RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 FCGR2CP31995 323 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 RAB9AP51151 201 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 SLURP1P55000 103 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 PIGPP57054 158 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 S100A10P60903 97 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 SLC25A48Q6ZT89 311 aaKnown RBP6.05□□□□□ -1.44
CLK1-215ENST00000621181 SPAG16Q8N0X2 631 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 C8orf31Q8N9H6 132 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 NEK7Q8TDX7 302 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 GLYATL2Q8WU03 294 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 ARPC1AQ92747 370 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 MOB3AQ96BX8 217 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 NARS2Q96I59 477 aaKnown RBP6.05□□□□□ -1.44
CLK1-215ENST00000621181 S100A13Q99584 98 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 CMSS1Q9BQ75 279 aaKnown RBP6.05□□□□□ -1.44
CLK1-215ENST00000621181 TM2D3Q9BRN9 247 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 PLEKHA2Q9HB19 425 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 ST3GAL6Q9Y274 331 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 PRELID3BQ9Y3B1 194 aa6.05□□□□□ -1.44
CLK1-215ENST00000621181 F8W036 122 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 C15orf65H3BRN8 121 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 PDCD6O75340 191 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 JTBO76095 146 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 OR5AC1P0C628 307 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 OR8U9P0C7N5 309 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 RBM11P57052 281 aaKnown RBP6.04□□□□□ -1.44
CLK1-215ENST00000621181 BLOC1S1P78537 153 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 KIAA0141Q14154 515 aaPredicted RBP6.04□□□□□ -1.44
CLK1-215ENST00000621181 EIF5AL1Q6IS14 154 aaKnown RBP6.04□□□□□ -1.44
CLK1-215ENST00000621181 TMEM88Q6PEY1 159 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 CBLN2Q8IUK8 224 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 PRR18Q8N4B5 295 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 OR4C12Q96R67 309 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 GINS3Q9BRX5 216 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 TMEM231Q9H6L2 316 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 EDA2RQ9HAV5 297 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 OR2S2Q9NQN1 319 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 ZC4H2Q9NQZ6 224 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 TRAV41A0A0B4J266 112 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 FAM90A10PA6NDY2 464 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 FAM90A7PA6NKC0 464 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 FAM90A23PA8MXZ1 464 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 E5RGE8 158 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 LINC01619G3V211 115 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 SLC31A2O15432 143 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 SPINT2O43291 252 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 MED6O75586 246 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 IFNA21P01568 189 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 IGLV1-40P01703 118 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 ZNF137PP52743 207 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 SP6Q3SY56 376 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 Q3ZCU0 254 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 ACSM6Q6P461 480 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 LYZL2Q7Z4W2 148 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 LINC00518Q8N0U6 118 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 OR10V1Q8NGI7 309 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 OR4D5Q8NGN0 318 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 ZNF251Q9BRH9 671 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 HRH4Q9H3N8 390 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 IFT22Q9H7X7 185 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 RAB9BQ9NP90 201 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 SLC2A9Q9NRM0 540 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 TRAPPC2LQ9UL33 140 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 NSG2Q9Y328 171 aa6.04□□□□□ -1.44
CLK1-215ENST00000621181 ELOA3CA0A087WX78 387 aaPredicted RBP6.03□□□□□ -1.44
CLK1-215ENST00000621181 IGHV7-81A0A0B4J1V7 117 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 A0A1W2PN81 502 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 COLCA2A8K830 154 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 SNAPINO95295 136 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 NAPSAO96009 420 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 HLA-DRB1P01911 266 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 SEC11BP0C7V7 166 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 SPP1P10451 314 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 FUT3P21217 361 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 AADACP22760 399 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 CHRNA7P36544 502 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 P2RY1P47900 373 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 RND3P61587 244 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 ECSCRQ19T08 205 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 LINC00596Q86U02 117 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 LYSTQ99698 3801 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 TOLLIPQ9H0E2 274 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 TREM1Q9NP99 234 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 CACFD1Q9UGQ2 172 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 KCNIP3Q9Y2W7 256 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 EPPK1P58107 5090 aaKnown RBP6.03□□□□□ -1.44
CLK1-215ENST00000621181 RYR2Q92736 4967 aa6.03□□□□□ -1.44
CLK1-215ENST00000621181 DNAH7Q8WXX0 4024 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 IGHV4OR15-8A0A075B7B6 117 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 A0A087WW49 117 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 NBR2O15453 112 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 HSPA12AO43301 675 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 TUSC2O75896 110 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 LGALS1P09382 135 aaKnown RBP6.02□□□□□ -1.45
CLK1-215ENST00000621181 SFTA3P0C7M3 94 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 FOLR2P14207 255 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 GNRHRP30968 328 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 ZNF134P52741 427 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 MPV17LQ2QL34 196 aa6.02□□□□□ -1.45
CLK1-215ENST00000621181 CT45A1Q5HYN5 189 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms