RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 FRMPD3Q5JV73 1810 aa12.33□□□□□ -0.43
SNPH-203ENST00000614659 GRIFINA4D1Z8 144 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 CKS2P33552 79 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 CYB5R2Q6BCY4 276 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 CENPWQ5EE01 88 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 TMEM70Q9BUB7 260 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 PLXNA2O75051 1894 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 TRAV1-1A0A0B4J248 108 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 IGKV1D-13A0A0B4J2D9 117 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 ETV2O00321 342 aaPredicted RBP12.33□□□□□ -0.44
SNPH-203ENST00000614659 IGKV1-13P0DP09 117 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 OR52E5Q8NH55 327 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 HIST1H4GQ99525 98 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 CYTL1Q9NRR1 136 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 LINC00587B1AMM8 73 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 HOXA5P20719 270 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 TMEM177Q53S58 311 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 OR10J6PQ8NGY7 276 aa12.33□□□□□ -0.44
SNPH-203ENST00000614659 TFF3Q07654 80 aa12.32□□□□□ -0.44
SNPH-203ENST00000614659 FXYD3Q14802 87 aa12.32□□□□□ -0.44
SNPH-203ENST00000614659 OR10AG1Q8NH19 301 aa12.32□□□□□ -0.44
SNPH-203ENST00000614659 PGLYRP4Q96LB8 373 aa12.32□□□□□ -0.44
SNPH-203ENST00000614659 TANC1Q9C0D5 1861 aa12.32□□□□□ -0.44
SNPH-203ENST00000614659 TMEM242Q9NWH2 141 aa12.32□□□□□ -0.44
SNPH-203ENST00000614659 TDRD6O60522 2096 aaKnown RBP12.32□□□□□ -0.44
SNPH-203ENST00000614659 A0A1B0GW15 77 aa12.32□□□□□ -0.44
SNPH-203ENST00000614659 SLC25A16P16260 332 aa12.32□□□□□ -0.44
SNPH-203ENST00000614659 IGHG3P01860 377 aa12.32□□□□□ -0.44
SNPH-203ENST00000614659 ZNRF1Q8ND25 227 aa12.32□□□□□ -0.44
SNPH-203ENST00000614659 IGHV3-21A0A0B4J1V1 117 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 A0A1B0GV72 72 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 J3KRW8 73 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 ATRAIDQ6UW56 229 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 MAP1LC3AQ9H492 121 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 PROB1E7EW31 1015 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 TSPOP30536 169 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 OTX1P32242 354 aaPredicted RBP12.31□□□□□ -0.44
SNPH-203ENST00000614659 VKORC1L1Q8N0U8 176 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 C15orf61A6NNL5 157 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 SUPT4H1P63272 117 aaKnown RBP12.31□□□□□ -0.44
SNPH-203ENST00000614659 TTC32Q5I0X7 151 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 NPIPB3Q92617 1050 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 IMMP2LQ96T52 175 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 THADAQ6YHU6 1953 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 MBD3L4A6NDZ8 208 aaPredicted RBP12.31□□□□□ -0.44
SNPH-203ENST00000614659 MBD3L3A6NE82 208 aaPredicted RBP12.31□□□□□ -0.44
SNPH-203ENST00000614659 DPRXA6NFQ7 191 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 MBD3L5A6NJ08 208 aaPredicted RBP12.31□□□□□ -0.44
SNPH-203ENST00000614659 SAPCD1Q5SSQ6 148 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 SAMD13Q5VXD3 122 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 DMRTA1Q5VZB9 504 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 MBD3L2Q8NHZ7 208 aaPredicted RBP12.31□□□□□ -0.44
SNPH-203ENST00000614659 FMC1Q96HJ9 113 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 REG4Q9BYZ8 158 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 PRSS22Q9GZN4 317 aa12.31□□□□□ -0.44
SNPH-203ENST00000614659 IGHV3-72A0A0B4J1Y9 119 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 CDKN1AP38936 164 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 HBBP68871 147 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 MBNL2Q5VZF2 373 aaKnown RBP12.3□□□□□ -0.44
SNPH-203ENST00000614659 WDR82Q6UXN9 313 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 ASCL4Q6XD76 172 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 TMEM144Q7Z5S9 345 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 LEAP2Q969E1 77 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 APELAP0DMC3 54 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 RRN3P1Q2M238 152 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 IGFL3Q6UXB1 125 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 IGKV1-12A0A0C4DH73 117 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 UPK2O00526 184 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 IGKV1D-12P01611 117 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 HERPUD1Q15011 391 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 ATOH7Q8N100 152 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 IGKV1D-8A0A087WSZ0 117 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 KIAA1644Q3SXP7 199 aa12.3□□□□□ -0.44
SNPH-203ENST00000614659 WFDC3Q8IUB2 231 aa12.29□□□□□ -0.44
SNPH-203ENST00000614659 WFDC1Q9HC57 220 aa12.29□□□□□ -0.44
SNPH-203ENST00000614659 LINC00305Q7Z4B0 112 aa12.29□□□□□ -0.44
SNPH-203ENST00000614659 PIP4P1Q86T03 277 aa12.29□□□□□ -0.44
SNPH-203ENST00000614659 NAPSAO96009 420 aa12.29□□□□□ -0.44
SNPH-203ENST00000614659 SMIM13P0DJ93 91 aa12.29□□□□□ -0.44
SNPH-203ENST00000614659 ADIPOQQ15848 244 aa12.29□□□□□ -0.44
SNPH-203ENST00000614659 TM4SF20Q53R12 229 aa12.29□□□□□ -0.44
SNPH-203ENST00000614659 AMMECR1LQ6DCA0 310 aa12.29□□□□□ -0.44
SNPH-203ENST00000614659 C16orf92Q96LL3 132 aa12.29□□□□□ -0.44
SNPH-203ENST00000614659 MORN2Q502X0 79 aa12.29□□□□□ -0.44
SNPH-203ENST00000614659 Q6AWC8 147 aa12.29□□□□□ -0.44
SNPH-203ENST00000614659 ZDBF2Q9HCK1 2354 aa12.28□□□□□ -0.44
SNPH-203ENST00000614659 FCGR2BP31994 310 aaPredicted RBP12.28□□□□□ -0.44
SNPH-203ENST00000614659 PSMG4Q5JS54 123 aa12.28□□□□□ -0.44
SNPH-203ENST00000614659 SYT8Q8NBV8 401 aa12.28□□□□□ -0.44
SNPH-203ENST00000614659 PEMTQ9UBM1 199 aa12.28□□□□□ -0.44
SNPH-203ENST00000614659 PINLYPA6NC86 204 aa12.28□□□□□ -0.44
SNPH-203ENST00000614659 ZNF324O75467 553 aaPredicted RBP12.28□□□□□ -0.44
SNPH-203ENST00000614659 IGFBP2P18065 325 aa12.28□□□□□ -0.44
SNPH-203ENST00000614659 CBLN1P23435 193 aa12.28□□□□□ -0.44
SNPH-203ENST00000614659 RPL23P62829 140 aaKnown RBP12.28□□□□□ -0.44
SNPH-203ENST00000614659 ZNF124Q15973 351 aa12.28□□□□□ -0.44
SNPH-203ENST00000614659 ANAPC10Q9UM13 185 aa12.28□□□□□ -0.44
SNPH-203ENST00000614659 CELA3BP08861 270 aa12.28□□□□□ -0.44
SNPH-203ENST00000614659 C1QL4Q86Z23 238 aa12.28□□□□□ -0.44
SNPH-203ENST00000614659 F11RQ9Y624 299 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms