□ -0.29
PNKP-230ENST00000638016 HSPE1P61604 102 aaKnown RBP13.27□□□□□ -0.29
PNKP-230ENST00000638016 TRIM16LQ309B1 348 aa13.27□□□□□ -0.29
PNKP-230ENST00000638016 LHFPL5Q8TAF8 219 aa13.27□□□□□ -0.29
PNKP-230ENST00000638016 PINX1Q96BK5 328 aaKnown RBP13.27□□□□□ -0.29
PNKP-230ENST00000638016 ISOC1Q96CN7 298 aa13.27□□□□□ -0.29
PNKP-230ENST00000638016 RTBDNQ9BSG5 229 aaPredicted RBP13.27□□□□□ -0.29
PNKP-230ENST00000638016 SLIRPQ9GZT3 109 aaKnown RBP13.27□□□□□ -0.29
PNKP-230ENST00000638016 PALMDQ9NP74 551 aa13.27□□□□□ -0.29
PNKP-230ENST00000638016 GAR1Q9NY12 217 aaKnown RBP13.27□□□□□ -0.29
PNKP-230ENST00000638016 UFC1Q9Y3C8 167 aa13.27□□□□□ -0.29
PNKP-230ENST00000638016 C3orf84H3BNL1 204 aa13.26□□□□□ -0.29
PNKP-230ENST00000638016 ST8SIA3O43173 380 aa13.26□□□□□ -0.29
PNKP-230ENST00000638016 MT-CO2P00403 227 aa13.26□□□□□ -0.29
PNKP-230ENST00000638016 CTSDP07339 412 aaPredicted RBP13.26□□□□□ -0.29
PNKP-230ENST00000638016 CTSGP08311 255 aa13.26□□□□□ -0.29
PNKP-230ENST00000638016 OR5AC1P0C628 307 aa13.26□□□□□ -0.29
PNKP-230ENST00000638016 CASC10Q5T4H9 136 aa13.26□□□□□ -0.29
PNKP-230ENST00000638016 ZFAND6Q6FIF0 208 aa13.26□□□□□ -0.29
PNKP-230ENST00000638016 OR52B4Q8NGK2 314 aa13.26□□□□□ -0.29
PNKP-230ENST00000638016 C15orf40Q8WUR7 153 aa13.26□□□□□ -0.29
PNKP-230ENST00000638016 HIPK2Q9H2X6 1198 aa13.26□□□□□ -0.29
PNKP-230ENST00000638016 C5orf66Q9H5L9 145 aa13.26□□□□□ -0.29
PNKP-230ENST00000638016 PRR13Q9NZ81 148 aa13.26□□□□□ -0.29
PNKP-230ENST00000638016 RYR2Q92736 4967 aa13.26□□□□□ -0.29
PNKP-230ENST00000638016 IGHV3-49A0A0A0MS15 119 aa13.25□□□□□ -0.29
PNKP-230ENST00000638016 UCP1P25874 307 aa13.25□□□□□ -0.29
PNKP-230ENST00000638016 RPL5P46777 297 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms