RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 DHRS7BQ6IAN0 325 aaPredicted RBP7.06□□□□□ -1.28
SMAD4-217ENST00000611848 SPSB3Q6PJ21 355 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 TMEM14EPQ6UXP3 125 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 HAPLN4Q86UW8 402 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 THNSL2Q86YJ6 484 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 SPATA3Q8NHX4 192 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 ST6GALNAC6Q969X2 333 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 RBKSQ9H477 322 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 SMDT1Q9H4I9 107 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 RFNGQ9Y644 331 aa7.06□□□□□ -1.28
SMAD4-217ENST00000611848 IGHV1-3A0A0C4DH29 117 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 A0A1B0GUS0 222 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 A0A1W2PPI3 338 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 A6NDX4 124 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 FAM90A9PA6NNJ1 464 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 NUPL2O15504 423 aaKnown RBP7.05□□□□□ -1.28
SMAD4-217ENST00000611848 NDUFA7O95182 113 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 GPR12P47775 334 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 HBG1P69891 147 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 HBG2P69892 147 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 RUNX1Q01196 453 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 ARSJQ5FYB0 599 aaPredicted RBP7.05□□□□□ -1.28
SMAD4-217ENST00000611848 OR2B11Q5JQS5 317 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 C16orf82Q7Z2V1 217 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 LYG1Q8N1E2 194 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 OR4F5Q8NH21 305 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 PSMG3Q9BT73 122 aaPredicted RBP7.05□□□□□ -1.28
SMAD4-217ENST00000611848 PBDC1Q9BVG4 233 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 IFI27L2Q9H2X8 130 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 C1RLQ9NZP8 487 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 TRAV1-1A0A0B4J248 108 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 TSPAN9O75954 239 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 HPRT1P00492 218 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 METTL15P1P0C7V9 234 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 FAM106CPP0CH98 169 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 NPBWR1P48145 328 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 LINC00205P59089 165 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 DIAPH2-AS1Q14236 149 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 HABP2Q14520 560 aaPredicted RBP7.05□□□□□ -1.28
SMAD4-217ENST00000611848 SPANXN5Q5MJ07 72 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 FAM71F2Q6NXP2 309 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 H2BFWTQ7Z2G1 175 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 TGIF2LXQ8IUE1 241 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 CLRN3Q8NCR9 226 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 S1PR3Q99500 378 aa7.05□□□□□ -1.28
SMAD4-217ENST00000611848 MARCH11A6NNE9 402 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 PMS2P5A8MQ11 134 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 TIMM23O14925 209 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 LY86O95711 162 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 CD1BP29016 333 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 KIR2DS2P43631 304 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 REG1BP48304 166 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 PPT1P50897 306 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 CCL20P78556 96 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 SERF2P84101 59 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 ATP6V1FQ16864 119 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 PDLIM3Q53GG5 364 aaPredicted RBP7.04□□□□□ -1.28
SMAD4-217ENST00000611848 AWAT1Q58HT5 328 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 AKR1C8PQ5T2L2 129 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 C12orf54Q6X4T0 127 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 Q6ZSV7 163 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 ZNF833PQ6ZTB9 187 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 CENPVQ7Z7K6 275 aaPredicted RBP7.04□□□□□ -1.28
SMAD4-217ENST00000611848 MOB3BQ86TA1 216 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.04□□□□□ -1.28
SMAD4-217ENST00000611848 SCGB1C1Q8TD33 95 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 DDB2Q92466 427 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 CFHR4Q92496 578 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 R3HDM4Q96D70 268 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 EAF1Q96JC9 268 aaPredicted RBP7.04□□□□□ -1.28
SMAD4-217ENST00000611848 CIB3Q96Q77 187 aaPredicted RBP7.04□□□□□ -1.28
SMAD4-217ENST00000611848 OR4C12Q96R67 309 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 NPFFR1Q9GZQ6 430 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 WDR61Q9GZS3 305 aaKnown RBP7.04□□□□□ -1.28
SMAD4-217ENST00000611848 EIF5A2Q9GZV4 153 aaKnown RBP7.04□□□□□ -1.28
SMAD4-217ENST00000611848 SLC35B3Q9H1N7 401 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 KIAA1456Q9P272 454 aa7.04□□□□□ -1.28
SMAD4-217ENST00000611848 SAA2-SAA4A0A096LPE2 208 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 M0QZK8 103 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 M0R1X1 148 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 HBE1P02100 147 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 SNRNP70P08621 437 aaKnown RBP7.03□□□□□ -1.28
SMAD4-217ENST00000611848 SAA2P0DJI9 122 aaPredicted RBP7.03□□□□□ -1.28
SMAD4-217ENST00000611848 CD24P25063 80 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 SLC38A11Q08AI6 406 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 EBI3Q14213 229 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 HES1Q14469 280 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 SLC25A24Q6NUK1 477 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 TMEM219Q86XT9 240 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 OR4C13Q8NGP0 309 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 DTD1Q8TEA8 209 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 RBM14Q96PK6 669 aaKnown RBP7.03□□□□□ -1.28
SMAD4-217ENST00000611848 SLC25A33Q9BSK2 321 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 C16orf95Q9H693 158 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 FBXO7Q9Y3I1 522 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 TIMM9Q9Y5J7 89 aa7.03□□□□□ -1.28
SMAD4-217ENST00000611848 CLPSL1A2RUU4 121 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 RBFOX3A6NFN3 312 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 FCGR3BO75015 233 aa7.02□□□□□ -1.29
SMAD4-217ENST00000611848 SCAF4O95104 1147 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms