RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 OR5C1Q8NGR4 320 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 FAM110AQ9BQ89 295 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 SS18L2Q9UHA2 77 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 PPIAL4AQ9Y536 164 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 PKD1L2Q7Z442 2459 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 TNFRSF1AP19438 455 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 ZNF66Q6ZN08 573 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 ZNF645Q8N7E2 425 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 PIMREGQ9BSJ6 248 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 DYNLRB1Q9NP97 96 aa9.49□□□□□ -0.89
CLN6-217ENST00000636964 RALYQ9UKM9 306 aaKnown RBP9.49□□□□□ -0.89
CLN6-217ENST00000636964 TMPRSS2O15393 492 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 CD3EP07766 207 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 ZNF816Q0VGE8 651 aaPredicted RBP9.48□□□□□ -0.89
CLN6-217ENST00000636964 VAMP3Q15836 100 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 STUMQ69YW2 141 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 C16orf82Q7Z2V1 217 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 TMEM252Q8N6L7 170 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 TMEM217Q8N7C4 229 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 OR4S2Q8NH73 311 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 RNASE6Q93091 150 aaKnown RBP9.48□□□□□ -0.89
CLN6-217ENST00000636964 DAZAP1Q96EP5 407 aaKnown RBP9.48□□□□□ -0.89
CLN6-217ENST00000636964 PRORYQ9H606 182 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 PLEKHF2Q9H8W4 249 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 LAMP3Q9UQV4 416 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 ZFP92A6NM28 416 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 SCGB1D1O95968 90 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 TMEM37Q8WXS4 190 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 RBMXL1Q96E39 390 aaKnown RBP9.48□□□□□ -0.89
CLN6-217ENST00000636964 GAFA1Q96PS6 74 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 ARFGEF3Q5TH69 2177 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 IGHV2-70DA0A0C4DH43 119 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 CORTO00230 105 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 HPRT1P00492 218 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 OR51G1Q8NGK1 321 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 TMEM170AQ8WVE7 144 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 SPIN2AQ99865 258 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 SPIN2BQ9BPZ2 258 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 FAM234AQ9H0X4 552 aa9.48□□□□□ -0.89
CLN6-217ENST00000636964 CISD1Q9NZ45 108 aaKnown RBP9.48□□□□□ -0.89
CLN6-217ENST00000636964 HELTA6NFD8 242 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 IGKV1-5P01602 117 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 GBGT1Q8N5D6 347 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 TPPP3Q9BW30 176 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 CACNG5Q9UF02 275 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 FUT9Q9Y231 359 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 ABCA1O95477 2261 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 HIVEP3Q5T1R4 2406 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 C17orf98A8MV24 154 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 CHST1O43916 411 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 OR7C2O60412 319 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 CLDN14O95500 239 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 KRASP01116 189 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 OR10J4P0C629 311 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 ZNF134P52741 427 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 ZNF266Q14584 549 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 PET117Q6UWS5 81 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 TMEM256Q8N2U0 113 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 Q8TCH9 128 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 SDSLQ96GA7 329 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 AGMATQ9BSE5 352 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 RAB1BQ9H0U4 201 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 LIN7CQ9NUP9 197 aaKnown RBP9.47□□□□□ -0.89
CLN6-217ENST00000636964 CALYQ9NYX4 217 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 RNF115Q9Y4L5 304 aa9.47□□□□□ -0.89
CLN6-217ENST00000636964 H3BP45 60 aa9.46□□□□□ -0.89
CLN6-217ENST00000636964 YPEL1O60688 119 aa9.46□□□□□ -0.89
CLN6-217ENST00000636964 NDUFB8O95169 186 aa9.46□□□□□ -0.89
CLN6-217ENST00000636964 MORN2Q502X0 79 aa9.46□□□□□ -0.89
CLN6-217ENST00000636964 ACTL10Q5JWF8 245 aa9.46□□□□□ -0.89
CLN6-217ENST00000636964 ZNF295-AS1Q8N0V1 137 aa9.46□□□□□ -0.89
CLN6-217ENST00000636964 ANAPC16Q96DE5 110 aa9.46□□□□□ -0.89
CLN6-217ENST00000636964 YPEL2Q96QA6 119 aa9.46□□□□□ -0.89
CLN6-217ENST00000636964 LYRM2Q9NU23 88 aaPredicted RBP9.46□□□□□ -0.89
CLN6-217ENST00000636964 LRRC30A6NM36 301 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 LINC00473A8K010 186 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 CLDN1O95832 211 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 BCL2P10415 239 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 G6PCP35575 357 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 BRWD1-AS2P59051 145 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 PNRC1Q12796 327 aaPredicted RBP9.46□□□□□ -0.9
CLN6-217ENST00000636964 ZNF788Q6ZQV5 615 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 IL22RA2Q969J5 263 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 FKBP11Q9NYL4 201 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 ACACBO00763 2458 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 LYNX1G3V0Z9 82 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 ADH4P08319 380 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 LYNX1P0DP58 116 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 LOXL3P58215 753 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 ID3Q02535 119 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 C17orf58Q2M2W7 97 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 Q6ZVH6 145 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 SSX8Q7RTT4 187 aa9.46□□□□□ -0.9
CLN6-217ENST00000636964 CIB3Q96Q77 187 aaPredicted RBP9.46□□□□□ -0.9
CLN6-217ENST00000636964 DUXBA0A1W2PPF3 345 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 PROP1O75360 226 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 TOMM40O96008 361 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 IFNA5P01569 189 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 PAX9P55771 341 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 SMAGPQ0VAQ4 97 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms