RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 SCO2A0A1W2PP80 73 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 A0A1W2PPQ1 181 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 MT-CO2P00403 227 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 APOA2P02652 100 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 CCL3L1P16619 93 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 DLX6P56179 175 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 GAMTQ14353 236 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 ASCL5Q7RTU5 278 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 DMRTC2Q8IXT2 367 aaPredicted RBP7.66□□□□□ -1.18
PDPN-212ENST00000621990 OR10D4PQ8NGN7 298 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 ST6GALNAC6Q969X2 333 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 SFRP2Q96HF1 295 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 TMEM106BQ9NUM4 274 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 LY96Q9Y6Y9 160 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 PRSS47A8MTI9 375 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 SHISA9B4DS77 424 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 C9JCJ5 164 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 PDPNQ86YL7 162 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 TMEM167AQ8TBQ9 72 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 RNASEH2CQ8TDP1 164 aaKnown RBP7.66□□□□□ -1.18
PDPN-212ENST00000621990 CACNG8Q8WXS5 425 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 RND1Q92730 232 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 RNASE6Q93091 150 aaKnown RBP7.66□□□□□ -1.18
PDPN-212ENST00000621990 FUT9Q9Y231 359 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 ZGRF1Q86YA3 2104 aa7.66□□□□□ -1.18
PDPN-212ENST00000621990 FOXH1O75593 365 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 C1QTNF9P0C862 333 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 CHRNA7P36544 502 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 RPL15P61313 204 aaKnown RBP7.65□□□□□ -1.18
PDPN-212ENST00000621990 CD69Q07108 199 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 TBR1Q16650 682 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 OR4C13Q8NGP0 309 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 TMEM186Q96B77 213 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 HARBI1Q96MB7 349 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 HINT2Q9BX68 163 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 CTSZQ9UBR2 303 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 VSTM5A8MXK1 200 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 NDUFB3O43676 98 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 OR5G3P0C626 314 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 USF1P22415 310 aaPredicted RBP7.65□□□□□ -1.18
PDPN-212ENST00000621990 IL3RAP26951 378 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 LOXP28300 417 aaPredicted RBP7.65□□□□□ -1.18
PDPN-212ENST00000621990 GPX4P36969 197 aaPredicted RBP7.65□□□□□ -1.18
PDPN-212ENST00000621990 RPL8P62917 257 aaKnown RBP7.65□□□□□ -1.18
PDPN-212ENST00000621990 LRRC10Q5BKY1 277 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 TEX38Q6PEX7 206 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 MIR17HGQ75NE6 70 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 OR1P1Q8NH06 330 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 WFIKKN1Q96NZ8 548 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 NABP2Q9BQ15 211 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 LRFN3Q9BTN0 628 aa7.65□□□□□ -1.18
PDPN-212ENST00000621990 MUC6Q6W4X9 2439 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 PSMB11A5LHX3 300 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 PGPEP1LA6NFU8 196 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 IGLV2-23P01705 113 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 FABP4P15090 132 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 HIST1H1BP16401 226 aaKnown RBP7.65□□□□□ -1.19
PDPN-212ENST00000621990 SSX2Q16385 188 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 TMEM155Q4W5P6 130 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 PDZD11Q5EBL8 140 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 FAM78BQ5VT40 261 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 LYPD2Q6UXB3 125 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 MOB3BQ86TA1 216 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 SPACA3Q8IXA5 215 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 OR4P4Q8NGL7 312 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 OCC1Q8TAD7 63 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 VSTM2AQ8TAG5 236 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 CCL17Q92583 94 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 FLYWCH2Q96CP2 140 aaKnown RBP7.65□□□□□ -1.19
PDPN-212ENST00000621990 ZNF503Q96F45 646 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 PACRGQ96M98 296 aaPredicted RBP7.65□□□□□ -1.19
PDPN-212ENST00000621990 NGBQ9NPG2 151 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 TMEM167BQ9NRX6 74 aa7.65□□□□□ -1.19
PDPN-212ENST00000621990 ACACAQ13085 2346 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 TRAV9-1A0A075B6T8 112 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 CGB1A6NKQ9 187 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 E7EQL1 145 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 DLL1O00548 723 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 DVL1O14640 695 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 OR10W1Q8NGF6 305 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 FAM122AQ96E09 287 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 COMMD5Q9GZQ3 224 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 PRDM13Q9H4Q3 707 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 A0A1W2PN81 502 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 XKRY2A2RUG3 117 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 K7EN84 100 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 K7ENP7 123 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 COL8A2P25067 703 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 CHRNB4P30926 498 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 CDPF1Q6NVV7 123 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 PQLC2Q6ZP29 291 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 C11orf42Q8N5U0 333 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 OR10X1Q8NGY0 326 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 UHRF2Q96PU4 802 aa7.64□□□□□ -1.19
PDPN-212ENST00000621990 AURKAIP1Q9NWT8 199 aaPredicted RBP7.64□□□□□ -1.19
PDPN-212ENST00000621990 TECRQ9NZ01 308 aaKnown RBP7.64□□□□□ -1.19
PDPN-212ENST00000621990 PIEZO2Q9H5I5 2752 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 TMEM238LA0A1B0GVL6 79 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 MDFIC2A0A1B0GVS7 189 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 FSTL3O95633 263 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 360.8 ms