RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 SMIM4Q8WVI0 70 aa13.91□□□□□ -0.18
CLN6-214ENST00000636314 DIRAS2Q96HU8 199 aa13.91□□□□□ -0.18
CLN6-214ENST00000636314 CITED4Q96RK1 184 aa13.91□□□□□ -0.18
CLN6-214ENST00000636314 C6orf62Q9GZU0 229 aaPredicted RBP13.91□□□□□ -0.18
CLN6-214ENST00000636314 COPZ2Q9P299 210 aa13.91□□□□□ -0.18
CLN6-214ENST00000636314 A8MWP6 167 aa13.9□□□□□ -0.18
CLN6-214ENST00000636314 EDN2P20800 178 aa13.9□□□□□ -0.18
CLN6-214ENST00000636314 MEF2DQ14814 521 aa13.9□□□□□ -0.18
CLN6-214ENST00000636314 PLET1Q6UQ28 207 aa13.9□□□□□ -0.18
CLN6-214ENST00000636314 CCDC71LQ8N9Z2 235 aa13.9□□□□□ -0.18
CLN6-214ENST00000636314 TERB2Q8NHR7 220 aa13.9□□□□□ -0.18
CLN6-214ENST00000636314 ZFAND1Q8TCF1 268 aa13.9□□□□□ -0.18
CLN6-214ENST00000636314 THAP7Q9BT49 309 aaPredicted RBP13.9□□□□□ -0.18
CLN6-214ENST00000636314 RABL2AQ9UBK7 228 aaPredicted RBP13.9□□□□□ -0.18
CLN6-214ENST00000636314 RABL2BQ9UNT1 228 aa13.9□□□□□ -0.18
CLN6-214ENST00000636314 TMEM213A2RRL7 107 aa13.89□□□□□ -0.19
CLN6-214ENST00000636314 A8MZ25 164 aa13.89□□□□□ -0.19
CLN6-214ENST00000636314 H3BMQ9 156 aa13.89□□□□□ -0.19
CLN6-214ENST00000636314 AKR1C2P52895 323 aa13.89□□□□□ -0.19
CLN6-214ENST00000636314 MFAP2P55001 183 aa13.89□□□□□ -0.19
CLN6-214ENST00000636314 DEFB114Q30KQ6 69 aa13.89□□□□□ -0.19
CLN6-214ENST00000636314 FAAP20Q6NZ36 180 aa13.89□□□□□ -0.19
CLN6-214ENST00000636314 OR1L6Q8NGR2 347 aa13.89□□□□□ -0.19
CLN6-214ENST00000636314 OR13C8Q8NGS7 320 aa13.89□□□□□ -0.19
CLN6-214ENST00000636314 CACNG8Q8WXS5 425 aa13.89□□□□□ -0.19
CLN6-214ENST00000636314 ISOC1Q96CN7 298 aa13.89□□□□□ -0.19
CLN6-214ENST00000636314 TP53RKQ96S44 253 aa13.89□□□□□ -0.19
CLN6-214ENST00000636314 C19orf73Q9NVV2 129 aa13.89□□□□□ -0.19
CLN6-214ENST00000636314 TECRQ9NZ01 308 aaKnown RBP13.89□□□□□ -0.19
CLN6-214ENST00000636314 C3orf85A0A1B0GTC6 90 aa13.88□□□□□ -0.19
CLN6-214ENST00000636314 CTDSPLO15194 276 aa13.88□□□□□ -0.19
CLN6-214ENST00000636314 TGOLN2O43493 480 aa13.88□□□□□ -0.19
CLN6-214ENST00000636314 ATG12O94817 140 aa13.88□□□□□ -0.19
CLN6-214ENST00000636314 CBLN1P23435 193 aa13.88□□□□□ -0.19
CLN6-214ENST00000636314 CD81P60033 236 aa13.88□□□□□ -0.19
CLN6-214ENST00000636314 TRIM16LQ309B1 348 aa13.88□□□□□ -0.19
CLN6-214ENST00000636314 MARCH1Q8TCQ1 289 aa13.88□□□□□ -0.19
CLN6-214ENST00000636314 C21orf62Q9NYP8 219 aa13.88□□□□□ -0.19
CLN6-214ENST00000636314 IGHV3-21A0A0B4J1V1 117 aa13.87□□□□□ -0.19
CLN6-214ENST00000636314 IGHV3-35A0A0C4DH35 117 aa13.87□□□□□ -0.19
CLN6-214ENST00000636314 OR2T8A6NH00 312 aa13.87□□□□□ -0.19
CLN6-214ENST00000636314 DISC1C4P0D8 188 aa13.87□□□□□ -0.19
CLN6-214ENST00000636314 CTSDP07339 412 aaPredicted RBP13.87□□□□□ -0.19
CLN6-214ENST00000636314 PRCDQ00LT1 54 aa13.87□□□□□ -0.19
CLN6-214ENST00000636314 GUCA2BQ16661 112 aa13.87□□□□□ -0.19
CLN6-214ENST00000636314 UNQ9165/PRO28630Q6UXU0 137 aa13.87□□□□□ -0.19
CLN6-214ENST00000636314 OR1P1Q8NH06 330 aa13.87□□□□□ -0.19
CLN6-214ENST00000636314 BSCL2Q96G97 398 aaPredicted RBP13.87□□□□□ -0.19
CLN6-214ENST00000636314 SLIRPQ9GZT3 109 aaKnown RBP13.87□□□□□ -0.19
CLN6-214ENST00000636314 TUBA4BQ9H853 241 aa13.87□□□□□ -0.19
CLN6-214ENST00000636314 PLEKHA3Q9HB20 300 aa13.87□□□□□ -0.19
CLN6-214ENST00000636314 SLC2A8Q9NY64 477 aa13.87□□□□□ -0.19
CLN6-214ENST00000636314 C14orf166Q9Y224 244 aaKnown RBP13.87□□□□□ -0.19
CLN6-214ENST00000636314 IGKV1-5P01602 117 aa13.86□□□□□ -0.19
CLN6-214ENST00000636314 AKAIN1P0CW23 69 aa13.86□□□□□ -0.19
CLN6-214ENST00000636314 HSPE1P61604 102 aaKnown RBP13.86□□□□□ -0.19
CLN6-214ENST00000636314 IZUMO4Q1ZYL8 232 aa13.86□□□□□ -0.19
CLN6-214ENST00000636314 OR2C3Q8N628 320 aa13.86□□□□□ -0.19
CLN6-214ENST00000636314 UBAC2Q8NBM4 344 aa13.86□□□□□ -0.19
CLN6-214ENST00000636314 UXS1Q8NBZ7 420 aa13.86□□□□□ -0.19
CLN6-214ENST00000636314 SCARB1Q8WTV0 552 aa13.86□□□□□ -0.19
CLN6-214ENST00000636314 WDR89Q96FK6 387 aaPredicted RBP13.86□□□□□ -0.19
CLN6-214ENST00000636314 NEURL2Q9BR09 285 aa13.86□□□□□ -0.19
CLN6-214ENST00000636314 TM2D3Q9BRN9 247 aa13.86□□□□□ -0.19
CLN6-214ENST00000636314 UFC1Q9Y3C8 167 aa13.86□□□□□ -0.19
CLN6-214ENST00000636314 K7EIM0 57 aa13.85□□□□□ -0.19
CLN6-214ENST00000636314 B3GALNT1O75752 331 aa13.85□□□□□ -0.19
CLN6-214ENST00000636314 SP6Q3SY56 376 aa13.85□□□□□ -0.19
CLN6-214ENST00000636314 TM4SF20Q53R12 229 aa13.85□□□□□ -0.19
CLN6-214ENST00000636314 Q56UQ5 140 aa13.85□□□□□ -0.19
CLN6-214ENST00000636314 ZNF57Q68EA5 555 aaPredicted RBP13.85□□□□□ -0.19
CLN6-214ENST00000636314 SPSB3Q6PJ21 355 aa13.85□□□□□ -0.19
CLN6-214ENST00000636314 OR4C16Q8NGL9 310 aa13.85□□□□□ -0.19
CLN6-214ENST00000636314 MCFD2Q8NI22 146 aa13.85□□□□□ -0.19
CLN6-214ENST00000636314 RNASE11Q8TAA1 199 aaKnown RBP13.85□□□□□ -0.19
CLN6-214ENST00000636314 TMEM190Q8WZ59 177 aa13.85□□□□□ -0.19
CLN6-214ENST00000636314 MARC2Q969Z3 335 aa13.85□□□□□ -0.19
CLN6-214ENST00000636314 MISP3Q96FF7 219 aa13.85□□□□□ -0.19
CLN6-214ENST00000636314 ATP6V0BQ99437 205 aa13.85□□□□□ -0.19
CLN6-214ENST00000636314 ZNF436Q9C0F3 470 aaPredicted RBP13.85□□□□□ -0.19
CLN6-214ENST00000636314 MLXQ9UH92 298 aa13.85□□□□□ -0.19
CLN6-214ENST00000636314 RSL24D1Q9UHA3 163 aaKnown RBP13.85□□□□□ -0.19
CLN6-214ENST00000636314 SELENOKQ9Y6D0 94 aa13.85□□□□□ -0.19
CLN6-214ENST00000636314 ZNF785A8K8V0 405 aa13.84□□□□□ -0.19
CLN6-214ENST00000636314 UCP1P25874 307 aa13.84□□□□□ -0.19
CLN6-214ENST00000636314 ELLP55199 621 aaPredicted RBP13.84□□□□□ -0.19
CLN6-214ENST00000636314 ERHP84090 104 aaKnown RBP13.84□□□□□ -0.19
CLN6-214ENST00000636314 SURF2Q15527 256 aaPredicted RBP13.84□□□□□ -0.19
CLN6-214ENST00000636314 SPINK9Q5DT21 86 aa13.84□□□□□ -0.19
CLN6-214ENST00000636314 BTNL8Q6UX41 500 aa13.84□□□□□ -0.19
CLN6-214ENST00000636314 TMEM61Q8N0U2 210 aa13.84□□□□□ -0.19
CLN6-214ENST00000636314 SLC35G3Q8N808 338 aa13.84□□□□□ -0.19
CLN6-214ENST00000636314 ZNF114Q8NC26 417 aa13.84□□□□□ -0.19
CLN6-214ENST00000636314 RRNAD1Q96FB5 475 aaKnown RBP13.84□□□□□ -0.19
CLN6-214ENST00000636314 PDCD10Q9BUL8 212 aa13.84□□□□□ -0.19
CLN6-214ENST00000636314 CCDC160A6NGH7 325 aa13.83□□□□□ -0.2
CLN6-214ENST00000636314 GSTZ1O43708 216 aaPredicted RBP13.83□□□□□ -0.2
CLN6-214ENST00000636314 CD7P09564 240 aa13.83□□□□□ -0.2
CLN6-214ENST00000636314 P0C879 139 aa13.83□□□□□ -0.2
CLN6-214ENST00000636314 PRRT1Q99946 306 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms