RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 NDUFB3O43676 98 aa10.38□□□□□ -0.75
MSH6-213ENST00000614496 PRB4P10163 310 aaPredicted RBP10.38□□□□□ -0.75
MSH6-213ENST00000614496 TNFRSF1AP19438 455 aa10.38□□□□□ -0.75
MSH6-213ENST00000614496 NPPCP23582 126 aa10.38□□□□□ -0.75
MSH6-213ENST00000614496 DAZAP2Q15038 168 aaPredicted RBP10.38□□□□□ -0.75
MSH6-213ENST00000614496 ARFGEF3Q5TH69 2177 aa10.38□□□□□ -0.75
MSH6-213ENST00000614496 DMRTC2Q8IXT2 367 aaPredicted RBP10.38□□□□□ -0.75
MSH6-213ENST00000614496 GFRA3O60609 400 aa10.38□□□□□ -0.75
MSH6-213ENST00000614496 RBP4P02753 201 aa10.38□□□□□ -0.75
MSH6-213ENST00000614496 PTTG1IPP53801 180 aa10.38□□□□□ -0.75
MSH6-213ENST00000614496 TNXAQ16473 311 aa10.38□□□□□ -0.75
MSH6-213ENST00000614496 KRTCAP3Q53RY4 240 aa10.38□□□□□ -0.75
MSH6-213ENST00000614496 GAL3ST2Q9H3Q3 398 aa10.38□□□□□ -0.75
MSH6-213ENST00000614496 AMMECR1Q9Y4X0 333 aaPredicted RBP10.38□□□□□ -0.75
MSH6-213ENST00000614496 VMA21Q3ZAQ7 101 aa10.38□□□□□ -0.75
MSH6-213ENST00000614496 MRPL37Q9BZE1 423 aaKnown RBP10.38□□□□□ -0.75
MSH6-213ENST00000614496 CD99P14209 185 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 ASPHD1Q5U4P2 390 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 Q6ZR03 302 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 OR10W1Q8NGF6 305 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 OR2T6Q8NHC8 308 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 SAP30LQ9HAJ7 183 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 IDI2-AS1Q9NZ38 188 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 TRAV5A0A0B4J249 113 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 SERTM2A0A1B0GWG4 89 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 GPR6P46095 362 aaPredicted RBP10.37□□□□□ -0.75
MSH6-213ENST00000614496 NUTF2P61970 127 aaKnown RBP10.37□□□□□ -0.75
MSH6-213ENST00000614496 FOXL1Q12952 345 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 HES1Q14469 280 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 PARD6GQ9BYG4 376 aaPredicted RBP10.37□□□□□ -0.75
MSH6-213ENST00000614496 ZNRD1Q9P1U0 126 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 SLC25A10Q9UBX3 287 aaPredicted RBP10.37□□□□□ -0.75
MSH6-213ENST00000614496 LAMA1P25391 3075 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 IGHV1-18A0A0C4DH31 117 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 SS18L1O75177 396 aaPredicted RBP10.37□□□□□ -0.75
MSH6-213ENST00000614496 MT-ND6P03923 174 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 COX7A1P24310 79 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 FOXA3P55318 350 aaPredicted RBP10.37□□□□□ -0.75
MSH6-213ENST00000614496 LYZP61626 148 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 RPL8P62917 257 aaKnown RBP10.37□□□□□ -0.75
MSH6-213ENST00000614496 COL5A1-AS1Q5SY13 56 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 GCSAMQ8N6F7 178 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 MDS2Q8NDY4 140 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 OR1L4Q8NGR5 311 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 C2orf88Q9BSF0 95 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 SNHG12Q9BXW3 62 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 DNAJC4Q9NNZ3 241 aa10.37□□□□□ -0.75
MSH6-213ENST00000614496 C15orf61A6NNL5 157 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 M0R296 226 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 SLC25A17O43808 307 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 YPEL1O60688 119 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 KIR2DL2P43627 348 aaPredicted RBP10.36□□□□□ -0.75
MSH6-213ENST00000614496 RELBQ01201 579 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 PRB3Q04118 309 aaPredicted RBP10.36□□□□□ -0.75
MSH6-213ENST00000614496 LRRC10Q5BKY1 277 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 PEAR1Q5VY43 1037 aaPredicted RBP10.36□□□□□ -0.75
MSH6-213ENST00000614496 WDR31Q8NA23 367 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 YPEL2Q96QA6 119 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 GP6Q9HCN6 339 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 NRN1Q9NPD7 142 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 POLR3KQ9Y2Y1 108 aaPredicted RBP10.36□□□□□ -0.75
MSH6-213ENST00000614496 SPTAN1Q13813 2472 aaKnown RBP10.36□□□□□ -0.75
MSH6-213ENST00000614496 CEP192Q8TEP8 1941 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 TMEM265A0A087WTH1 108 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 PGPA6NDG6 321 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 SIAH2O43255 324 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 HLA-DQA1P01909 254 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 IGKV1D-17A0A075B6S4 117 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 MOSP00540 346 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 PYYP10082 97 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 A0A1W2PRD5 423 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 A0A1W2PRF3 423 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 A0A1W2PRM7 423 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 NUPR1O60356 82 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 C1orf194Q5T5A4 169 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 OR4B1Q8NGF8 309 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 CHRDL1Q9BU40 450 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 GNB4Q9HAV0 340 aa10.36□□□□□ -0.75
MSH6-213ENST00000614496 KBTBD11-OT1A0A1B0GTJ5 212 aa10.35□□□□□ -0.75
MSH6-213ENST00000614496 AMY1AP04745 511 aa10.35□□□□□ -0.75
MSH6-213ENST00000614496 SP9P0CG40 484 aa10.35□□□□□ -0.75
MSH6-213ENST00000614496 RNASEH2CQ8TDP1 164 aaKnown RBP10.35□□□□□ -0.75
MSH6-213ENST00000614496 SSBP4Q9BWG4 385 aaPredicted RBP10.35□□□□□ -0.75
MSH6-213ENST00000614496 PRRG2O14669 202 aa10.35□□□□□ -0.75
MSH6-213ENST00000614496 CCL3L1P16619 93 aa10.35□□□□□ -0.75
MSH6-213ENST00000614496 FAM27E3Q08E93 113 aa10.35□□□□□ -0.75
MSH6-213ENST00000614496 ARSJQ5FYB0 599 aaPredicted RBP10.35□□□□□ -0.75
MSH6-213ENST00000614496 TMEM108Q6UXF1 575 aa10.35□□□□□ -0.75
MSH6-213ENST00000614496 C5orf30Q96GV9 206 aa10.35□□□□□ -0.75
MSH6-213ENST00000614496 CDKN1AP38936 164 aa10.35□□□□□ -0.75
MSH6-213ENST00000614496 TCTAP57738 103 aa10.35□□□□□ -0.75
MSH6-213ENST00000614496 COX19Q49B96 90 aa10.35□□□□□ -0.75
MSH6-213ENST00000614496 DMRTA1Q5VZB9 504 aa10.35□□□□□ -0.75
MSH6-213ENST00000614496 BET1LQ9NYM9 111 aa10.35□□□□□ -0.75
MSH6-213ENST00000614496 DPRXA6NFQ7 191 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 P01737 135 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 LMO1P25800 156 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 BEND2Q8NDZ0 799 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 MIEN1Q9BRT3 115 aa10.34□□□□□ -0.75
MSH6-213ENST00000614496 SRRM5B3KS81 715 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms