RNA–Protein interactions for RNA: ENST00000623219.3

LINC00643-205, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 962 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-205ENST00000623219 CBLN1P23435 193 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 MFAP2P55001 183 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 CD81P60033 236 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 PRCDQ00LT1 54 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 IL18Q14116 193 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 SCGB2B2Q4G0G5 96 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 PLET1Q6UQ28 207 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 ZNF114Q8NC26 417 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 OR13C8Q8NGS7 320 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 OR1P1Q8NH06 330 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 CACNG8Q8WXS5 425 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 ISOC1Q96CN7 298 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 BSCL2Q96G97 398 aaPredicted RBP11.19□□□□□ -0.62
LINC00643-205ENST00000623219 DIRAS2Q96HU8 199 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 TP53RKQ96S44 253 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 TM2D3Q9BRN9 247 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 ZNF436Q9C0F3 470 aaPredicted RBP11.19□□□□□ -0.62
LINC00643-205ENST00000623219 C6orf62Q9GZU0 229 aaPredicted RBP11.19□□□□□ -0.62
LINC00643-205ENST00000623219 COPZ2Q9P299 210 aa11.19□□□□□ -0.62
LINC00643-205ENST00000623219 C3orf85A0A1B0GTC6 90 aa11.18□□□□□ -0.62
LINC00643-205ENST00000623219 ZNF320A2RRD8 509 aa11.18□□□□□ -0.62
LINC00643-205ENST00000623219 OR2T8A6NH00 312 aa11.18□□□□□ -0.62
LINC00643-205ENST00000623219 B3GALNT1O75752 331 aa11.18□□□□□ -0.62
LINC00643-205ENST00000623219 ATG12O94817 140 aa11.18□□□□□ -0.62
LINC00643-205ENST00000623219 AKR1C2P52895 323 aa11.18□□□□□ -0.62
LINC00643-205ENST00000623219 ELLP55199 621 aaPredicted RBP11.18□□□□□ -0.62
LINC00643-205ENST00000623219 SPSB3Q6PJ21 355 aa11.18□□□□□ -0.62
LINC00643-205ENST00000623219 UNQ9165/PRO28630Q6UXU0 137 aa11.18□□□□□ -0.62
LINC00643-205ENST00000623219 MARC2Q969Z3 335 aa11.18□□□□□ -0.62
LINC00643-205ENST00000623219 SLIRPQ9GZT3 109 aaKnown RBP11.18□□□□□ -0.62
LINC00643-205ENST00000623219 SLC2A8Q9NY64 477 aa11.18□□□□□ -0.62
LINC00643-205ENST00000623219 C21orf62Q9NYP8 219 aa11.18□□□□□ -0.62
LINC00643-205ENST00000623219 DISC1C4P0D8 188 aa11.17□□□□□ -0.62
LINC00643-205ENST00000623219 K7EIM0 57 aa11.17□□□□□ -0.62
LINC00643-205ENST00000623219 CTSDP07339 412 aaPredicted RBP11.17□□□□□ -0.62
LINC00643-205ENST00000623219 P0C879 139 aa11.17□□□□□ -0.62
LINC00643-205ENST00000623219 AKAIN1P0CW23 69 aa11.17□□□□□ -0.62
LINC00643-205ENST00000623219 ZNF57Q68EA5 555 aaPredicted RBP11.17□□□□□ -0.62
LINC00643-205ENST00000623219 FAAP20Q6NZ36 180 aa11.17□□□□□ -0.62
LINC00643-205ENST00000623219 OR2C3Q8N628 320 aa11.17□□□□□ -0.62
LINC00643-205ENST00000623219 MARCH1Q8TCQ1 289 aa11.17□□□□□ -0.62
LINC00643-205ENST00000623219 SCARB1Q8WTV0 552 aa11.17□□□□□ -0.62
LINC00643-205ENST00000623219 TMEM190Q8WZ59 177 aa11.17□□□□□ -0.62
LINC00643-205ENST00000623219 NEURL2Q9BR09 285 aa11.17□□□□□ -0.62
LINC00643-205ENST00000623219 PLEKHA3Q9HB20 300 aa11.17□□□□□ -0.62
LINC00643-205ENST00000623219 MLXQ9UH92 298 aa11.17□□□□□ -0.62
LINC00643-205ENST00000623219 UFC1Q9Y3C8 167 aa11.17□□□□□ -0.62
LINC00643-205ENST00000623219 ZNF785A8K8V0 405 aa11.16□□□□□ -0.62
LINC00643-205ENST00000623219 F8W735 103 aaPredicted RBP11.16□□□□□ -0.62
LINC00643-205ENST00000623219 GSTZ1O43708 216 aaPredicted RBP11.16□□□□□ -0.62
LINC00643-205ENST00000623219 IGKV1-5P01602 117 aa11.16□□□□□ -0.62
LINC00643-205ENST00000623219 UCP1P25874 307 aa11.16□□□□□ -0.62
LINC00643-205ENST00000623219 HSPE1P61604 102 aaKnown RBP11.16□□□□□ -0.62
LINC00643-205ENST00000623219 SURF2Q15527 256 aaPredicted RBP11.16□□□□□ -0.62
LINC00643-205ENST00000623219 GUCA2BQ16661 112 aa11.16□□□□□ -0.62
LINC00643-205ENST00000623219 TRIM16LQ309B1 348 aa11.16□□□□□ -0.62
LINC00643-205ENST00000623219 BTNL8Q6UX41 500 aa11.16□□□□□ -0.62
LINC00643-205ENST00000623219 TMEM61Q8N0U2 210 aa11.16□□□□□ -0.62
LINC00643-205ENST00000623219 OR4C16Q8NGL9 310 aa11.16□□□□□ -0.62
LINC00643-205ENST00000623219 WDR89Q96FK6 387 aaPredicted RBP11.16□□□□□ -0.62
LINC00643-205ENST00000623219 TUBA4BQ9H853 241 aa11.16□□□□□ -0.62
LINC00643-205ENST00000623219 GAR1Q9NY12 217 aaKnown RBP11.16□□□□□ -0.62
LINC00643-205ENST00000623219 RSL24D1Q9UHA3 163 aaKnown RBP11.16□□□□□ -0.62
LINC00643-205ENST00000623219 C14orf166Q9Y224 244 aaKnown RBP11.16□□□□□ -0.62
LINC00643-205ENST00000623219 IGHV3-35A0A0C4DH35 117 aa11.15□□□□□ -0.62
LINC00643-205ENST00000623219 NDUFA4O00483 81 aa11.15□□□□□ -0.62
LINC00643-205ENST00000623219 CD7P09564 240 aa11.15□□□□□ -0.62
LINC00643-205ENST00000623219 C8orf88P0DMB2 117 aa11.15□□□□□ -0.62
LINC00643-205ENST00000623219 ERHP84090 104 aaKnown RBP11.15□□□□□ -0.62
LINC00643-205ENST00000623219 TM4SF20Q53R12 229 aa11.15□□□□□ -0.62
LINC00643-205ENST00000623219 Q56UQ5 140 aa11.15□□□□□ -0.62
LINC00643-205ENST00000623219 SLC35G3Q8N808 338 aa11.15□□□□□ -0.62
LINC00643-205ENST00000623219 UBAC2Q8NBM4 344 aa11.15□□□□□ -0.62
LINC00643-205ENST00000623219 UXS1Q8NBZ7 420 aa11.15□□□□□ -0.62
LINC00643-205ENST00000623219 PRRT1Q99946 306 aa11.15□□□□□ -0.62
LINC00643-205ENST00000623219 PDCD10Q9BUL8 212 aa11.15□□□□□ -0.62
LINC00643-205ENST00000623219 NXF2Q9GZY0 626 aaKnown RBP11.15□□□□□ -0.62
LINC00643-205ENST00000623219 DAZ1Q9NQZ3 744 aaKnown RBP11.15□□□□□ -0.62
LINC00643-205ENST00000623219 MRPL27Q9P0M9 148 aaKnown RBP11.15□□□□□ -0.62
LINC00643-205ENST00000623219 CSMD3Q7Z407 3707 aa11.14□□□□□ -0.63
LINC00643-205ENST00000623219 IGHV3-21A0A0B4J1V1 117 aa11.14□□□□□ -0.63
LINC00643-205ENST00000623219 ANKRD20A5PA0PJZ0 165 aa11.14□□□□□ -0.63
LINC00643-205ENST00000623219 INS-IGF2F8WCM5 200 aa11.14□□□□□ -0.63
LINC00643-205ENST00000623219 FCGR2BP31994 310 aaPredicted RBP11.14□□□□□ -0.63
LINC00643-205ENST00000623219 IZUMO4Q1ZYL8 232 aa11.14□□□□□ -0.63
LINC00643-205ENST00000623219 SP6Q3SY56 376 aa11.14□□□□□ -0.63
LINC00643-205ENST00000623219 MCFD2Q8NI22 146 aa11.14□□□□□ -0.63
LINC00643-205ENST00000623219 RRNAD1Q96FB5 475 aaKnown RBP11.14□□□□□ -0.63
LINC00643-205ENST00000623219 MISP3Q96FF7 219 aa11.14□□□□□ -0.63
LINC00643-205ENST00000623219 SPATA25Q9BR10 227 aa11.14□□□□□ -0.63
LINC00643-205ENST00000623219 TMEM222Q9H0R3 208 aa11.14□□□□□ -0.63
LINC00643-205ENST00000623219 TRAV25A0A0B4J276 109 aa11.13□□□□□ -0.63
LINC00643-205ENST00000623219 C3orf84H3BNL1 204 aa11.13□□□□□ -0.63
LINC00643-205ENST00000623219 I3L2K1 104 aa11.13□□□□□ -0.63
LINC00643-205ENST00000623219 ST8SIA3O43173 380 aa11.13□□□□□ -0.63
LINC00643-205ENST00000623219 OR5AC1P0C628 307 aa11.13□□□□□ -0.63
LINC00643-205ENST00000623219 ADMP35318 185 aa11.13□□□□□ -0.63
LINC00643-205ENST00000623219 HAGHQ16775 308 aa11.13□□□□□ -0.63
LINC00643-205ENST00000623219 SLC16A13Q7RTY0 426 aa11.13□□□□□ -0.63
LINC00643-205ENST00000623219 FAM219AQ8IW50 185 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms