RNA–Protein interactions for RNA: ENST00000635832.1

GABRB3-217, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-217ENST00000635832 TRPM6Q9BX84 2022 aa8.15□□□□□ -1.1
GABRB3-217ENST00000635832 IGKV1D-42A0A075B6H8 117 aa8.15□□□□□ -1.1
GABRB3-217ENST00000635832 TRAV40A0A0B4J280 105 aa8.15□□□□□ -1.1
GABRB3-217ENST00000635832 GRIFINA4D1Z8 144 aa8.15□□□□□ -1.1
GABRB3-217ENST00000635832 B4DSR2 109 aa8.15□□□□□ -1.1
GABRB3-217ENST00000635832 PAX8Q06710 450 aa8.15□□□□□ -1.1
GABRB3-217ENST00000635832 FUT5Q11128 374 aa8.15□□□□□ -1.1
GABRB3-217ENST00000635832 GPHA2Q96T91 129 aa8.15□□□□□ -1.1
GABRB3-217ENST00000635832 KNL1Q8NG31 2342 aa8.15□□□□□ -1.1
GABRB3-217ENST00000635832 LRP5O75197 1615 aa8.15□□□□□ -1.1
GABRB3-217ENST00000635832 CFHR1Q03591 330 aa8.15□□□□□ -1.1
GABRB3-217ENST00000635832 PSG7Q13046 419 aa8.15□□□□□ -1.1
GABRB3-217ENST00000635832 MUC21Q5SSG8 566 aa8.15□□□□□ -1.1
GABRB3-217ENST00000635832 FAM201AQ5SY85 155 aa8.15□□□□□ -1.1
GABRB3-217ENST00000635832 RGPD4Q7Z3J3 1758 aa8.15□□□□□ -1.11
GABRB3-217ENST00000635832 UPK2O00526 184 aa8.15□□□□□ -1.11
GABRB3-217ENST00000635832 GCM2O75603 506 aaPredicted RBP8.15□□□□□ -1.11
GABRB3-217ENST00000635832 CD28P10747 220 aa8.15□□□□□ -1.11
GABRB3-217ENST00000635832 CXCL2P19875 107 aa8.15□□□□□ -1.11
GABRB3-217ENST00000635832 SRSF1Q07955 248 aaKnown RBP eCLIP8.15□□□□□ -1.11
GABRB3-217ENST00000635832 RNF125Q96EQ8 232 aa8.15□□□□□ -1.11
GABRB3-217ENST00000635832 TM2D1Q9BX74 207 aa8.15□□□□□ -1.11
GABRB3-217ENST00000635832 JPT2Q9H910 190 aa8.15□□□□□ -1.11
GABRB3-217ENST00000635832 NUP205Q92621 2012 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 YPEL1O60688 119 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 CGAP01215 116 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 PLNP26678 52 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 CEACAM8P31997 349 aaPredicted RBP8.14□□□□□ -1.11
GABRB3-217ENST00000635832 LY6DQ14210 128 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 ORMDL2Q53FV1 153 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 SLC25A38Q96DW6 304 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 YPEL2Q96QA6 119 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 RBM38Q9H0Z9 239 aaKnown RBP8.14□□□□□ -1.11
GABRB3-217ENST00000635832 SCN9AQ15858 1988 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 ITGB4P16144 1822 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 NHSL1Q5SYE7 1610 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 TRAV41A0A0B4J266 112 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 GGTLC3B5MD39 225 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 IL18BPO95998 194 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 FOXA3P55318 350 aaPredicted RBP8.14□□□□□ -1.11
GABRB3-217ENST00000635832 ZNF585BQ52M93 769 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 TBL2Q9Y4P3 447 aaKnown RBP8.14□□□□□ -1.11
GABRB3-217ENST00000635832 LTBP4Q8N2S1 1624 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 NAPSAO96009 420 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 PAX2Q02962 417 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 ELF5Q9UKW6 265 aaPredicted RBP8.14□□□□□ -1.11
GABRB3-217ENST00000635832 DPRXA6NFQ7 191 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 OR5A1Q8NGJ0 315 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 KNTC1P50748 2209 aa8.14□□□□□ -1.11
GABRB3-217ENST00000635832 IGKV3D-20A0A0C4DH25 116 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 A0A1B0GWB2 263 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 C17orf98A8MV24 154 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 OOSP1A8MZH6 123 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 PPBPP02775 128 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 TMEM95Q3KNT9 176 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 TMEM144Q7Z5S9 345 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 GLMPQ8WWB7 406 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 MBD3L1Q8WWY6 194 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 SEPSECSQ9HD40 501 aaKnown RBP8.13□□□□□ -1.11
GABRB3-217ENST00000635832 TRPM3Q9HCF6 1732 aaPredicted RBP8.13□□□□□ -1.11
GABRB3-217ENST00000635832 NDUFA3O95167 84 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 EGR4Q05215 589 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 ABCA3Q99758 1704 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 EREGO14944 169 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 APOMO95445 188 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 IGLV3-19P01714 112 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 FAM89BQ8N5H3 189 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 TMEM105Q8N8V8 129 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 REPIN1Q9BWE0 567 aaKnown RBP8.13□□□□□ -1.11
GABRB3-217ENST00000635832 NRN1Q9NPD7 142 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 ZNF257Q9Y2Q1 563 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 IGHV3OR16-8A0A075B7F1 116 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 ZNF250P15622 560 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 C11orf44Q8N8P7 122 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 APC2O95996 2303 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 SPAG17Q6Q759 2223 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 TPRP12270 2363 aaKnown RBP8.13□□□□□ -1.11
GABRB3-217ENST00000635832 F12P00748 615 aaPredicted RBP8.13□□□□□ -1.11
GABRB3-217ENST00000635832 SLC25A16P16260 332 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 LINC00158P58513 81 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 IMMP1LQ96LU5 166 aa8.13□□□□□ -1.11
GABRB3-217ENST00000635832 TNRC6CQ9HCJ0 1690 aaKnown RBP8.12□□□□□ -1.11
GABRB3-217ENST00000635832 ASCC3Q8N3C0 2202 aaKnown RBP8.12□□□□□ -1.11
GABRB3-217ENST00000635832 IZUMO1RA6ND01 250 aa8.12□□□□□ -1.11
GABRB3-217ENST00000635832 WISP3O95389 354 aaPredicted RBP8.12□□□□□ -1.11
GABRB3-217ENST00000635832 UCP1P25874 307 aa8.12□□□□□ -1.11
GABRB3-217ENST00000635832 RPL36AP83881 106 aaKnown RBP8.12□□□□□ -1.11
GABRB3-217ENST00000635832 ZNF660Q6AZW8 331 aaPredicted RBP8.12□□□□□ -1.11
GABRB3-217ENST00000635832 SIGLEC15Q6ZMC9 328 aa8.12□□□□□ -1.11
GABRB3-217ENST00000635832 RPL36ALQ969Q0 106 aaKnown RBP8.12□□□□□ -1.11
GABRB3-217ENST00000635832 SPAG8Q99932 426 aaPredicted RBP8.12□□□□□ -1.11
GABRB3-217ENST00000635832 CCL3L1P16619 93 aa8.12□□□□□ -1.11
GABRB3-217ENST00000635832 C15orf61A6NNL5 157 aa8.12□□□□□ -1.11
GABRB3-217ENST00000635832 MINOS1Q5TGZ0 78 aa8.12□□□□□ -1.11
GABRB3-217ENST00000635832 MINOS1-NBL1R4GNA1 71 aa8.12□□□□□ -1.11
GABRB3-217ENST00000635832 F2Z2F3 143 aa8.12□□□□□ -1.11
GABRB3-217ENST00000635832 SRD5A1P18405 259 aa8.12□□□□□ -1.11
GABRB3-217ENST00000635832 RCC1LQ96I51 464 aaKnown RBP8.12□□□□□ -1.11
GABRB3-217ENST00000635832 SAA2-SAA4A0A096LPE2 208 aa8.11□□□□□ -1.11
GABRB3-217ENST00000635832 SAA2P0DJI9 122 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms