RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 ZNF236Q9UL36 1845 aa16.88■□□□□ 0.29
CTDP1-208ENST00000613122 ZNF256Q9Y2P7 627 aaPredicted RBP16.88■□□□□ 0.29
CTDP1-208ENST00000613122 CGAP01215 116 aa16.88■□□□□ 0.29
CTDP1-208ENST00000613122 UQCRFS1P47985 274 aa16.88■□□□□ 0.29
CTDP1-208ENST00000613122 TRBV6-7A0A0A0MS04 114 aa16.87■□□□□ 0.29
CTDP1-208ENST00000613122 SMIM6P0DI80 62 aa16.87■□□□□ 0.29
CTDP1-208ENST00000613122 HBBP68871 147 aa16.87■□□□□ 0.29
CTDP1-208ENST00000613122 MORN2Q502X0 79 aa16.87■□□□□ 0.29
CTDP1-208ENST00000613122 FAM209BQ5JX69 171 aa16.87■□□□□ 0.29
CTDP1-208ENST00000613122 DNLZQ5SXM8 178 aa16.87■□□□□ 0.29
CTDP1-208ENST00000613122 LAIR2Q6ISS4 152 aa16.87■□□□□ 0.29
CTDP1-208ENST00000613122 ALKBH7Q9BT30 221 aaPredicted RBP16.87■□□□□ 0.29
CTDP1-208ENST00000613122 PIKFYVEQ9Y2I7 2098 aa16.87■□□□□ 0.29
CTDP1-208ENST00000613122 MARVELD3Q96A59 401 aa16.87■□□□□ 0.29
CTDP1-208ENST00000613122 ZNF497Q6ZNH5 498 aa16.87■□□□□ 0.29
CTDP1-208ENST00000613122 LYZL4Q96KX0 146 aa16.87■□□□□ 0.29
CTDP1-208ENST00000613122 IGFBP3P17936 291 aaPredicted RBP16.86■□□□□ 0.29
CTDP1-208ENST00000613122 ZNF385CQ66K41 422 aaPredicted RBP16.86■□□□□ 0.29
CTDP1-208ENST00000613122 TMEM167AQ8TBQ9 72 aa16.86■□□□□ 0.29
CTDP1-208ENST00000613122 TRBV9A0A0B4J1U6 114 aa16.86■□□□□ 0.29
CTDP1-208ENST00000613122 LINC00271P0C7V0 271 aa16.86■□□□□ 0.29
CTDP1-208ENST00000613122 HIST1H4GQ99525 98 aa16.86■□□□□ 0.29
CTDP1-208ENST00000613122 C7orf71A4D174 169 aa16.86■□□□□ 0.29
CTDP1-208ENST00000613122 TFF1P04155 84 aa16.86■□□□□ 0.29
CTDP1-208ENST00000613122 C17orf82Q86X59 251 aaPredicted RBP16.86■□□□□ 0.29
CTDP1-208ENST00000613122 PEX7O00628 323 aa16.86■□□□□ 0.29
CTDP1-208ENST00000613122 PMCHL1Q16048 86 aa16.86■□□□□ 0.29
CTDP1-208ENST00000613122 C11orf44Q8N8P7 122 aa16.86■□□□□ 0.29
CTDP1-208ENST00000613122 FMC1Q96HJ9 113 aa16.86■□□□□ 0.29
CTDP1-208ENST00000613122 ZNF646O15015 1829 aaPredicted RBP16.86■□□□□ 0.29
CTDP1-208ENST00000613122 TGIF2-C20orf24A0A0A6YYL0 155 aa16.85■□□□□ 0.29
CTDP1-208ENST00000613122 RHOGP84095 191 aa16.85■□□□□ 0.29
CTDP1-208ENST00000613122 FAM186AA6NE01 2351 aa16.85■□□□□ 0.29
CTDP1-208ENST00000613122 TIMM23O14925 209 aa16.85■□□□□ 0.29
CTDP1-208ENST00000613122 FHITP49789 147 aa16.85■□□□□ 0.29
CTDP1-208ENST00000613122 GTSCR1Q86UQ5 136 aa16.85■□□□□ 0.29
CTDP1-208ENST00000613122 ARL6IP6Q8N6S5 226 aa16.85■□□□□ 0.29
CTDP1-208ENST00000613122 ST6GALNAC3Q8NDV1 305 aa16.85■□□□□ 0.29
CTDP1-208ENST00000613122 LOC107984156A0A0G2JMH3 177 aa16.85■□□□□ 0.29
CTDP1-208ENST00000613122 SIGLEC5O15389 551 aa16.85■□□□□ 0.29
CTDP1-208ENST00000613122 KIAA1644Q3SXP7 199 aa16.85■□□□□ 0.29
CTDP1-208ENST00000613122 ARL17AQ8IVW1 177 aa16.85■□□□□ 0.29
CTDP1-208ENST00000613122 EGR1P18146 543 aa16.84■□□□□ 0.29
CTDP1-208ENST00000613122 LEPP41159 167 aa16.84■□□□□ 0.29
CTDP1-208ENST00000613122 PKIAP61925 76 aa16.84■□□□□ 0.29
CTDP1-208ENST00000613122 GGNQ86UU5 652 aa16.84■□□□□ 0.29
CTDP1-208ENST00000613122 MRAP2Q96G30 205 aa16.84■□□□□ 0.29
CTDP1-208ENST00000613122 RCC1LQ96I51 464 aaKnown RBP16.84■□□□□ 0.29
CTDP1-208ENST00000613122 RTBDNQ9BSG5 229 aaPredicted RBP16.84■□□□□ 0.29
CTDP1-208ENST00000613122 LTBP1Q14766 1721 aa16.84■□□□□ 0.29
CTDP1-208ENST00000613122 TRAV14DV4A0A0A6YYC5 116 aa16.84■□□□□ 0.29
CTDP1-208ENST00000613122 FOLR2P14207 255 aa16.84■□□□□ 0.29
CTDP1-208ENST00000613122 FAM166AQ6J272 317 aa16.84■□□□□ 0.29
CTDP1-208ENST00000613122 OR1P1Q8NH06 330 aa16.84■□□□□ 0.29
CTDP1-208ENST00000613122 TNFRSF14Q92956 283 aa16.84■□□□□ 0.29
CTDP1-208ENST00000613122 SLC25A28Q96A46 364 aa16.84■□□□□ 0.29
CTDP1-208ENST00000613122 CYB5R2Q6BCY4 276 aa16.84■□□□□ 0.29
CTDP1-208ENST00000613122 ERASQ7Z444 233 aa16.84■□□□□ 0.29
CTDP1-208ENST00000613122 SHISA3A0PJX4 238 aa16.83■□□□□ 0.29
CTDP1-208ENST00000613122 CCL1P22362 96 aa16.83■□□□□ 0.29
CTDP1-208ENST00000613122 SPATA45Q537H7 98 aa16.83■□□□□ 0.29
CTDP1-208ENST00000613122 PVRIGQ6DKI7 326 aa16.83■□□□□ 0.29
CTDP1-208ENST00000613122 MSRB2Q9Y3D2 182 aa16.83■□□□□ 0.29
CTDP1-208ENST00000613122 CD8AP01732 235 aa16.83■□□□□ 0.29
CTDP1-208ENST00000613122 SPTBP11277 2137 aa16.83■□□□□ 0.28
CTDP1-208ENST00000613122 TMEM250H0YL14 139 aa16.83■□□□□ 0.28
CTDP1-208ENST00000613122 FGFBP3Q8TAT2 258 aa16.83■□□□□ 0.28
CTDP1-208ENST00000613122 C15orf61A6NNL5 157 aa16.83■□□□□ 0.28
CTDP1-208ENST00000613122 REC114Q7Z4M0 266 aa16.83■□□□□ 0.28
CTDP1-208ENST00000613122 OR13C6PQ8NH95 151 aa16.83■□□□□ 0.28
CTDP1-208ENST00000613122 C2orf88Q9BSF0 95 aa16.83■□□□□ 0.28
CTDP1-208ENST00000613122 RPLP1P05386 114 aaKnown RBP16.83■□□□□ 0.28
CTDP1-208ENST00000613122 Q9H3A6 140 aa16.83■□□□□ 0.28
CTDP1-208ENST00000613122 CXorf65A6NEN9 183 aa16.82■□□□□ 0.28
CTDP1-208ENST00000613122 DUSP14O95147 198 aaKnown RBP16.82■□□□□ 0.28
CTDP1-208ENST00000613122 PUSL1Q8N0Z8 303 aaKnown RBP16.82■□□□□ 0.28
CTDP1-208ENST00000613122 OR11H4Q8NGC9 324 aa16.82■□□□□ 0.28
CTDP1-208ENST00000613122 SLC50A1Q9BRV3 221 aa16.82■□□□□ 0.28
CTDP1-208ENST00000613122 Q0VFX4 171 aa16.82■□□□□ 0.28
CTDP1-208ENST00000613122 OR9G9P0C7N8 305 aa16.82■□□□□ 0.28
CTDP1-208ENST00000613122 ZNF600Q6ZNG1 722 aa16.82■□□□□ 0.28
CTDP1-208ENST00000613122 OR10S1Q8NGN2 331 aa16.82■□□□□ 0.28
CTDP1-208ENST00000613122 A0A0G2JNJ9 132 aa16.82■□□□□ 0.28
CTDP1-208ENST00000613122 B4DSR2 109 aa16.82■□□□□ 0.28
CTDP1-208ENST00000613122 LEMD1Q68G75 181 aa16.82■□□□□ 0.28
CTDP1-208ENST00000613122 Q9UFV3 132 aa16.82■□□□□ 0.28
CTDP1-208ENST00000613122 GATA2P23769 480 aaPredicted RBP16.81■□□□□ 0.28
CTDP1-208ENST00000613122 VMO1Q7Z5L0 202 aa16.81■□□□□ 0.28
CTDP1-208ENST00000613122 NEUROG3Q9Y4Z2 214 aa16.81■□□□□ 0.28
CTDP1-208ENST00000613122 MIR17HGQ75NE6 70 aa16.81■□□□□ 0.28
CTDP1-208ENST00000613122 VENTXO95231 258 aa16.81■□□□□ 0.28
CTDP1-208ENST00000613122 CIARTQ8N365 385 aaPredicted RBP16.81■□□□□ 0.28
CTDP1-208ENST00000613122 LYPD3O95274 346 aa16.8■□□□□ 0.28
CTDP1-208ENST00000613122 OTX1P32242 354 aaPredicted RBP16.8■□□□□ 0.28
CTDP1-208ENST00000613122 JOSD1Q15040 202 aaPredicted RBP16.8■□□□□ 0.28
CTDP1-208ENST00000613122 ZNF506Q5JVG8 444 aa16.8■□□□□ 0.28
CTDP1-208ENST00000613122 PRELID3AQ96N28 172 aa16.8■□□□□ 0.28
CTDP1-208ENST00000613122 TMEM144Q7Z5S9 345 aa16.8■□□□□ 0.28
CTDP1-208ENST00000613122 GLMPQ8WWB7 406 aa16.8■□□□□ 0.28
CTDP1-208ENST00000613122 RNF125Q96EQ8 232 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms