RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 NXPH3O95157 252 aa13.35□□□□□ -0.27
CLN6-218ENST00000637223 HOXB5P09067 269 aa13.35□□□□□ -0.27
CLN6-218ENST00000637223 RRAS2P62070 204 aaPredicted RBP13.35□□□□□ -0.27
CLN6-218ENST00000637223 DEFB136Q30KP8 78 aa13.35□□□□□ -0.27
CLN6-218ENST00000637223 OR4F17Q8NGA8 305 aa13.35□□□□□ -0.27
CLN6-218ENST00000637223 COQ8AQ8NI60 647 aa13.35□□□□□ -0.27
CLN6-218ENST00000637223 DUX3Q96PT4 197 aa13.35□□□□□ -0.27
CLN6-218ENST00000637223 OR4F4Q96R69 305 aa13.35□□□□□ -0.27
CLN6-218ENST00000637223 SEC22CQ9BRL7 303 aa13.35□□□□□ -0.27
CLN6-218ENST00000637223 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.35□□□□□ -0.27
CLN6-218ENST00000637223 TET2Q6N021 2002 aaPredicted RBP13.35□□□□□ -0.27
CLN6-218ENST00000637223 TNCP24821 2201 aa13.34□□□□□ -0.27
CLN6-218ENST00000637223 PIGBOS1A0A0B4J2F0 54 aa13.34□□□□□ -0.27
CLN6-218ENST00000637223 DUXBA0A1W2PPF3 345 aa13.34□□□□□ -0.27
CLN6-218ENST00000637223 OR2J3O76001 311 aa13.34□□□□□ -0.27
CLN6-218ENST00000637223 BRI3O95415 125 aa13.34□□□□□ -0.27
CLN6-218ENST00000637223 DUS4LO95620 317 aaKnown RBP13.34□□□□□ -0.27
CLN6-218ENST00000637223 SULT1A3P0DMM9 295 aa13.34□□□□□ -0.27
CLN6-218ENST00000637223 SULT1A4P0DMN0 295 aa13.34□□□□□ -0.27
CLN6-218ENST00000637223 DEFA4P12838 97 aa13.34□□□□□ -0.27
CLN6-218ENST00000637223 RHOGP84095 191 aa13.34□□□□□ -0.27
CLN6-218ENST00000637223 HSD17B13Q7Z5P4 300 aaPredicted RBP13.34□□□□□ -0.27
CLN6-218ENST00000637223 C4orf3Q8WVX3 66 aa13.34□□□□□ -0.27
CLN6-218ENST00000637223 ASB13Q8WXK3 278 aa13.34□□□□□ -0.27
CLN6-218ENST00000637223 NEURL2Q9BR09 285 aa13.34□□□□□ -0.27
CLN6-218ENST00000637223 PLEKHA3Q9HB20 300 aa13.34□□□□□ -0.27
CLN6-218ENST00000637223 TRRAPQ9Y4A5 3859 aa13.33□□□□□ -0.28
CLN6-218ENST00000637223 C13orf42A0A1B0GVH6 325 aa13.33□□□□□ -0.28
CLN6-218ENST00000637223 ADAP1O75689 374 aa13.33□□□□□ -0.28
CLN6-218ENST00000637223 HOXA1P49639 335 aaPredicted RBP13.33□□□□□ -0.28
CLN6-218ENST00000637223 SMCO1Q147U7 214 aa13.33□□□□□ -0.28
CLN6-218ENST00000637223 GGNBP1Q5YKI7 109 aa13.33□□□□□ -0.28
CLN6-218ENST00000637223 AKAP14Q86UN6 197 aa13.33□□□□□ -0.28
CLN6-218ENST00000637223 ZNF431Q8TF32 576 aaPredicted RBP13.33□□□□□ -0.28
CLN6-218ENST00000637223 FANCD2OSQ96PS1 177 aa13.33□□□□□ -0.28
CLN6-218ENST00000637223 MED28Q9H204 178 aa13.33□□□□□ -0.28
CLN6-218ENST00000637223 TMED3Q9Y3Q3 217 aa13.33□□□□□ -0.28
CLN6-218ENST00000637223 TRBV9A0A0B4J1U6 114 aa13.32□□□□□ -0.28
CLN6-218ENST00000637223 A0A0G2JLM5 398 aa13.32□□□□□ -0.28
CLN6-218ENST00000637223 I3L521 148 aa13.32□□□□□ -0.28
CLN6-218ENST00000637223 PF4P02776 101 aa13.32□□□□□ -0.28
CLN6-218ENST00000637223 LGALS1P09382 135 aaKnown RBP13.32□□□□□ -0.28
CLN6-218ENST00000637223 SPCS3P61009 180 aa13.32□□□□□ -0.28
CLN6-218ENST00000637223 AARDQ4LEZ3 155 aa13.32□□□□□ -0.28
CLN6-218ENST00000637223 ETV3LQ6ZN32 361 aa13.32□□□□□ -0.28
CLN6-218ENST00000637223 MRPL41Q8IXM3 137 aaKnown RBP13.32□□□□□ -0.28
CLN6-218ENST00000637223 OR1S1Q8NH92 325 aa13.32□□□□□ -0.28
CLN6-218ENST00000637223 MITD1Q8WV92 249 aa13.32□□□□□ -0.28
CLN6-218ENST00000637223 RAX2Q96IS3 184 aa13.32□□□□□ -0.28
CLN6-218ENST00000637223 FBXL7Q9UJT9 491 aa13.32□□□□□ -0.28
CLN6-218ENST00000637223 DMRT1Q9Y5R6 373 aa13.32□□□□□ -0.28
CLN6-218ENST00000637223 IGLV11-55A0A075B6I3 123 aa13.31□□□□□ -0.28
CLN6-218ENST00000637223 A0A1B0GU03 582 aa13.31□□□□□ -0.28
CLN6-218ENST00000637223 FAM223BA6NKX1 122 aa13.31□□□□□ -0.28
CLN6-218ENST00000637223 NDUFB8O95169 186 aa13.31□□□□□ -0.28
CLN6-218ENST00000637223 ATP5G2Q06055 141 aa13.31□□□□□ -0.28
CLN6-218ENST00000637223 FAM223AQ8IWN6 122 aa13.31□□□□□ -0.28
CLN6-218ENST00000637223 OR2C3Q8N628 320 aa13.31□□□□□ -0.28
CLN6-218ENST00000637223 NECAP1Q8NC96 275 aa13.31□□□□□ -0.28
CLN6-218ENST00000637223 OR52E5Q8NH55 327 aa13.31□□□□□ -0.28
CLN6-218ENST00000637223 USMG5Q96IX5 58 aa13.31□□□□□ -0.28
CLN6-218ENST00000637223 ENY2Q9NPA8 101 aa13.31□□□□□ -0.28
CLN6-218ENST00000637223 F11RQ9Y624 299 aaKnown RBP13.31□□□□□ -0.28
CLN6-218ENST00000637223 CEBPZOSA8MTT3 80 aa13.3□□□□□ -0.28
CLN6-218ENST00000637223 MPTX1A8MV57 137 aa13.3□□□□□ -0.28
CLN6-218ENST00000637223 CCL24O00175 119 aa13.3□□□□□ -0.28
CLN6-218ENST00000637223 HIST1H1BP16401 226 aaKnown RBP13.3□□□□□ -0.28
CLN6-218ENST00000637223 MFAP2P55001 183 aa13.3□□□□□ -0.28
CLN6-218ENST00000637223 ERHP84090 104 aaKnown RBP13.3□□□□□ -0.28
CLN6-218ENST00000637223 RUNX1Q01196 453 aa13.3□□□□□ -0.28
CLN6-218ENST00000637223 C15orf32Q32M92 178 aa13.3□□□□□ -0.28
CLN6-218ENST00000637223 SLC25A24Q6NUK1 477 aa13.3□□□□□ -0.28
CLN6-218ENST00000637223 UXS1Q8NBZ7 420 aa13.3□□□□□ -0.28
CLN6-218ENST00000637223 OR11H1Q8NG94 326 aa13.3□□□□□ -0.28
CLN6-218ENST00000637223 P2RX4Q99571 388 aa13.3□□□□□ -0.28
CLN6-218ENST00000637223 S4R3C0 116 aa13.3□□□□□ -0.28
CLN6-218ENST00000637223 ANKRD34BA5PLL1 514 aa13.29□□□□□ -0.28
CLN6-218ENST00000637223 SSNA1O43805 119 aa13.29□□□□□ -0.28
CLN6-218ENST00000637223 CCNKO75909 580 aa13.29□□□□□ -0.28
CLN6-218ENST00000637223 IFNA21P01568 189 aa13.29□□□□□ -0.28
CLN6-218ENST00000637223 MYCNOSP40205 109 aa13.29□□□□□ -0.28
CLN6-218ENST00000637223 EXOSC2Q13868 293 aaKnown RBP13.29□□□□□ -0.28
CLN6-218ENST00000637223 KLK9Q2XQG4 91 aa13.29□□□□□ -0.28
CLN6-218ENST00000637223 C11orf87Q6NUJ2 197 aa13.29□□□□□ -0.28
CLN6-218ENST00000637223 OR1N2Q8NGR9 330 aa13.29□□□□□ -0.28
CLN6-218ENST00000637223 KLK9Q9UKQ9 250 aa13.29□□□□□ -0.28
CLN6-218ENST00000637223 IGHV4OR15-8A0A075B7B6 117 aa13.28□□□□□ -0.28
CLN6-218ENST00000637223 A0A087WW49 117 aa13.28□□□□□ -0.28
CLN6-218ENST00000637223 CYB5BO43169 146 aa13.28□□□□□ -0.28
CLN6-218ENST00000637223 PITX3O75364 302 aa13.28□□□□□ -0.28
CLN6-218ENST00000637223 IGHV3-23P01764 117 aa13.28□□□□□ -0.28
CLN6-218ENST00000637223 SLC25A6P12236 298 aa13.28□□□□□ -0.28
CLN6-218ENST00000637223 TNFRSF9Q07011 255 aa13.28□□□□□ -0.28
CLN6-218ENST00000637223 ZNF343Q6P1L6 599 aa13.28□□□□□ -0.28
CLN6-218ENST00000637223 C12orf45Q8N5I9 185 aaPredicted RBP13.28□□□□□ -0.28
CLN6-218ENST00000637223 OR1P1Q8NH06 330 aa13.28□□□□□ -0.28
CLN6-218ENST00000637223 DPF1Q92782 380 aa13.28□□□□□ -0.28
CLN6-218ENST00000637223 RBKSQ9H477 322 aa13.28□□□□□ -0.28
CLN6-218ENST00000637223 HEYLQ9NQ87 328 aaPredicted RBP13.28□□□□□ -0.28
CLN6-218ENST00000637223 HSPB7Q9UBY9 170 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms