RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 OR9G4Q8NGQ1 327 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 MISP3Q96FF7 219 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 COPZ2Q9P299 210 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 IGKV3-7A0A075B6H7 116 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 NPIPB5A8MRT5 1133 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 CTDSPLO15194 276 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 GSTZ1O43708 216 aaPredicted RBP4.31□□□□□ -1.72
CPNE3-208ENST00000614678 SCAF4O95104 1147 aaKnown RBP4.31□□□□□ -1.72
CPNE3-208ENST00000614678 AKR1C2P52895 323 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 IFITM3Q01628 133 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 H2BFWTQ7Z2G1 175 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 RANGRFQ9HD47 186 aaPredicted RBP4.31□□□□□ -1.72
CPNE3-208ENST00000614678 MLXQ9UH92 298 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.31□□□□□ -1.72
CPNE3-208ENST00000614678 TEX13DA0A0J9YY54 714 aaPredicted RBP4.31□□□□□ -1.72
CPNE3-208ENST00000614678 TMEM213A2RRL7 107 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 PLA2G10O15496 165 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 TCTEX1D1Q8N7M0 179 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 GDPD1Q8N9F7 314 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 NECAP1Q8NC96 275 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 ZNF502Q8TBZ5 544 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 PPP1R14BQ96C90 147 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 RETNQ9HD89 108 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 CACNG5Q9UF02 275 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 CRYM-AS1A6NIL9 109 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 H0Y980 276 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 ADAP1O75689 374 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 CTSDP07339 412 aaPredicted RBP4.3□□□□□ -1.72
CPNE3-208ENST00000614678 TRAPPC2P0DI81 140 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 TRAPPC2BP0DI82 140 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 ANXA7P20073 488 aaKnown RBP4.3□□□□□ -1.72
CPNE3-208ENST00000614678 UCP1P25874 307 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 ARL3P36405 182 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 MECP2P51608 486 aaKnown RBP4.3□□□□□ -1.72
CPNE3-208ENST00000614678 CTAG1AP78358 180 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 PPP1R1AQ13522 171 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 TMEM187Q14656 261 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 ZNF57Q68EA5 555 aaPredicted RBP4.3□□□□□ -1.72
CPNE3-208ENST00000614678 TOMM5Q8N4H5 51 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 VSTM2AQ8TAG5 236 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 TMEM222Q9H0R3 208 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 NAA60Q9H7X0 242 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 CDS2O95674 445 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 KIR2DS2P43631 304 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 ERVK-16P61578 105 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 PLEKHA3Q9HB20 300 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 F11RQ9Y624 299 aaKnown RBP4.3□□□□□ -1.72
CPNE3-208ENST00000614678 I3L2K1 104 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 IGLV1-51P01701 117 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 FOLR2P14207 255 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 GP9P14770 177 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 CD40LGP29965 261 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 C9orf66Q5T8R8 295 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 BTNL8Q6UX41 500 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 IQCF2Q8IXL9 164 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 OR1L8Q8NGR8 309 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 OR4A16Q8NH70 328 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 BCL7BQ9BQE9 202 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 MAGT1Q9H0U3 335 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 COMMD9Q9P000 198 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 ZNF256Q9Y2P7 627 aaPredicted RBP4.3□□□□□ -1.72
CPNE3-208ENST00000614678 ZNF257Q9Y2Q1 563 aa4.3□□□□□ -1.72
CPNE3-208ENST00000614678 C2orf70A6NJV1 201 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 ZNF785A8K8V0 405 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 MT-CO2P00403 227 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 IFNA17P01571 189 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 CTSGP08311 255 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 VAMP1P23763 118 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 RND3P61587 244 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 MSMO1Q15800 293 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 TMEM61Q8N0U2 210 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 CITED4Q96RK1 184 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 FRMD6-AS1P0C7T7 363 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 IL7P13232 177 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 PRCDQ00LT1 54 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 CD300LFQ8TDQ1 290 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 ZNF486Q96H40 463 aaPredicted RBP4.29□□□□□ -1.72
CPNE3-208ENST00000614678 C20orf24Q9BUV8 137 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 PLECQ15149 4684 aaKnown RBP4.29□□□□□ -1.72
CPNE3-208ENST00000614678 A0A0G2JLM5 398 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 DISC1C4P0D8 188 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 SNAPC5O75971 98 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 S100A5P33763 92 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 Q6ZNX1 250 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 OR2C3Q8N628 320 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 DEFB125Q8N687 156 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 UXS1Q8NBZ7 420 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 LSM10Q969L4 123 aaKnown RBP4.29□□□□□ -1.72
CPNE3-208ENST00000614678 FAM110AQ9BQ89 295 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 BOLA2-SMG1P6H3BVE0 249 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 HOXB5P09067 269 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 IGHV4-30-4P0DP06 118 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 RNASE2P10153 161 aaKnown RBP4.29□□□□□ -1.72
CPNE3-208ENST00000614678 CBLN1P23435 193 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 PTBP1P26599 531 aaKnown RBP eCLIP4.29□□□□□ -1.72
CPNE3-208ENST00000614678 HSPE1P61604 102 aaKnown RBP4.29□□□□□ -1.72
CPNE3-208ENST00000614678 ANAPC16Q96DE5 110 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 USMG5Q96IX5 58 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 OR4C12Q96R67 309 aa4.29□□□□□ -1.72
CPNE3-208ENST00000614678 UBQLN2Q9UHD9 624 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms