RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 SIGLEC8Q9NYZ4 499 aa12.94□□□□□ -0.34
LHX1-202ENST00000616237 C14orf166Q9Y224 244 aaKnown RBP12.94□□□□□ -0.34
LHX1-202ENST00000616237 HUWE1Q7Z6Z7 4374 aaKnown RBP12.93□□□□□ -0.34
LHX1-202ENST00000616237 TRBV7-1A0A0A6YYK4 115 aa12.93□□□□□ -0.34
LHX1-202ENST00000616237 CDS2O95674 445 aa12.93□□□□□ -0.34
LHX1-202ENST00000616237 S100A5P33763 92 aa12.93□□□□□ -0.34
LHX1-202ENST00000616237 ARL3P36405 182 aa12.93□□□□□ -0.34
LHX1-202ENST00000616237 MECP2P51608 486 aaKnown RBP12.93□□□□□ -0.34
LHX1-202ENST00000616237 HSPE1P61604 102 aaKnown RBP12.93□□□□□ -0.34
LHX1-202ENST00000616237 PRCDQ00LT1 54 aa12.93□□□□□ -0.34
LHX1-202ENST00000616237 TRIM16LQ309B1 348 aa12.93□□□□□ -0.34
LHX1-202ENST00000616237 Q6ZRM9 215 aa12.93□□□□□ -0.34
LHX1-202ENST00000616237 Q8N402 240 aa12.93□□□□□ -0.34
LHX1-202ENST00000616237 OR2C3Q8N628 320 aa12.93□□□□□ -0.34
LHX1-202ENST00000616237 TMEM56Q96MV1 263 aa12.93□□□□□ -0.34
LHX1-202ENST00000616237 TMEM222Q9H0R3 208 aa12.93□□□□□ -0.34
LHX1-202ENST00000616237 ZC4H2Q9NQZ6 224 aa12.93□□□□□ -0.34
LHX1-202ENST00000616237 IGHV3-21A0A0B4J1V1 117 aa12.92□□□□□ -0.34
LHX1-202ENST00000616237 TEX13DA0A0J9YY54 714 aaPredicted RBP12.92□□□□□ -0.34
LHX1-202ENST00000616237 CRYM-AS1A6NIL9 109 aa12.92□□□□□ -0.34
LHX1-202ENST00000616237 F8W735 103 aaPredicted RBP12.92□□□□□ -0.34
LHX1-202ENST00000616237 K7EIM0 57 aa12.92□□□□□ -0.34
LHX1-202ENST00000616237 GPR183P32249 361 aa12.92□□□□□ -0.34
LHX1-202ENST00000616237 ETV6P41212 452 aa12.92□□□□□ -0.34
LHX1-202ENST00000616237 AKR1C2P52895 323 aa12.92□□□□□ -0.34
LHX1-202ENST00000616237 SPINK9Q5DT21 86 aa12.92□□□□□ -0.34
LHX1-202ENST00000616237 GPHB5Q86YW7 130 aa12.92□□□□□ -0.34
LHX1-202ENST00000616237 VN1R17PQ8TDU5 208 aa12.92□□□□□ -0.34
LHX1-202ENST00000616237 MCUBQ9NWR8 336 aa12.92□□□□□ -0.34
LHX1-202ENST00000616237 THYN1Q9P016 225 aa12.92□□□□□ -0.34
LHX1-202ENST00000616237 PEMTQ9UBM1 199 aa12.92□□□□□ -0.34
LHX1-202ENST00000616237 IZUMO1RA6ND01 250 aa12.91□□□□□ -0.34
LHX1-202ENST00000616237 LGALS9O00182 355 aa12.91□□□□□ -0.34
LHX1-202ENST00000616237 ST8SIA3O43173 380 aa12.91□□□□□ -0.34
LHX1-202ENST00000616237 B3GALNT1O75752 331 aa12.91□□□□□ -0.34
LHX1-202ENST00000616237 CD69Q07108 199 aa12.91□□□□□ -0.34
LHX1-202ENST00000616237 DCTN2Q13561 401 aaKnown RBP12.91□□□□□ -0.34
LHX1-202ENST00000616237 C11orf87Q6NUJ2 197 aa12.91□□□□□ -0.34
LHX1-202ENST00000616237 SELENOHQ8IZQ5 122 aaKnown RBP12.91□□□□□ -0.34
LHX1-202ENST00000616237 SCARB1Q8WTV0 552 aa12.91□□□□□ -0.34
LHX1-202ENST00000616237 PRR13Q9NZ81 148 aa12.91□□□□□ -0.34
LHX1-202ENST00000616237 SCP2D1Q9UJQ7 156 aa12.91□□□□□ -0.34
LHX1-202ENST00000616237 C2orf70A6NJV1 201 aa12.9□□□□□ -0.34
LHX1-202ENST00000616237 UNQ9165/PRO28630Q6UXU0 137 aa12.9□□□□□ -0.34
LHX1-202ENST00000616237 Q8N1Y9 231 aa12.9□□□□□ -0.34
LHX1-202ENST00000616237 ZNF114Q8NC26 417 aa12.9□□□□□ -0.34
LHX1-202ENST00000616237 OR1P1Q8NH06 330 aa12.9□□□□□ -0.34
LHX1-202ENST00000616237 SRRQ9GZT4 340 aa12.9□□□□□ -0.34
LHX1-202ENST00000616237 IGHV3-35A0A0C4DH35 117 aa12.89□□□□□ -0.35
LHX1-202ENST00000616237 TMEM213A2RRL7 107 aa12.89□□□□□ -0.35
LHX1-202ENST00000616237 CYB5BO43169 146 aa12.89□□□□□ -0.35
LHX1-202ENST00000616237 SUPT4H1P63272 117 aaKnown RBP12.89□□□□□ -0.35
LHX1-202ENST00000616237 TOMM5Q8N4H5 51 aa12.89□□□□□ -0.35
LHX1-202ENST00000616237 CACNG8Q8WXS5 425 aa12.89□□□□□ -0.35
LHX1-202ENST00000616237 ZNF414Q96IQ9 312 aa12.89□□□□□ -0.35
LHX1-202ENST00000616237 PLEKHA3Q9HB20 300 aa12.89□□□□□ -0.35
LHX1-202ENST00000616237 SMAD5-AS1Q9Y6J3 95 aa12.89□□□□□ -0.35
LHX1-202ENST00000616237 I3L2K1 104 aa12.88□□□□□ -0.35
LHX1-202ENST00000616237 TGOLN2O43493 480 aa12.88□□□□□ -0.35
LHX1-202ENST00000616237 ATG12O94817 140 aa12.88□□□□□ -0.35
LHX1-202ENST00000616237 FOLR2P14207 255 aa12.88□□□□□ -0.35
LHX1-202ENST00000616237 DHODHQ02127 395 aa12.88□□□□□ -0.35
LHX1-202ENST00000616237 TMEM187Q14656 261 aa12.88□□□□□ -0.35
LHX1-202ENST00000616237 TMEM268Q5VZI3 342 aa12.88□□□□□ -0.35
LHX1-202ENST00000616237 PLET1Q6UQ28 207 aa12.88□□□□□ -0.35
LHX1-202ENST00000616237 OR1L6Q8NGR2 347 aa12.88□□□□□ -0.35
LHX1-202ENST00000616237 RBPMSQ93062 196 aaKnown RBP12.88□□□□□ -0.35
LHX1-202ENST00000616237 GPR146Q96CH1 333 aa12.88□□□□□ -0.35
LHX1-202ENST00000616237 RRNAD1Q96FB5 475 aaKnown RBP12.88□□□□□ -0.35
LHX1-202ENST00000616237 GALNT14Q96FL9 552 aa12.88□□□□□ -0.35
LHX1-202ENST00000616237 C21orf62Q9NYP8 219 aa12.88□□□□□ -0.35
LHX1-202ENST00000616237 TMEM56-RWDD3S4R434 201 aa12.88□□□□□ -0.35
LHX1-202ENST00000616237 ZNF320A2RRD8 509 aa12.87□□□□□ -0.35
LHX1-202ENST00000616237 OR2T8A6NH00 312 aa12.87□□□□□ -0.35
LHX1-202ENST00000616237 A8MWP6 167 aa12.87□□□□□ -0.35
LHX1-202ENST00000616237 INS-IGF2F8WCM5 200 aa12.87□□□□□ -0.35
LHX1-202ENST00000616237 ADMP35318 185 aa12.87□□□□□ -0.35
LHX1-202ENST00000616237 BAK1Q16611 211 aa12.87□□□□□ -0.35
LHX1-202ENST00000616237 DEFB114Q30KQ6 69 aa12.87□□□□□ -0.35
LHX1-202ENST00000616237 CD300EQ496F6 205 aaPredicted RBP12.87□□□□□ -0.35
LHX1-202ENST00000616237 AARDQ4LEZ3 155 aa12.87□□□□□ -0.35
LHX1-202ENST00000616237 SPANXN2Q5MJ10 180 aa12.87□□□□□ -0.35
LHX1-202ENST00000616237 SCGB3A2Q96PL1 93 aa12.87□□□□□ -0.35
LHX1-202ENST00000616237 SDHCQ99643 169 aaPredicted RBP12.87□□□□□ -0.35
LHX1-202ENST00000616237 ASCL2Q99929 193 aa12.87□□□□□ -0.35
LHX1-202ENST00000616237 CHRDL1Q9BU40 450 aa12.87□□□□□ -0.35
LHX1-202ENST00000616237 ZNF436Q9C0F3 470 aaPredicted RBP12.87□□□□□ -0.35
LHX1-202ENST00000616237 SELENOKQ9Y6D0 94 aa12.87□□□□□ -0.35
LHX1-202ENST00000616237 IFNA17P01571 189 aa12.86□□□□□ -0.35
LHX1-202ENST00000616237 AKR1C4P17516 323 aa12.86□□□□□ -0.35
LHX1-202ENST00000616237 CBLN1P23435 193 aa12.86□□□□□ -0.35
LHX1-202ENST00000616237 FAUP35544 74 aaKnown RBP12.86□□□□□ -0.35
LHX1-202ENST00000616237 AP3S2P59780 193 aa12.86□□□□□ -0.35
LHX1-202ENST00000616237 ERHP84090 104 aaKnown RBP12.86□□□□□ -0.35
LHX1-202ENST00000616237 FAM106AQ4KMX7 169 aa12.86□□□□□ -0.35
LHX1-202ENST00000616237 TM4SF20Q53R12 229 aa12.86□□□□□ -0.35
LHX1-202ENST00000616237 PVRIGQ6DKI7 326 aa12.86□□□□□ -0.35
LHX1-202ENST00000616237 FAM219AQ8IW50 185 aa12.86□□□□□ -0.35
LHX1-202ENST00000616237 SGPP2Q8IWX5 399 aa12.86□□□□□ -0.35
LHX1-202ENST00000616237 RNASE11Q8TAA1 199 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms