RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 SOSTQ9BQB4 213 aa10.31□□□□□ -0.76
CTSA-218ENST00000607814 RTBDNQ9BSG5 229 aaPredicted RBP10.31□□□□□ -0.76
CTSA-218ENST00000607814 NXF2Q9GZY0 626 aaKnown RBP10.31□□□□□ -0.76
CTSA-218ENST00000607814 RBM38Q9H0Z9 239 aaKnown RBP10.31□□□□□ -0.76
CTSA-218ENST00000607814 PRR13Q9NZ81 148 aa10.31□□□□□ -0.76
CTSA-218ENST00000607814 COPZ2Q9P299 210 aa10.31□□□□□ -0.76
CTSA-218ENST00000607814 ZNF320A2RRD8 509 aa10.3□□□□□ -0.76
CTSA-218ENST00000607814 C15orf61A6NNL5 157 aa10.3□□□□□ -0.76
CTSA-218ENST00000607814 DISC1C4P0D8 188 aa10.3□□□□□ -0.76
CTSA-218ENST00000607814 H0Y980 276 aa10.3□□□□□ -0.76
CTSA-218ENST00000607814 CTDSPLO15194 276 aa10.3□□□□□ -0.76
CTSA-218ENST00000607814 GGCTO75223 188 aaKnown RBP10.3□□□□□ -0.76
CTSA-218ENST00000607814 IGHV3-48P01763 117 aa10.3□□□□□ -0.76
CTSA-218ENST00000607814 AKAIN1P0CW23 69 aa10.3□□□□□ -0.76
CTSA-218ENST00000607814 TBPP20226 339 aa10.3□□□□□ -0.76
CTSA-218ENST00000607814 TRIM16LQ309B1 348 aa10.3□□□□□ -0.76
CTSA-218ENST00000607814 GDPD1Q8N9F7 314 aa10.3□□□□□ -0.76
CTSA-218ENST00000607814 OR51S1Q8NGJ8 323 aa10.3□□□□□ -0.76
CTSA-218ENST00000607814 LSM10Q969L4 123 aaKnown RBP10.3□□□□□ -0.76
CTSA-218ENST00000607814 TMEM14BQ9NUH8 114 aa10.3□□□□□ -0.76
CTSA-218ENST00000607814 MCUBQ9NWR8 336 aa10.3□□□□□ -0.76
CTSA-218ENST00000607814 PRNDQ9UKY0 176 aa10.3□□□□□ -0.76
CTSA-218ENST00000607814 IGHV3OR16-8A0A075B7F1 116 aa10.29□□□□□ -0.76
CTSA-218ENST00000607814 A0A0B4J293 547 aa10.29□□□□□ -0.76
CTSA-218ENST00000607814 A0A0G2JRQ6 117 aa10.29□□□□□ -0.76
CTSA-218ENST00000607814 OR2T8A6NH00 312 aa10.29□□□□□ -0.76
CTSA-218ENST00000607814 CTSDP07339 412 aaPredicted RBP10.29□□□□□ -0.76
CTSA-218ENST00000607814 OR5AC1P0C628 307 aa10.29□□□□□ -0.76
CTSA-218ENST00000607814 HIST1H1BP16401 226 aaKnown RBP10.29□□□□□ -0.76
CTSA-218ENST00000607814 PTBP1P26599 531 aaKnown RBP eCLIP10.29□□□□□ -0.76
CTSA-218ENST00000607814 MRPS10P82664 201 aaKnown RBP10.29□□□□□ -0.76
CTSA-218ENST00000607814 MEF2DQ14814 521 aa10.29□□□□□ -0.76
CTSA-218ENST00000607814 PYDC2Q56P42 97 aa10.29□□□□□ -0.76
CTSA-218ENST00000607814 UNQ9165/PRO28630Q6UXU0 137 aa10.29□□□□□ -0.76
CTSA-218ENST00000607814 Q8N1Y9 231 aa10.29□□□□□ -0.76
CTSA-218ENST00000607814 ZNF502Q8TBZ5 544 aa10.29□□□□□ -0.76
CTSA-218ENST00000607814 ZFAND1Q8TCF1 268 aa10.29□□□□□ -0.76
CTSA-218ENST00000607814 ZNF486Q96H40 463 aaPredicted RBP10.29□□□□□ -0.76
CTSA-218ENST00000607814 THAP7Q9BT49 309 aaPredicted RBP10.29□□□□□ -0.76
CTSA-218ENST00000607814 C5orf66Q9H5L9 145 aa10.29□□□□□ -0.76
CTSA-218ENST00000607814 RSL24D1Q9UHA3 163 aaKnown RBP10.29□□□□□ -0.76
CTSA-218ENST00000607814 TEX13DA0A0J9YY54 714 aaPredicted RBP10.28□□□□□ -0.76
CTSA-218ENST00000607814 ANKRD20A5PA0PJZ0 165 aa10.28□□□□□ -0.76
CTSA-218ENST00000607814 C2orf70A6NJV1 201 aa10.28□□□□□ -0.76
CTSA-218ENST00000607814 GSTZ1O43708 216 aaPredicted RBP10.28□□□□□ -0.76
CTSA-218ENST00000607814 AKR1C2P52895 323 aa10.28□□□□□ -0.76
CTSA-218ENST00000607814 SSBP1Q04837 148 aaKnown RBP10.28□□□□□ -0.76
CTSA-218ENST00000607814 KLK9Q2XQG4 91 aa10.28□□□□□ -0.76
CTSA-218ENST00000607814 CD300EQ496F6 205 aaPredicted RBP10.28□□□□□ -0.76
CTSA-218ENST00000607814 TM4SF20Q53R12 229 aa10.28□□□□□ -0.76
CTSA-218ENST00000607814 Q6ZRM9 215 aa10.28□□□□□ -0.76
CTSA-218ENST00000607814 UBAC2Q8NBM4 344 aa10.28□□□□□ -0.76
CTSA-218ENST00000607814 LHFPL5Q8TAF8 219 aa10.28□□□□□ -0.76
CTSA-218ENST00000607814 MISP3Q96FF7 219 aa10.28□□□□□ -0.76
CTSA-218ENST00000607814 CXorf58Q96LI9 332 aa10.28□□□□□ -0.76
CTSA-218ENST00000607814 TSC22D3Q99576 134 aa10.28□□□□□ -0.76
CTSA-218ENST00000607814 SRSF8Q9BRL6 282 aaKnown RBP10.28□□□□□ -0.76
CTSA-218ENST00000607814 PEMTQ9UBM1 199 aa10.28□□□□□ -0.76
CTSA-218ENST00000607814 KLK9Q9UKQ9 250 aa10.28□□□□□ -0.76
CTSA-218ENST00000607814 GPR132Q9UNW8 380 aa10.28□□□□□ -0.76
CTSA-218ENST00000607814 C14orf166Q9Y224 244 aaKnown RBP10.28□□□□□ -0.76
CTSA-218ENST00000607814 F11RQ9Y624 299 aaKnown RBP10.28□□□□□ -0.76
CTSA-218ENST00000607814 TRBV7-1A0A0A6YYK4 115 aa10.27□□□□□ -0.77
CTSA-218ENST00000607814 K7EIM0 57 aa10.27□□□□□ -0.77
CTSA-218ENST00000607814 FOLR2P14207 255 aa10.27□□□□□ -0.77
CTSA-218ENST00000607814 ETV6P41212 452 aa10.27□□□□□ -0.77
CTSA-218ENST00000607814 PLET1Q6UQ28 207 aa10.27□□□□□ -0.77
CTSA-218ENST00000607814 CCDC71LQ8N9Z2 235 aa10.27□□□□□ -0.77
CTSA-218ENST00000607814 OR5B3Q8NH48 314 aa10.27□□□□□ -0.77
CTSA-218ENST00000607814 SCARB1Q8WTV0 552 aa10.27□□□□□ -0.77
CTSA-218ENST00000607814 TMEM56Q96MV1 263 aa10.27□□□□□ -0.77
CTSA-218ENST00000607814 NAA60Q9H7X0 242 aa10.27□□□□□ -0.77
CTSA-218ENST00000607814 FAM212BQ9NTI7 297 aaPredicted RBP10.27□□□□□ -0.77
CTSA-218ENST00000607814 FKBP11Q9NYL4 201 aa10.27□□□□□ -0.77
CTSA-218ENST00000607814 V9GYH0 126 aa10.27□□□□□ -0.77
CTSA-218ENST00000607814 ST8SIA3O43173 380 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 NXPH3O95157 252 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 IFNA17P01571 189 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 FGF2P09038 288 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 P0C879 139 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 CBLN1P23435 193 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 UCP1P25874 307 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 HSPE1P61604 102 aaKnown RBP10.26□□□□□ -0.77
CTSA-218ENST00000607814 PRCDQ00LT1 54 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 ZNF79Q15937 498 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 HAGHQ16775 308 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 DEFB114Q30KQ6 69 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 GPHB5Q86YW7 130 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 OR2C3Q8N628 320 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 RNASE11Q8TAA1 199 aaKnown RBP10.26□□□□□ -0.77
CTSA-218ENST00000607814 DYNLRB2Q8TF09 96 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 GLYATL2Q8WU03 294 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 TMEM230Q96A57 120 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 PINX1Q96BK5 328 aaKnown RBP10.26□□□□□ -0.77
CTSA-218ENST00000607814 WDR89Q96FK6 387 aaPredicted RBP10.26□□□□□ -0.77
CTSA-218ENST00000607814 CHRDL1Q9BU40 450 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 THYN1Q9P016 225 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 RYR1P21817 5038 aa10.26□□□□□ -0.77
CTSA-218ENST00000607814 TMEM213A2RRL7 107 aa10.25□□□□□ -0.77
CTSA-218ENST00000607814 ZNF785A8K8V0 405 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms