RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 IGKV3-7A0A075B6H7 116 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 EDIL3O43854 480 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 IFITM1P13164 125 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 GPBAR1Q8TDU6 330 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 COX5BP10606 129 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 UCP2P55851 309 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 TMEM187Q14656 261 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 FZR1Q9UM11 496 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 SPINT1O43278 529 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 C6orf106Q9H6K1 298 aaPredicted RBP12.92□□□□□ -0.34
UBE3A-227ENST00000638011 A0A1W2PR80 420 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 F8W1H4 67 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 ZNF708P17019 499 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 VKORC1Q9BQB6 163 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 CHTOPQ9Y3Y2 248 aaKnown RBP12.92□□□□□ -0.34
UBE3A-227ENST00000638011 VWC2LB2RUY7 222 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 TCF20Q9UGU0 1960 aaKnown RBP12.92□□□□□ -0.34
UBE3A-227ENST00000638011 HOXD3P31249 432 aaPredicted RBP12.92□□□□□ -0.34
UBE3A-227ENST00000638011 SONP18583 2426 aaKnown RBP12.92□□□□□ -0.34
UBE3A-227ENST00000638011 H3BMM0 161 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 IL11P20809 199 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 RND2P52198 227 aa12.92□□□□□ -0.34
UBE3A-227ENST00000638011 TRAV12-3A0A0B4J271 114 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 Q96M66 194 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 TCF19Q9Y242 345 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 PPIAL4EA0A075B759 164 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 PPIAL4FP0DN26 164 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 LHX2P50458 406 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 MESP2Q0VG99 397 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 PPIAL4AQ9Y536 164 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 NANOS3P60323 173 aaKnown RBP12.91□□□□□ -0.34
UBE3A-227ENST00000638011 DEFB103AP81534 67 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 LAGE3Q14657 143 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 C2orf82Q6UX34 121 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 FAM19A2Q8N3H0 131 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 TRBV5-7A0A0A0MS05 114 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 TM4SF5O14894 197 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 RNF186Q9NXI6 227 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 IGHV3-13P01766 116 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 IGHV3-7P01780 117 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 FOXA3P55318 350 aaPredicted RBP12.91□□□□□ -0.34
UBE3A-227ENST00000638011 OCIAD2Q56VL3 154 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 BOD1L2Q8IYS8 172 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 MRPL20Q9BYC9 149 aaKnown RBP12.91□□□□□ -0.34
UBE3A-227ENST00000638011 HIST3H2BBQ8N257 126 aa12.91□□□□□ -0.34
UBE3A-227ENST00000638011 ATP5G2Q06055 141 aa12.9□□□□□ -0.34
UBE3A-227ENST00000638011 PRDM14Q9GZV8 571 aa12.9□□□□□ -0.34
UBE3A-227ENST00000638011 PSMB11A5LHX3 300 aa12.9□□□□□ -0.34
UBE3A-227ENST00000638011 SEMA5BQ9P283 1151 aa12.9□□□□□ -0.34
UBE3A-227ENST00000638011 FAM90A9PA6NNJ1 464 aa12.9□□□□□ -0.34
UBE3A-227ENST00000638011 PRRT4C9JH25 899 aa12.9□□□□□ -0.34
UBE3A-227ENST00000638011 PAPPA2Q9BXP8 1791 aa12.9□□□□□ -0.34
UBE3A-227ENST00000638011 LIMS1P48059 325 aa12.9□□□□□ -0.34
UBE3A-227ENST00000638011 DTX2Q86UW9 622 aa12.9□□□□□ -0.34
UBE3A-227ENST00000638011 ST6GALNAC3Q8NDV1 305 aa12.9□□□□□ -0.34
UBE3A-227ENST00000638011 OSR1Q8TAX0 266 aaPredicted RBP12.9□□□□□ -0.34
UBE3A-227ENST00000638011 PATE1Q8WXA2 126 aa12.9□□□□□ -0.34
UBE3A-227ENST00000638011 TRAV1-1A0A0B4J248 108 aa12.9□□□□□ -0.34
UBE3A-227ENST00000638011 DEFB109BQ30KR1 87 aa12.9□□□□□ -0.34
UBE3A-227ENST00000638011 ATP6V0BQ99437 205 aa12.9□□□□□ -0.34
UBE3A-227ENST00000638011 TMEM74BQ9NUR3 256 aa12.9□□□□□ -0.34
UBE3A-227ENST00000638011 TRACP01848 142 aa12.89□□□□□ -0.35
UBE3A-227ENST00000638011 CBLN3Q6UW01 205 aa12.89□□□□□ -0.35
UBE3A-227ENST00000638011 BGLAPP02818 100 aa12.89□□□□□ -0.35
UBE3A-227ENST00000638011 RASL10BQ96S79 203 aa12.89□□□□□ -0.35
UBE3A-227ENST00000638011 ZNF703Q9H7S9 590 aaPredicted RBP12.89□□□□□ -0.35
UBE3A-227ENST00000638011 GPR6P46095 362 aaPredicted RBP12.89□□□□□ -0.35
UBE3A-227ENST00000638011 UNQ9370/PRO34162Q6UXP9 181 aa12.89□□□□□ -0.35
UBE3A-227ENST00000638011 PLEKHB2Q96CS7 222 aa12.89□□□□□ -0.35
UBE3A-227ENST00000638011 MGAMO43451 1857 aa12.89□□□□□ -0.35
UBE3A-227ENST00000638011 ITGB1BP1O14713 200 aa12.89□□□□□ -0.35
UBE3A-227ENST00000638011 DXOO77932 396 aaKnown RBP12.89□□□□□ -0.35
UBE3A-227ENST00000638011 PLAUP00749 431 aa12.89□□□□□ -0.35
UBE3A-227ENST00000638011 IFI27L1Q96BM0 104 aa12.89□□□□□ -0.35
UBE3A-227ENST00000638011 WBP1LQ9NX94 342 aa12.89□□□□□ -0.35
UBE3A-227ENST00000638011 MRPL27Q9P0M9 148 aaKnown RBP12.89□□□□□ -0.35
UBE3A-227ENST00000638011 TOMM40O96008 361 aa12.88□□□□□ -0.35
UBE3A-227ENST00000638011 CCL2P13500 99 aa12.88□□□□□ -0.35
UBE3A-227ENST00000638011 TRAV24A0A0B4J272 114 aa12.88□□□□□ -0.35
UBE3A-227ENST00000638011 OR2H2O95918 312 aa12.88□□□□□ -0.35
UBE3A-227ENST00000638011 LIFP15018 202 aa12.88□□□□□ -0.35
UBE3A-227ENST00000638011 DUTP33316 252 aaKnown RBP12.88□□□□□ -0.35
UBE3A-227ENST00000638011 ZNF818PQ6ZRF7 136 aa12.88□□□□□ -0.35
UBE3A-227ENST00000638011 SEPSECSQ9HD40 501 aaKnown RBP12.88□□□□□ -0.35
UBE3A-227ENST00000638011 CD5LO43866 347 aa12.88□□□□□ -0.35
UBE3A-227ENST00000638011 SCTP09683 121 aa12.88□□□□□ -0.35
UBE3A-227ENST00000638011 ZIC1Q15915 447 aa12.88□□□□□ -0.35
UBE3A-227ENST00000638011 PTCRAQ6ISU1 281 aaPredicted RBP12.88□□□□□ -0.35
UBE3A-227ENST00000638011 NPIPB11E5RHQ5 1161 aa12.88□□□□□ -0.35
UBE3A-227ENST00000638011 COX14Q96I36 57 aa12.88□□□□□ -0.35
UBE3A-227ENST00000638011 KLF17Q5JT82 389 aaPredicted RBP12.87□□□□□ -0.35
UBE3A-227ENST00000638011 GTF3AQ92664 365 aaKnown RBP12.87□□□□□ -0.35
UBE3A-227ENST00000638011 OTORQ9NRC9 128 aa12.87□□□□□ -0.35
UBE3A-227ENST00000638011 M0R381 172 aa12.87□□□□□ -0.35
UBE3A-227ENST00000638011 F8VVB4 439 aa12.87□□□□□ -0.35
UBE3A-227ENST00000638011 F8VWA3 439 aa12.87□□□□□ -0.35
UBE3A-227ENST00000638011 NTN1O95631 604 aa12.87□□□□□ -0.35
UBE3A-227ENST00000638011 RPL23P62829 140 aaKnown RBP12.87□□□□□ -0.35
UBE3A-227ENST00000638011 FOXI3A8MTJ6 420 aaPredicted RBP12.87□□□□□ -0.35
UBE3A-227ENST00000638011 LEPROTO15243 131 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms