RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 NPVFQ9HCQ7 196 aa14.25□□□□□ -0.13
FAM3A-222ENST00000621967 DYNLRB1Q9NP97 96 aa14.25□□□□□ -0.13
FAM3A-222ENST00000621967 IL19Q9UHD0 177 aa14.25□□□□□ -0.13
FAM3A-222ENST00000621967 ARL14EPLP0DKL9 152 aa14.24□□□□□ -0.13
FAM3A-222ENST00000621967 HIST1H1BP16401 226 aaKnown RBP14.24□□□□□ -0.13
FAM3A-222ENST00000621967 HSPE1P61604 102 aaKnown RBP14.24□□□□□ -0.13
FAM3A-222ENST00000621967 ARSJQ5FYB0 599 aaPredicted RBP14.24□□□□□ -0.13
FAM3A-222ENST00000621967 DUX4L9Q6RFH8 374 aaPredicted RBP14.24□□□□□ -0.13
FAM3A-222ENST00000621967 ZNF383Q8NA42 475 aa14.24□□□□□ -0.13
FAM3A-222ENST00000621967 OR2T10Q8NGZ9 312 aa14.24□□□□□ -0.13
FAM3A-222ENST00000621967 GAFA1Q96PS6 74 aa14.24□□□□□ -0.13
FAM3A-222ENST00000621967 TRGV10A0A0A0MS01 117 aa14.23□□□□□ -0.13
FAM3A-222ENST00000621967 ZNF729A6NN14 1252 aaPredicted RBP14.23□□□□□ -0.13
FAM3A-222ENST00000621967 CXorf1O96002 111 aa14.23□□□□□ -0.13
FAM3A-222ENST00000621967 IGHV1-46P01743 117 aa14.23□□□□□ -0.13
FAM3A-222ENST00000621967 UBE2G2P60604 165 aa14.23□□□□□ -0.13
FAM3A-222ENST00000621967 PRDM13Q9H4Q3 707 aa14.23□□□□□ -0.13
FAM3A-222ENST00000621967 A0A1W2PPQ1 181 aa14.23□□□□□ -0.13
FAM3A-222ENST00000621967 IL6RP08887 468 aaPredicted RBP14.23□□□□□ -0.13
FAM3A-222ENST00000621967 NPY1RP25929 384 aa14.23□□□□□ -0.13
FAM3A-222ENST00000621967 MRPS11P82912 194 aaKnown RBP14.23□□□□□ -0.13
FAM3A-222ENST00000621967 TNFAIP6P98066 277 aaPredicted RBP14.23□□□□□ -0.13
FAM3A-222ENST00000621967 TMEM30BQ3MIR4 351 aa14.23□□□□□ -0.13
FAM3A-222ENST00000621967 ACTL10Q5JWF8 245 aa14.23□□□□□ -0.13
FAM3A-222ENST00000621967 CST9LP1Q5W188 147 aa14.23□□□□□ -0.13
FAM3A-222ENST00000621967 SLC24A4Q8NFF2 622 aa14.23□□□□□ -0.13
FAM3A-222ENST00000621967 OR1P1Q8NH06 330 aa14.23□□□□□ -0.13
FAM3A-222ENST00000621967 CBLN4Q9NTU7 201 aa14.23□□□□□ -0.13
FAM3A-222ENST00000621967 IDI2-AS1Q9NZ38 188 aa14.23□□□□□ -0.13
FAM3A-222ENST00000621967 LRBAP50851 2863 aa14.23□□□□□ -0.13
FAM3A-222ENST00000621967 FNDC10F2Z333 226 aa14.22□□□□□ -0.13
FAM3A-222ENST00000621967 NDUFB4O95168 129 aa14.22□□□□□ -0.13
FAM3A-222ENST00000621967 LCN2P80188 198 aa14.22□□□□□ -0.13
FAM3A-222ENST00000621967 FAM209BQ5JX69 171 aa14.22□□□□□ -0.13
FAM3A-222ENST00000621967 ZNF788Q6ZQV5 615 aa14.22□□□□□ -0.13
FAM3A-222ENST00000621967 CORO2AQ92828 525 aa14.22□□□□□ -0.13
FAM3A-222ENST00000621967 PACRGQ96M98 296 aaPredicted RBP14.22□□□□□ -0.13
FAM3A-222ENST00000621967 DERL1Q9BUN8 251 aa14.22□□□□□ -0.13
FAM3A-222ENST00000621967 TNFSF4P23510 183 aa14.21□□□□□ -0.13
FAM3A-222ENST00000621967 PDLIM4P50479 330 aa14.21□□□□□ -0.13
FAM3A-222ENST00000621967 KCNIP4Q6PIL6 250 aa14.21□□□□□ -0.13
FAM3A-222ENST00000621967 TEPPQ6URK8 271 aa14.21□□□□□ -0.13
FAM3A-222ENST00000621967 TMEM144Q7Z5S9 345 aa14.21□□□□□ -0.13
FAM3A-222ENST00000621967 LYG1Q8N1E2 194 aa14.21□□□□□ -0.13
FAM3A-222ENST00000621967 ACY3Q96HD9 319 aa14.21□□□□□ -0.13
FAM3A-222ENST00000621967 IMMP2LQ96T52 175 aa14.21□□□□□ -0.13
FAM3A-222ENST00000621967 PFDN5Q99471 154 aa14.21□□□□□ -0.13
FAM3A-222ENST00000621967 CENPEQ02224 2701 aa14.21□□□□□ -0.13
FAM3A-222ENST00000621967 RPL29P47914 159 aaKnown RBP14.21□□□□□ -0.14
FAM3A-222ENST00000621967 HIST2H2BCQ6DN03 193 aa14.21□□□□□ -0.14
FAM3A-222ENST00000621967 LURAP1LQ8IV03 231 aa14.21□□□□□ -0.14
FAM3A-222ENST00000621967 RNASEH2CQ8TDP1 164 aaKnown RBP14.21□□□□□ -0.14
FAM3A-222ENST00000621967 CHODLQ9H9P2 273 aa14.21□□□□□ -0.14
FAM3A-222ENST00000621967 TRBV23-1A0A0A0MS06 115 aa14.2□□□□□ -0.14
FAM3A-222ENST00000621967 CA2P00918 260 aa14.2□□□□□ -0.14
FAM3A-222ENST00000621967 CHRNA7P36544 502 aa14.2□□□□□ -0.14
FAM3A-222ENST00000621967 TEX36Q5VZQ5 186 aa14.2□□□□□ -0.14
FAM3A-222ENST00000621967 SLC25A48Q6ZT89 311 aaKnown RBP14.2□□□□□ -0.14
FAM3A-222ENST00000621967 DTX2Q86UW9 622 aa14.2□□□□□ -0.14
FAM3A-222ENST00000621967 ZNF257Q9Y2Q1 563 aa14.2□□□□□ -0.14
FAM3A-222ENST00000621967 TRBV20OR9-2A0A075B6H5 130 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 C17orf100A8MU93 164 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 FAM216BQ8N7L0 139 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 STPG3Q8N7X2 389 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 ZNF114Q8NC26 417 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 SSMEM1Q8WWF3 244 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 BTF3L4Q96K17 158 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 ENY2Q9NPA8 101 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 RPUSD1Q9UJJ7 312 aaKnown RBP14.19□□□□□ -0.14
FAM3A-222ENST00000621967 PRNDQ9UKY0 176 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 NBPF19A0A087WUL8 3843 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 XKRY2A2RUG3 117 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 AMBPP02760 352 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 IL3RAP26951 378 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 GCHFRP30047 84 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 RHOBP62745 196 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 PRR20EP86478 221 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 PRR20CP86479 221 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 PRR20DP86480 221 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 PRR20BP86481 221 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 PRR20AP86496 221 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 FOXL1Q12952 345 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 CLEC12BQ2HXU8 276 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 ZCCHC24Q8N2G6 241 aaKnown RBP14.19□□□□□ -0.14
FAM3A-222ENST00000621967 CCL13Q99616 98 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 OR51B2Q9Y5P1 312 aa14.19□□□□□ -0.14
FAM3A-222ENST00000621967 DVL1O14640 695 aa14.18□□□□□ -0.14
FAM3A-222ENST00000621967 MMP23AO75900 390 aa14.18□□□□□ -0.14
FAM3A-222ENST00000621967 PPOXP50336 477 aa14.18□□□□□ -0.14
FAM3A-222ENST00000621967 PRCDQ00LT1 54 aa14.18□□□□□ -0.14
FAM3A-222ENST00000621967 FAM78BQ5VT40 261 aa14.18□□□□□ -0.14
FAM3A-222ENST00000621967 C11orf71Q6IPW1 123 aa14.18□□□□□ -0.14
FAM3A-222ENST00000621967 OR5T1Q8NG75 326 aa14.18□□□□□ -0.14
FAM3A-222ENST00000621967 OR5R1Q8NH85 324 aa14.18□□□□□ -0.14
FAM3A-222ENST00000621967 SEPSECSQ9HD40 501 aaKnown RBP14.18□□□□□ -0.14
FAM3A-222ENST00000621967 YTHDF2Q9Y5A9 579 aaKnown RBP14.18□□□□□ -0.14
FAM3A-222ENST00000621967 CELSR2Q9HCU4 2923 aa14.18□□□□□ -0.14
FAM3A-222ENST00000621967 AKAP6Q13023 2319 aa14.18□□□□□ -0.14
FAM3A-222ENST00000621967 SCO2A0A1W2PP80 73 aa14.17□□□□□ -0.14
FAM3A-222ENST00000621967 UPK2O00526 184 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms