RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 OR2T10Q8NGZ9 312 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 CT45A3Q8NHU0 189 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 BRWD1-AS2P59051 145 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 CST9LP1Q5W188 147 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 TAF15Q92804 592 aaKnown RBP eCLIP10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 ITPR3Q14573 2671 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 FAM90A9PA6NNJ1 464 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 J3QLI3 93 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 FOLR2P14207 255 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 C17orf58Q2M2W7 97 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 HAPLN4Q86UW8 402 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 OR10G4Q8NGN3 311 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 OR10G9Q8NGN4 311 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 OR10G7Q8NGN6 311 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 METTL1Q9UBP6 276 aaKnown RBP10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 TIMM9Q9Y5J7 89 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 IGHV1-69DA0A0B4J2H0 117 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 ZNF727A8MUV8 499 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 H3BUX3 64 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 IGHV1-69P01742 117 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 P0C879 139 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 ZNF674Q2M3X9 581 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 SPINK9Q5DT21 86 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 S100A7AQ86SG5 101 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 OR4C12Q96R67 309 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 ECSCRQ19T08 205 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 TOLLIPQ9H0E2 274 aa10.12□□□□□ -0.79
SYNGAP1-207ENST00000628646 CTXND1A0A1B0GTU2 59 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 C17orf98A8MV24 154 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 ITGB1BP1O14713 200 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 TGOLN2O43493 480 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 UBE2E1P51965 193 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 TAS2R45P59539 299 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 TMEM219Q86XT9 240 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 VKORC1L1Q8N0U8 176 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 RARRES2Q99969 163 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 A0A1W2PN81 502 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 OR2C1O95371 312 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 CHRNA7P36544 502 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 ARL16Q0P5N6 197 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 PNRC1Q12796 327 aaPredicted RBP10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 ZNF429Q86V71 674 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 OR4C13Q8NGP0 309 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 TNFRSF14Q92956 283 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 MBD6Q96DN6 1003 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 HSPE1P61604 102 aaKnown RBP10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 RUNX1Q01196 453 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 MANBALQ9NQG1 85 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 VAX2Q9UIW0 290 aa10.11□□□□□ -0.79
SYNGAP1-207ENST00000628646 NPY1RP25929 384 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 SAV1Q9H4B6 383 aaPredicted RBP10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 BUB1B-PAK6H3BSN5 160 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 HSPB1P04792 205 aaKnown RBP10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 CDC34P49427 236 aaPredicted RBP10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 LINC00518Q8N0U6 118 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 HABP2Q14520 560 aaPredicted RBP10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 LRRC75BQ2VPJ9 315 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 TPTE2P1Q5T6R2 138 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 MINOS1Q5TGZ0 78 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 C15orf54Q8N8G6 183 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 JMJD8Q96S16 334 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 GGACTQ9BVM4 153 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 FBXL15Q9H469 300 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 MINOS1-NBL1R4GNA1 71 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 FLNAP21333 2647 aaKnown RBP10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 IGHV4-31P0DP07 118 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 IGHV4-38-2P0DP08 117 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 AWAT1Q58HT5 328 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 OR1L8Q8NGR8 309 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 C20orf24Q9BUV8 137 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 WDR61Q9GZS3 305 aaKnown RBP10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 TMEM140Q9NV12 185 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 HSPB7Q9UBY9 170 aa10.1□□□□□ -0.79
SYNGAP1-207ENST00000628646 KMT2BQ9UMN6 2715 aaPredicted RBP10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 B4DEV8 164 aa10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 CD1BP29016 333 aa10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 AKR1C3P42330 323 aa10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 MALSU1Q96EH3 234 aa10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 SMIM7Q9BQ49 75 aa10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 NPVFQ9HCQ7 196 aa10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 DUTP33316 252 aaKnown RBP10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 ZNF841Q6ZN19 808 aa10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 HIST1H2BAQ96A08 127 aa10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 TUBA4BQ9H853 241 aa10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 RPS10P46783 165 aaKnown RBP10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 FAM120AOSQ5T036 256 aa10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 CIARTQ8N365 385 aaPredicted RBP10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 OR4F5Q8NH21 305 aa10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 OR4F4Q96R69 305 aa10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 RSG1Q9BU20 258 aa10.09□□□□□ -0.79
SYNGAP1-207ENST00000628646 C15orf65H3BRN8 121 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 MOSP00540 346 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 FABP1P07148 127 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 LINC00205P59089 165 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 RHOBP62745 196 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 ETFRF1Q6IPR1 90 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 KCNIP4Q6PIL6 250 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 SLC25A48Q6ZT89 311 aaKnown RBP10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 IGFBPL1Q8WX77 278 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 SLC25A33Q9BSK2 321 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms