RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 RHOGP84095 191 aa11.9□□□□□ -0.5
SNRNP48-203ENST00000634363 ADAMTSL5Q6ZMM2 481 aa11.9□□□□□ -0.5
SNRNP48-203ENST00000634363 HSD17B13Q7Z5P4 300 aaPredicted RBP11.9□□□□□ -0.5
SNRNP48-203ENST00000634363 GLYATL2Q8WU03 294 aa11.9□□□□□ -0.5
SNRNP48-203ENST00000634363 RBPMSQ93062 196 aaKnown RBP11.9□□□□□ -0.5
SNRNP48-203ENST00000634363 TMEM230Q96A57 120 aa11.9□□□□□ -0.5
SNRNP48-203ENST00000634363 USMG5Q96IX5 58 aa11.9□□□□□ -0.5
SNRNP48-203ENST00000634363 TMEM14BQ9NUH8 114 aa11.9□□□□□ -0.5
SNRNP48-203ENST00000634363 IGLC7A0M8Q6 106 aa11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 CGB1A6NKQ9 187 aa11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 FAM223BA6NKX1 122 aa11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 CYB5BO43169 146 aa11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 CDS2O95674 445 aa11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 IGKV1-5P01602 117 aa11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 REG1AP05451 166 aa11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 MECP2P51608 486 aaKnown RBP11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 CCR6P51684 374 aa11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 DEFA5Q01523 94 aa11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 TMEM268Q5VZI3 342 aa11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 FAM223AQ8IWN6 122 aa11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 Q8N1Y9 231 aa11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 LSM10Q969L4 123 aaKnown RBP11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 GALNT14Q96FL9 552 aa11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 TMEM56Q96MV1 263 aa11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 PDCD10Q9BUL8 212 aa11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 WDR12Q9GZL7 423 aaKnown RBP11.89□□□□□ -0.51
SNRNP48-203ENST00000634363 PIGBOS1A0A0B4J2F0 54 aa11.88□□□□□ -0.51
SNRNP48-203ENST00000634363 OR2J3O76001 311 aa11.88□□□□□ -0.51
SNRNP48-203ENST00000634363 CRYGCP07315 174 aa11.88□□□□□ -0.51
SNRNP48-203ENST00000634363 HIST1H1BP16401 226 aaKnown RBP11.88□□□□□ -0.51
SNRNP48-203ENST00000634363 CTRB1P17538 263 aa11.88□□□□□ -0.51
SNRNP48-203ENST00000634363 SRPXP78539 464 aa11.88□□□□□ -0.51
SNRNP48-203ENST00000634363 TMEM128Q5BJH2 165 aa11.88□□□□□ -0.51
SNRNP48-203ENST00000634363 CTRB2Q6GPI1 263 aa11.88□□□□□ -0.51
SNRNP48-203ENST00000634363 FAM219AQ8IW50 185 aa11.88□□□□□ -0.51
SNRNP48-203ENST00000634363 CENPSQ8N2Z9 138 aa11.88□□□□□ -0.51
SNRNP48-203ENST00000634363 NECAP1Q8NC96 275 aa11.88□□□□□ -0.51
SNRNP48-203ENST00000634363 OR10W1Q8NGF6 305 aa11.88□□□□□ -0.51
SNRNP48-203ENST00000634363 NDUFA4L2Q9NRX3 87 aa11.88□□□□□ -0.51
SNRNP48-203ENST00000634363 TRBV9A0A0B4J1U6 114 aa11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 ANKRD34BA5PLL1 514 aa11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 DBX1A6NMT0 343 aa11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 NDUFB6O95139 128 aa11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 OR13C7P0DN81 318 aa11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 VAMP1P23763 118 aa11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 ATP5G2Q06055 141 aa11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 EXOSC2Q13868 293 aaKnown RBP11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 TMEM187Q14656 261 aa11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 ZNF846Q147U1 533 aa11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 IZUMO4Q1ZYL8 232 aa11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 C19orf35Q6ZS72 473 aa11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 SELENOHQ8IZQ5 122 aaKnown RBP11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 LHFPL5Q8TAF8 219 aa11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 IL22RA2Q969J5 263 aa11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 EDA2RQ9HAV5 297 aa11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 TMEM56-RWDD3S4R434 201 aa11.87□□□□□ -0.51
SNRNP48-203ENST00000634363 LYRM1O43325 122 aa11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 IFNA17P01571 189 aa11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 IGLV1-51P01701 117 aa11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 P0C879 139 aa11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 HSPE1P61604 102 aaKnown RBP11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 SUPT4H1P63272 117 aaKnown RBP11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 PRCDQ00LT1 54 aa11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 C15orf32Q32M92 178 aa11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 LGI3Q8N145 548 aa11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 SLC35G3Q8N808 338 aa11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 PLEKHA3Q9HB20 300 aa11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 RANGRFQ9HD47 186 aaPredicted RBP11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 C19orf73Q9NVV2 129 aa11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 PRR13Q9NZ81 148 aa11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 THYN1Q9P016 225 aa11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 FBXL7Q9UJT9 491 aa11.86□□□□□ -0.51
SNRNP48-203ENST00000634363 ZP3P21754 424 aa11.85□□□□□ -0.51
SNRNP48-203ENST00000634363 WT1-ASQ06250 92 aa11.85□□□□□ -0.51
SNRNP48-203ENST00000634363 FAM209BQ5JX69 171 aa11.85□□□□□ -0.51
SNRNP48-203ENST00000634363 ZNF343Q6P1L6 599 aa11.85□□□□□ -0.51
SNRNP48-203ENST00000634363 FANCD2OSQ96PS1 177 aa11.85□□□□□ -0.51
SNRNP48-203ENST00000634363 TUBA4BQ9H853 241 aa11.85□□□□□ -0.51
SNRNP48-203ENST00000634363 PEF1Q9UBV8 284 aaKnown RBP11.85□□□□□ -0.51
SNRNP48-203ENST00000634363 IGLV11-55A0A075B6I3 123 aa11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 A0A0B4J293 547 aa11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 A0A0B4J2A0 478 aa11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 A0A0G2JRQ6 117 aa11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 ST8SIA3O43173 380 aa11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 BTCP35070 178 aa11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 HOXA1P49639 335 aaPredicted RBP11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 UBE2MP61081 183 aaKnown RBP11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 ERHP84090 104 aaKnown RBP11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 PPP1R1AQ13522 171 aa11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 OR1L6Q8NGR2 347 aa11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 EEF1AKMT3Q96AZ1 226 aa11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 SPATA25Q9BR10 227 aa11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 ENY2Q9NPA8 101 aa11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 CACNG5Q9UF02 275 aa11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 SHPKQ9UHJ6 478 aa11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 F11RQ9Y624 299 aaKnown RBP11.84□□□□□ -0.51
SNRNP48-203ENST00000634363 A8MZ25 164 aa11.83□□□□□ -0.52
SNRNP48-203ENST00000634363 PLA2G10O15496 165 aa11.83□□□□□ -0.52
SNRNP48-203ENST00000634363 SFT2D2O95562 160 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms