RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 LGALS4P56470 323 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 ZNF90Q03938 601 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 PSG5Q15238 335 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 SSX2Q16385 188 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 IQCJQ1A5X6 159 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 KRTCAP3Q53RY4 240 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 MOB3BQ86TA1 216 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 SNRNP40Q96DI7 357 aaKnown RBP10.39□□□□□ -0.75
LINC00540-203ENST00000631321 FAM122AQ96E09 287 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 GAL3ST2Q9H3Q3 398 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 OR10J1P30954 320 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 TMEM256Q8N2U0 113 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 BEND2Q8NDZ0 799 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 CACNG8Q8WXS5 425 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 MRPL20Q9BYC9 149 aaKnown RBP10.39□□□□□ -0.75
LINC00540-203ENST00000631321 NDUFA4L2Q9NRX3 87 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 ZNRD1Q9P1U0 126 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 V9GYV3 84 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 TANC2Q9HCD6 1990 aa10.39□□□□□ -0.75
LINC00540-203ENST00000631321 H0YJW9 148 aa10.38□□□□□ -0.75
LINC00540-203ENST00000631321 ACTL6BO94805 426 aa10.38□□□□□ -0.75
LINC00540-203ENST00000631321 TNFRSF1AP19438 455 aa10.38□□□□□ -0.75
LINC00540-203ENST00000631321 RAB4BP61018 213 aa10.38□□□□□ -0.75
LINC00540-203ENST00000631321 CD69Q07108 199 aa10.38□□□□□ -0.75
LINC00540-203ENST00000631321 TMEM177Q53S58 311 aa10.38□□□□□ -0.75
LINC00540-203ENST00000631321 OR5AN1Q8NGI8 311 aa10.38□□□□□ -0.75
LINC00540-203ENST00000631321 SVILO95425 2214 aa10.38□□□□□ -0.75
LINC00540-203ENST00000631321 EP300Q09472 2414 aaPredicted RBP10.38□□□□□ -0.75
LINC00540-203ENST00000631321 ZNF705GA8MUZ8 300 aaPredicted RBP10.38□□□□□ -0.75
LINC00540-203ENST00000631321 SLC17A3O00476 420 aa10.38□□□□□ -0.75
LINC00540-203ENST00000631321 APOA2P02652 100 aa10.38□□□□□ -0.75
LINC00540-203ENST00000631321 ESDP10768 282 aa10.38□□□□□ -0.75
LINC00540-203ENST00000631321 NDUFB7P17568 137 aa10.38□□□□□ -0.75
LINC00540-203ENST00000631321 TAS2R45P59539 299 aa10.38□□□□□ -0.75
LINC00540-203ENST00000631321 TMEM108Q6UXF1 575 aa10.38□□□□□ -0.75
LINC00540-203ENST00000631321 NDUFAF3Q9BU61 184 aa10.38□□□□□ -0.75
LINC00540-203ENST00000631321 A0A1W2PRE2 83 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 NUPR1O60356 82 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 GNG4P50150 75 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 LBHQ53QV2 105 aaPredicted RBP10.37□□□□□ -0.75
LINC00540-203ENST00000631321 CENPWQ5EE01 88 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 FAM71F2Q6NXP2 309 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 TRBV9A0A0B4J1U6 114 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 A0A1B0GUS0 222 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 PSMB11A5LHX3 300 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 HELTA6NFD8 242 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 C17orf100A8MU93 164 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 K7EM74 188 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 DLL1O00548 723 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 CRYBB3P26998 211 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 ADIPOQQ15848 244 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 RPEL1Q2QD12 228 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 ZNF600Q6ZNG1 722 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 MMD2Q8IY49 270 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 C8orf31Q8N9H6 132 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 OR4A5Q8NH83 315 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 OR9G1Q8NH87 305 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 ZNF596Q8TC21 504 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 RND1Q92730 232 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 SLC25A33Q9BSK2 321 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 MRPL32Q9BYC8 188 aaKnown RBP10.37□□□□□ -0.75
LINC00540-203ENST00000631321 TP53TG3Q9ULZ0 132 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 CFAP47Q6ZTR5 3102 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 PLCE1Q9P212 2302 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 ASPMQ8IZT6 3477 aa10.37□□□□□ -0.75
LINC00540-203ENST00000631321 RAI1Q7Z5J4 1906 aaPredicted RBP10.36□□□□□ -0.75
LINC00540-203ENST00000631321 GGTLC3B5MD39 225 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 FCN3O75636 299 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 C8orf88P0DMB2 117 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 CBLN1P23435 193 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 GATA2P23769 480 aaPredicted RBP10.36□□□□□ -0.75
LINC00540-203ENST00000631321 RPL8P62917 257 aaKnown RBP10.36□□□□□ -0.75
LINC00540-203ENST00000631321 CCL8P80075 99 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 OR10W1Q8NGF6 305 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 HARBI1Q96MB7 349 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 ZNF714Q96N38 554 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 RNF2Q99496 336 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 C2orf88Q9BSF0 95 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 MRPL18Q9H0U6 180 aaKnown RBP10.36□□□□□ -0.75
LINC00540-203ENST00000631321 OSTCQ9NRP0 149 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 TNFRSF13BO14836 293 aaPredicted RBP10.36□□□□□ -0.75
LINC00540-203ENST00000631321 LINC00310P59036 64 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 ERVFC1-1P60608 527 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 MLANAQ16655 118 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 TMEM200BQ69YZ2 307 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 LINC00311Q8N616 119 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 OR1L6Q8NGR2 347 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 CMTM2Q8TAZ6 248 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 TMEM167AQ8TBQ9 72 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 WFIKKN1Q96NZ8 548 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 GNB1LQ9BYB4 327 aa10.36□□□□□ -0.75
LINC00540-203ENST00000631321 A0A1W2PN81 502 aa10.35□□□□□ -0.75
LINC00540-203ENST00000631321 DPRXA6NFQ7 191 aa10.35□□□□□ -0.75
LINC00540-203ENST00000631321 C16orf97H3BN30 126 aa10.35□□□□□ -0.75
LINC00540-203ENST00000631321 OR7C2O60412 319 aa10.35□□□□□ -0.75
LINC00540-203ENST00000631321 USF1P22415 310 aaPredicted RBP10.35□□□□□ -0.75
LINC00540-203ENST00000631321 PAFAH1B2P68402 229 aa10.35□□□□□ -0.75
LINC00540-203ENST00000631321 ERHP84090 104 aaKnown RBP10.35□□□□□ -0.75
LINC00540-203ENST00000631321 OR5I1Q13606 314 aa10.35□□□□□ -0.75
LINC00540-203ENST00000631321 FAM167A-AS1Q96KT0 104 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms