RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 OR1L8Q8NGR8 309 aa10.67□□□□□ -0.7
PNKP-218ENST00000625299 GIMAP1Q8WWP7 306 aa10.67□□□□□ -0.7
PNKP-218ENST00000625299 LSM10Q969L4 123 aaKnown RBP10.67□□□□□ -0.7
PNKP-218ENST00000625299 KRTAP4-5Q9BYR2 181 aa10.67□□□□□ -0.7
PNKP-218ENST00000625299 SLC5A7Q9GZV3 580 aa10.67□□□□□ -0.7
PNKP-218ENST00000625299 TPRKBQ9Y3C4 175 aa10.67□□□□□ -0.7
PNKP-218ENST00000625299 TRAV14DV4A0A0A6YYC5 116 aa10.66□□□□□ -0.7
PNKP-218ENST00000625299 DNASE2O00115 360 aaPredicted RBP10.66□□□□□ -0.7
PNKP-218ENST00000625299 CASQ2O14958 399 aaPredicted RBP10.66□□□□□ -0.7
PNKP-218ENST00000625299 RTL8CO15255 209 aa10.66□□□□□ -0.7
PNKP-218ENST00000625299 PPYP01298 95 aa10.66□□□□□ -0.7
PNKP-218ENST00000625299 EIF4EP06730 217 aaKnown RBP10.66□□□□□ -0.7
PNKP-218ENST00000625299 CTSGP08311 255 aa10.66□□□□□ -0.7
PNKP-218ENST00000625299 ERVK-16P61578 105 aa10.66□□□□□ -0.7
PNKP-218ENST00000625299 RPL11P62913 178 aaKnown RBP10.66□□□□□ -0.7
PNKP-218ENST00000625299 POU2AF1Q16633 256 aa10.66□□□□□ -0.7
PNKP-218ENST00000625299 OGFRL1Q5TC84 451 aaPredicted RBP10.66□□□□□ -0.7
PNKP-218ENST00000625299 AADACL3Q5VUY0 350 aa10.66□□□□□ -0.7
PNKP-218ENST00000625299 PVRIGQ6DKI7 326 aa10.66□□□□□ -0.7
PNKP-218ENST00000625299 ZNF773Q6PK81 442 aa10.66□□□□□ -0.7
PNKP-218ENST00000625299 STHQ8IWL8 128 aa10.66□□□□□ -0.7
PNKP-218ENST00000625299 ZBTB34Q8NCN2 500 aa10.66□□□□□ -0.7
PNKP-218ENST00000625299 ATP6V0BQ99437 205 aa10.66□□□□□ -0.7
PNKP-218ENST00000625299 NSG2Q9Y328 171 aa10.66□□□□□ -0.7
PNKP-218ENST00000625299 IGHV3-66A0A0C4DH42 116 aa10.65□□□□□ -0.7
PNKP-218ENST00000625299 FCER2P06734 321 aa10.65□□□□□ -0.7
PNKP-218ENST00000625299 MSMO1Q15800 293 aa10.65□□□□□ -0.7
PNKP-218ENST00000625299 FAM90A2PQ658T7 463 aa10.65□□□□□ -0.7
PNKP-218ENST00000625299 ZNF767PQ75MW2 155 aa10.65□□□□□ -0.7
PNKP-218ENST00000625299 TMEM17Q86X19 198 aa10.65□□□□□ -0.7
PNKP-218ENST00000625299 FAM24BQ8N5W8 94 aa10.65□□□□□ -0.7
PNKP-218ENST00000625299 BEST4Q8NFU0 473 aa10.65□□□□□ -0.7
PNKP-218ENST00000625299 MISP3Q96FF7 219 aa10.65□□□□□ -0.7
PNKP-218ENST00000625299 VCXQ9H320 206 aa10.65□□□□□ -0.7
PNKP-218ENST00000625299 PLEKHA2Q9HB19 425 aa10.65□□□□□ -0.7
PNKP-218ENST00000625299 OR51B2Q9Y5P1 312 aa10.65□□□□□ -0.7
PNKP-218ENST00000625299 AGRNO00468 2067 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 ST8SIA3O43173 380 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 IGHV3-48P01763 117 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 MIFP14174 115 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 ZNF818PQ6ZRF7 136 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 ZNF575Q86XF7 245 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 POM121L12Q8N7R1 296 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 ST8SIA2Q92186 375 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 SLC25A46Q96AG3 418 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 ZNF414Q96IQ9 312 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 OR10C1Q96KK4 312 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 RNF126Q9BV68 326 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 MS4A6AQ9H2W1 248 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 NDUFA4L2Q9NRX3 87 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 COMMD9Q9P000 198 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 RABAC1Q9UI14 185 aa10.64□□□□□ -0.71
PNKP-218ENST00000625299 ELOA3CA0A087WX78 387 aaPredicted RBP10.63□□□□□ -0.71
PNKP-218ENST00000625299 MARCH11A6NNE9 402 aa10.63□□□□□ -0.71
PNKP-218ENST00000625299 FGF2P09038 288 aa10.63□□□□□ -0.71
PNKP-218ENST00000625299 P0DMU3 169 aa10.63□□□□□ -0.71
PNKP-218ENST00000625299 FAM231AP0DMU4 169 aa10.63□□□□□ -0.71
PNKP-218ENST00000625299 FAM231CP0DMU5 169 aa10.63□□□□□ -0.71
PNKP-218ENST00000625299 C22orf42Q6IC83 251 aa10.63□□□□□ -0.71
PNKP-218ENST00000625299 DGCR14Q96DF8 476 aaKnown RBP10.63□□□□□ -0.71
PNKP-218ENST00000625299 DUSP21Q9H596 190 aa10.63□□□□□ -0.71
PNKP-218ENST00000625299 DEFB131BA0A096LNP1 70 aa10.62□□□□□ -0.71
PNKP-218ENST00000625299 SNAPC5O75971 98 aa10.62□□□□□ -0.71
PNKP-218ENST00000625299 SCGNO76038 276 aa10.62□□□□□ -0.71
PNKP-218ENST00000625299 DFFBO76075 338 aa10.62□□□□□ -0.71
PNKP-218ENST00000625299 APOHP02749 345 aaPredicted RBP10.62□□□□□ -0.71
PNKP-218ENST00000625299 AMBPP02760 352 aa10.62□□□□□ -0.71
PNKP-218ENST00000625299 C4BPBP20851 252 aa10.62□□□□□ -0.71
PNKP-218ENST00000625299 MFAP4P55083 255 aa10.62□□□□□ -0.71
PNKP-218ENST00000625299 TMEM56Q96MV1 263 aa10.62□□□□□ -0.71
PNKP-218ENST00000625299 GINS3Q9BRX5 216 aa10.62□□□□□ -0.71
PNKP-218ENST00000625299 NXF2Q9GZY0 626 aaKnown RBP10.62□□□□□ -0.71
PNKP-218ENST00000625299 CLEC5AQ9NY25 188 aa10.62□□□□□ -0.71
PNKP-218ENST00000625299 PLA2G2EQ9NZK7 142 aa10.62□□□□□ -0.71
PNKP-218ENST00000625299 CELA1Q9UNI1 258 aa10.62□□□□□ -0.71
PNKP-218ENST00000625299 IGLV2-18A0A075B6J9 118 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 GNG7O60262 68 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 KRASP01116 189 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 RLN1P04808 185 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 CD5P06127 495 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 GIG44P09565 113 aaPredicted RBP10.61□□□□□ -0.71
PNKP-218ENST00000625299 G6PCP35575 357 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 ZNF367Q7RTV3 350 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 PRSS48Q7RTY5 328 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 LILRB2Q8N423 598 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 TSPAN14Q8NG11 270 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 OR1P1Q8NH06 330 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 LGALS14Q8TCE9 139 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 PINX1Q96BK5 328 aaKnown RBP10.61□□□□□ -0.71
PNKP-218ENST00000625299 NDUFAF3Q9BU61 184 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 SCRT1Q9BWW7 348 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 DAPK2Q9UIK4 370 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 X6R8D5 127 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 HSPG2P98160 4391 aa10.61□□□□□ -0.71
PNKP-218ENST00000625299 TRDV1A0A1B0GX56 115 aa10.6□□□□□ -0.71
PNKP-218ENST00000625299 KNCNA6PVL3 124 aa10.6□□□□□ -0.71
PNKP-218ENST00000625299 NOTOA8MTQ0 251 aa10.6□□□□□ -0.71
PNKP-218ENST00000625299 ZNF705EA8MWA4 302 aaPredicted RBP10.6□□□□□ -0.71
PNKP-218ENST00000625299 I3L2K1 104 aa10.6□□□□□ -0.71
PNKP-218ENST00000625299 MT-CO2P00403 227 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms