RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 GTF2H5Q6ZYL4 71 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 NHLRC2Q8NBF2 726 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 RPEQ96AT9 228 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 MIEN1Q9BRT3 115 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 AGMATQ9BSE5 352 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 PRDM14Q9GZV8 571 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 TMEM140Q9NV12 185 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 RNF24Q9Y225 148 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 IGHV3-72A0A0B4J1Y9 119 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 LY6G6EA0A0G2JKS1 128 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 AHRRA9YTQ3 701 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 DIRC3C9JPN6 131 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 J3QR06 171 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 PSPNO60542 156 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 WNT2P09544 360 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 SSTR5P35346 364 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 RAB7AP51149 207 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 RPL31P62899 125 aaKnown RBP5.8□□□□□ -1.48
NEDD9-216ENST00000620854 MAJINQ3KP22 176 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 TEPPQ6URK8 271 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 FAM214BQ7L5A3 538 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 DOLPP1Q86YN1 238 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 TIMD4Q96H15 378 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 NDFIP1Q9BT67 221 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 QTRT1Q9BXR0 403 aaKnown RBP5.8□□□□□ -1.48
NEDD9-216ENST00000620854 TP53TG3Q9ULZ0 132 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 SELENOKQ9Y6D0 94 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 U3KQA8 63 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 YLPM1P49750 1951 aaKnown RBP5.8□□□□□ -1.48
NEDD9-216ENST00000620854 hADV38S2A0JD32 116 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 FBLL1A6NHQ2 334 aaKnown RBP5.8□□□□□ -1.48
NEDD9-216ENST00000620854 C10orf142B7Z368 130 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 FOXH1O75593 365 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 S100A4P26447 101 aaKnown RBP5.8□□□□□ -1.48
NEDD9-216ENST00000620854 COL8A1P27658 744 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 SPATA31B1PQ5VZV4 182 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 TMEM108Q6UXF1 575 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 PDPNQ86YL7 162 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 MUC15Q8N387 334 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 ZNF703Q9H7S9 590 aaPredicted RBP5.8□□□□□ -1.48
NEDD9-216ENST00000620854 TMEM167BQ9NRX6 74 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 TANC2Q9HCD6 1990 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 ZNF785A8K8V0 405 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 RRHO14718 337 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 CA1P00915 261 aaPredicted RBP5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM87AP0C7U9 286 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 TPTE2P1Q5T6R2 138 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 LCN12Q6JVE5 192 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 SPSB4Q96A44 273 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 ONECUT1Q9UBC0 465 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 TACC2O95359 2948 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 IGKV3-7A0A075B6H7 116 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 KIR2DL5BA0A0G2JN68 375 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 KIR2DL5BA0A0G2JPC4 375 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 H3BTX0 84 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 CELA3BP08861 270 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 TIMP3P35625 211 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 LCN2P80188 198 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 KHDC1LQ5JSQ8 128 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM162BQ5T6X4 162 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 WDR73Q6P4I2 378 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 VWA1Q6PCB0 445 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 KIR2DL5AQ8N109 375 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 COL25A1Q9BXS0 654 aaPredicted RBP5.79□□□□□ -1.48
NEDD9-216ENST00000620854 RNASE7Q9H1E1 156 aaKnown RBP5.79□□□□□ -1.48
NEDD9-216ENST00000620854 SEPSECSQ9HD40 501 aaKnown RBP5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FBXL7Q9UJT9 491 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM90A10PA6NDY2 464 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM90A18PA6NE21 464 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM90A16PA6NEW6 464 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM90A20PA6NIJ5 464 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM90A8PA6NJQ4 464 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM90A7PA6NKC0 464 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 LINC00473A8K010 186 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM90A22PA8MWA6 464 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM90A12PA8MX19 464 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM90A5PA8MXJ8 464 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM90A23PA8MXZ1 464 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 C12orf77C9JDV5 145 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 J3KRW8 73 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 PDE6DO43924 150 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 TNFSF13O75888 250 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM90A15PP0C7V4 464 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM90A13PP0C7W8 464 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM90A14PP0C7W9 464 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 FAM90A24PP0C7X0 464 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 RPL24P83731 157 aaKnown RBP5.79□□□□□ -1.48
NEDD9-216ENST00000620854 SPATA45Q537H7 98 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 Q6ZS49 121 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 STPG4Q8N801 248 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 AAMDCQ9H7C9 122 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 HSPB7Q9UBY9 170 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 TBL2Q9Y4P3 447 aaKnown RBP5.79□□□□□ -1.48
NEDD9-216ENST00000620854 ADGRG4Q8IZF6 3080 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 KALRNO60229 2985 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 VENTXO95231 258 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 CXorf1O96002 111 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 GATA2P23769 480 aaPredicted RBP5.79□□□□□ -1.48
NEDD9-216ENST00000620854 PRDX2P32119 198 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 LINC00310P59036 64 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms