RNA–Protein interactions for RNA: ENST00000637175.1

ATRX-223, Transcript of ATRX, chromatin remodeler, human

TSL 5

Gene ATRX, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-223	ENST00000637175	HMCN1	Q96RW7	5635 aa		0.75	□□□□□ -2.29
ATRX-223	ENST00000637175	IGKV1D-43	A0A0B4J1Z2	117 aa		0.75	□□□□□ -2.29
ATRX-223	ENST00000637175	IGKV1-5	P01602	117 aa		0.75	□□□□□ -2.29
ATRX-223	ENST00000637175	PMP2	P02689	132 aa		0.75	□□□□□ -2.29
ATRX-223	ENST00000637175	RNASE3	P12724	160 aa	Known RBP	0.75	□□□□□ -2.29
ATRX-223	ENST00000637175	RPS4Y1	P22090	263 aa	Known RBP	0.75	□□□□□ -2.29
ATRX-223	ENST00000637175	C10orf55	Q5SWW7	151 aa		0.75	□□□□□ -2.29
ATRX-223	ENST00000637175	LRRC25	Q8N386	305 aa	Predicted RBP	0.75	□□□□□ -2.29
ATRX-223	ENST00000637175	OR51D1	Q8NGF3	324 aa		0.75	□□□□□ -2.29
ATRX-223	ENST00000637175	MRPL30	Q8TCC3	161 aa	Known RBP	0.75	□□□□□ -2.29
ATRX-223	ENST00000637175	MRPS26	Q9BYN8	205 aa	Known RBP	0.75	□□□□□ -2.29
ATRX-223	ENST00000637175	YIPF3	Q9GZM5	350 aa		0.75	□□□□□ -2.29
ATRX-223	ENST00000637175	GUCA1B	Q9UMX6	200 aa		0.75	□□□□□ -2.29
ATRX-223	ENST00000637175	NOSIP	Q9Y314	301 aa	Known RBP	0.75	□□□□□ -2.29
ATRX-223	ENST00000637175	HEATR5B	Q9P2D3	2071 aa		0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	SNAPC4	Q5SXM2	1469 aa		0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	DLG5	Q8TDM6	1919 aa		0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	TGIF2-C20orf24	A0A0A6YYL0	155 aa		0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	KCNK1	O00180	336 aa		0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	HIST1H1T	P22492	207 aa	Predicted RBP	0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	CTAG1A	P78358	180 aa		0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	IFITM2	Q01629	132 aa		0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	STX5	Q13190	355 aa		0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	ZNF846	Q147U1	533 aa		0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	AADACL3	Q5VUY0	350 aa		0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	OR13C4	Q8NGS5	318 aa		0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	PFN4	Q8NHR9	129 aa		0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	TMEM106A	Q96A25	262 aa		0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	CMTM6	Q9NX76	183 aa		0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	TP73-AS1	Q9UF72	201 aa		0.74	□□□□□ -2.29
ATRX-223	ENST00000637175	COL4A5	P29400	1685 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	HCRT	O43612	131 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	NIPSNAP2	O75323	286 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	IL9	P15248	144 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	HIST1H2BO	P23527	126 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	HIST1H2BB	P33778	126 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	HIST1H2BD	P58876	126 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	HIST1H2BC	P62807	126 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	RUNX1	Q01196	453 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	HIST2H2BE	Q16778	126 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	IMPG1	Q17R60	797 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	HIST2H3PS2	Q5TEC6	136 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	C8orf74	Q6P047	294 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	RPL22L1	Q6P5R6	122 aa	Known RBP	0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	LCN15	Q6UWW0	184 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	ZNF826P	Q6ZT77	177 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	HIST1H2BH	Q93079	126 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	IMP4	Q96G21	291 aa	Known RBP	0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	OR52E6	Q96RD3	313 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	HIST1H2BN	Q99877	126 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	HIST1H2BM	Q99879	126 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	NIPSNAP1	Q9BPW8	284 aa		0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	PARD6G	Q9BYG4	376 aa	Predicted RBP	0.73	□□□□□ -2.29
ATRX-223	ENST00000637175	TTC21A	Q8NDW8	1320 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	INTS1	Q8N201	2190 aa	Known RBP	0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	TMEM212	A6NML5	194 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175		M0R036	132 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	AHSA1	O95433	338 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	HLA-DRB1	P01911	266 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	UBB	P0CG47	229 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	EIF2B2	P49770	351 aa	Known RBP	0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	SPCS3	P61009	180 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	PSME3	P61289	254 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	SNRPD2	P62316	118 aa	Known RBP	0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	HBA1	P69905	142 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	PLCXD2	Q0VAA5	305 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	SURF2	Q15527	256 aa	Predicted RBP	0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	ACOT6	Q3I5F7	207 aa	Predicted RBP	0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	CCDC122	Q5T0U0	273 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175		Q6ZQT0	140 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	DEFB128	Q7Z7B8	93 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	IQCF2	Q8IXL9	164 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	C20orf196	Q8IYI0	205 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	ZNF565	Q8N9K5	539 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	ARL5B	Q96KC2	179 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	PPP1R2P1	Q96PQ5	205 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	REG4	Q9BYZ8	158 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	PRTFDC1	Q9NRG1	225 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	FBXL12	Q9NXK8	326 aa		0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	WRN	Q14191	1432 aa	Predicted RBP eCLIP	0.72	□□□□□ -2.29
ATRX-223	ENST00000637175	ADCY9	O60503	1353 aa		0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	NUP155	O75694	1391 aa		0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	CCDC88A	Q3V6T2	1871 aa		0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	MTUS2	Q5JR59	1369 aa		0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	TNNC2	P02585	160 aa		0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	SHBG	P04278	402 aa		0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	IFNA16	P05015	189 aa		0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	CTSD	P07339	412 aa	Predicted RBP	0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	HTR1A	P08908	422 aa		0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	SULT1A1	P50225	295 aa		0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	UBE2I	P63279	158 aa	Known RBP	0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	SPANXN3	Q5MJ09	141 aa		0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	PTRHD1	Q6GMV3	140 aa	Known RBP	0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	AAED1	Q7RTV5	226 aa		0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	C12orf29	Q8N999	325 aa		0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	TERB2	Q8NHR7	220 aa		0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	MCFD2	Q8NI22	146 aa		0.71	□□□□□ -2.3
ATRX-223	ENST00000637175	MRPL27	Q9P0M9	148 aa	Known RBP	0.71	□□□□□ -2.3

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms