RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 TMEM187Q14656 261 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 TMEM128Q5BJH2 165 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 TMEM268Q5VZI3 342 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 ZNF343Q6P1L6 599 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 TMED4Q7Z7H5 227 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 CENPSQ8N2Z9 138 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 MUC7Q8TAX7 377 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 DPF1Q92782 380 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 MCRIP2Q9BUT9 160 aaKnown RBP12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 ALX4Q9H161 411 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 GAR1Q9NY12 217 aaKnown RBP12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 IGLV11-55A0A075B6I3 123 aa12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 IGHV4OR15-8A0A075B7B6 117 aa12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 A0A087WW49 117 aa12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 A0A0G2JRQ6 117 aa12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 CYB5BO43169 146 aa12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 RBMXL2O75526 392 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 HSPB1P04792 205 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 REG1AP05451 166 aa12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 CCR6P51684 374 aa12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 RAB25P57735 213 aa12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 UBE2MP61081 183 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 WT1-ASQ06250 92 aa12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 C19orf35Q6ZS72 473 aa12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 SELENOHQ8IZQ5 122 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 OR10W1Q8NGF6 305 aa12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 FANCD2OSQ96PS1 177 aa12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 HINT2Q9BX68 163 aa12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 STAB2Q8WWQ8 2551 aa12.47□□□□□ -0.41
CACNA1A-229ENST00000636670 DUXBA0A1W2PPF3 345 aa12.46□□□□□ -0.41
CACNA1A-229ENST00000636670 OR2J3O76001 311 aa12.46□□□□□ -0.41
CACNA1A-229ENST00000636670 OR13C7P0DN81 318 aa12.46□□□□□ -0.41
CACNA1A-229ENST00000636670 DEFA4P12838 97 aa12.46□□□□□ -0.41
CACNA1A-229ENST00000636670 MECP2P51608 486 aaKnown RBP12.46□□□□□ -0.41
CACNA1A-229ENST00000636670 HSPE1P61604 102 aaKnown RBP12.46□□□□□ -0.41
CACNA1A-229ENST00000636670 EGFEM1PQ0D2K5 195 aa12.46□□□□□ -0.41
CACNA1A-229ENST00000636670 C15orf32Q32M92 178 aa12.46□□□□□ -0.41
CACNA1A-229ENST00000636670 AARDQ4LEZ3 155 aa12.46□□□□□ -0.41
CACNA1A-229ENST00000636670 SLC35G3Q8N808 338 aa12.46□□□□□ -0.41
CACNA1A-229ENST00000636670 PDCD10Q9BUL8 212 aa12.46□□□□□ -0.41
CACNA1A-229ENST00000636670 RANGRFQ9HD47 186 aaPredicted RBP12.46□□□□□ -0.41
CACNA1A-229ENST00000636670 A0A0B4J2A0 478 aa12.45□□□□□ -0.42
CACNA1A-229ENST00000636670 LINC00854A0A1B0GVQ3 168 aa12.45□□□□□ -0.42
CACNA1A-229ENST00000636670 LYRM1O43325 122 aa12.45□□□□□ -0.42
CACNA1A-229ENST00000636670 ZP3P21754 424 aa12.45□□□□□ -0.42
CACNA1A-229ENST00000636670 ATP5G2Q06055 141 aa12.45□□□□□ -0.42
CACNA1A-229ENST00000636670 ZNF846Q147U1 533 aa12.45□□□□□ -0.42
CACNA1A-229ENST00000636670 IZUMO4Q1ZYL8 232 aa12.45□□□□□ -0.42
CACNA1A-229ENST00000636670 LGI3Q8N145 548 aa12.45□□□□□ -0.42
CACNA1A-229ENST00000636670 ZNF114Q8NC26 417 aa12.45□□□□□ -0.42
CACNA1A-229ENST00000636670 OR1L6Q8NGR2 347 aa12.45□□□□□ -0.42
CACNA1A-229ENST00000636670 PLEKHA3Q9HB20 300 aa12.45□□□□□ -0.42
CACNA1A-229ENST00000636670 THYN1Q9P016 225 aa12.45□□□□□ -0.42
CACNA1A-229ENST00000636670 SHPKQ9UHJ6 478 aa12.45□□□□□ -0.42
CACNA1A-229ENST00000636670 FBXL7Q9UJT9 491 aa12.45□□□□□ -0.42
CACNA1A-229ENST00000636670 F11RQ9Y624 299 aaKnown RBP12.45□□□□□ -0.42
CACNA1A-229ENST00000636670 LYSTQ99698 3801 aa12.44□□□□□ -0.42
CACNA1A-229ENST00000636670 A0A0B4J293 547 aa12.44□□□□□ -0.42
CACNA1A-229ENST00000636670 INS-IGF2F8WCM5 200 aa12.44□□□□□ -0.42
CACNA1A-229ENST00000636670 ST8SIA3O43173 380 aa12.44□□□□□ -0.42
CACNA1A-229ENST00000636670 VAMP1P23763 118 aa12.44□□□□□ -0.42
CACNA1A-229ENST00000636670 SLURP1P55000 103 aa12.44□□□□□ -0.42
CACNA1A-229ENST00000636670 CXorf58Q96LI9 332 aa12.44□□□□□ -0.42
CACNA1A-229ENST00000636670 PEF1Q9UBV8 284 aaKnown RBP12.44□□□□□ -0.42
CACNA1A-229ENST00000636670 CACNG5Q9UF02 275 aa12.44□□□□□ -0.42
CACNA1A-229ENST00000636670 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-229ENST00000636670 ANKRD34BA5PLL1 514 aa12.43□□□□□ -0.42
CACNA1A-229ENST00000636670 OVOL1O14753 267 aa12.43□□□□□ -0.42
CACNA1A-229ENST00000636670 PLA2G10O15496 165 aa12.43□□□□□ -0.42
CACNA1A-229ENST00000636670 SFT2D2O95562 160 aa12.43□□□□□ -0.42
CACNA1A-229ENST00000636670 HOXD3P31249 432 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-229ENST00000636670 PPP1R1AQ13522 171 aa12.43□□□□□ -0.42
CACNA1A-229ENST00000636670 NMSQ5H8A3 153 aa12.43□□□□□ -0.42
CACNA1A-229ENST00000636670 OR2C3Q8N628 320 aa12.43□□□□□ -0.42
CACNA1A-229ENST00000636670 LRTM2Q8N967 370 aa12.43□□□□□ -0.42
CACNA1A-229ENST00000636670 EEF1AKMT3Q96AZ1 226 aa12.43□□□□□ -0.42
CACNA1A-229ENST00000636670 PRR13Q9NZ81 148 aa12.43□□□□□ -0.42
CACNA1A-229ENST00000636670 CACFD1Q9UGQ2 172 aa12.43□□□□□ -0.42
CACNA1A-229ENST00000636670 DMRT1Q9Y5R6 373 aa12.43□□□□□ -0.42
CACNA1A-229ENST00000636670 NDUFB8O95169 186 aa12.42□□□□□ -0.42
CACNA1A-229ENST00000636670 IFNA17P01571 189 aa12.42□□□□□ -0.42
CACNA1A-229ENST00000636670 SULT1A3P0DMM9 295 aa12.42□□□□□ -0.42
CACNA1A-229ENST00000636670 SULT1A4P0DMN0 295 aa12.42□□□□□ -0.42
CACNA1A-229ENST00000636670 HOXA1P49639 335 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-229ENST00000636670 C9orf66Q5T8R8 295 aa12.42□□□□□ -0.42
CACNA1A-229ENST00000636670 OR1P1Q8NH06 330 aa12.42□□□□□ -0.42
CACNA1A-229ENST00000636670 OR52E5Q8NH55 327 aa12.42□□□□□ -0.42
CACNA1A-229ENST00000636670 DCUN1D4Q92564 292 aa12.42□□□□□ -0.42
CACNA1A-229ENST00000636670 GPR146Q96CH1 333 aa12.42□□□□□ -0.42
CACNA1A-229ENST00000636670 CCDC140Q96MF4 163 aa12.42□□□□□ -0.42
CACNA1A-229ENST00000636670 C20orf85Q9H1P6 137 aa12.42□□□□□ -0.42
CACNA1A-229ENST00000636670 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-229ENST00000636670 TRBV7-1A0A0A6YYK4 115 aa12.41□□□□□ -0.42
CACNA1A-229ENST00000636670 UPK1BO75841 260 aa12.41□□□□□ -0.42
CACNA1A-229ENST00000636670 TRBV12-3P01733 135 aa12.41□□□□□ -0.42
CACNA1A-229ENST00000636670 HLA-AP01891 365 aaKnown RBP12.41□□□□□ -0.42
CACNA1A-229ENST00000636670 SPCS3P61009 180 aa12.41□□□□□ -0.42
CACNA1A-229ENST00000636670 ERHP84090 104 aaKnown RBP12.41□□□□□ -0.42
CACNA1A-229ENST00000636670 Q6ZRM9 215 aa12.41□□□□□ -0.42
CACNA1A-229ENST00000636670 VN1R17PQ8TDU5 208 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms