RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 NOS1APO75052 506 aaPredicted RBP0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 SHBGP04278 402 aa0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 PRM2P04554 102 aa0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 G6PCP35575 357 aa0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 FXYD2P54710 66 aa0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 IFITM2Q01629 132 aa0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 ZNF345Q14585 488 aa0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 C10orf55Q5SWW7 151 aa0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 GLT8D1Q68CQ7 371 aa0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 DCXRQ7Z4W1 244 aa0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 SLC35B4Q969S0 331 aa0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 PARD6GQ9BYG4 376 aaPredicted RBP0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 WDR61Q9GZS3 305 aaKnown RBP0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 MED9Q9NWA0 146 aa0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 SCN3AQ9NY46 2000 aa0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 DOCK3Q8IZD9 2030 aa0.88□□□□□ -2.27
RNU6-88P-201ENST00000606801 MYH7BA7E2Y1 1941 aa0.88□□□□□ -2.27
RNU6-88P-201ENST00000606801 TRBV20OR9-2A0A075B6H5 130 aa0.88□□□□□ -2.27
RNU6-88P-201ENST00000606801 TGIF2-C20orf24A0A0A6YYL0 155 aa0.88□□□□□ -2.27
RNU6-88P-201ENST00000606801 EEF1E1-BLOC1S5C9J1V9 151 aa0.88□□□□□ -2.27
RNU6-88P-201ENST00000606801 SDCBPO00560 298 aaPredicted RBP0.88□□□□□ -2.27
RNU6-88P-201ENST00000606801 OR5G3P0C626 314 aa0.88□□□□□ -2.27
RNU6-88P-201ENST00000606801 RPS4Y1P22090 263 aaKnown RBP0.88□□□□□ -2.27
RNU6-88P-201ENST00000606801 IBA57Q5T440 356 aaKnown RBP0.88□□□□□ -2.27
RNU6-88P-201ENST00000606801 Q6ZS49 121 aa0.88□□□□□ -2.27
RNU6-88P-201ENST00000606801 DERL1Q9BUN8 251 aa0.88□□□□□ -2.27
RNU6-88P-201ENST00000606801 REG4Q9BYZ8 158 aa0.88□□□□□ -2.27
RNU6-88P-201ENST00000606801 MCM3APO60318 1980 aa0.87□□□□□ -2.27
RNU6-88P-201ENST00000606801 TMEM212A6NML5 194 aa0.87□□□□□ -2.27
RNU6-88P-201ENST00000606801 FABP5P3A8MUU1 101 aa0.87□□□□□ -2.27
RNU6-88P-201ENST00000606801 KCNK1O00180 336 aa0.87□□□□□ -2.27
RNU6-88P-201ENST00000606801 PMP2P02689 132 aa0.87□□□□□ -2.27
RNU6-88P-201ENST00000606801 CALB1P05937 261 aa0.87□□□□□ -2.27
RNU6-88P-201ENST00000606801 OR2F1Q13607 317 aa0.87□□□□□ -2.27
RNU6-88P-201ENST00000606801 ZNF846Q147U1 533 aa0.87□□□□□ -2.27
RNU6-88P-201ENST00000606801 GRK1Q15835 563 aa0.87□□□□□ -2.27
RNU6-88P-201ENST00000606801 AADACL3Q5VUY0 350 aa0.87□□□□□ -2.27
RNU6-88P-201ENST00000606801 MRPL30Q8TCC3 161 aaKnown RBP0.87□□□□□ -2.27
RNU6-88P-201ENST00000606801 TOPBP1Q92547 1522 aa0.87□□□□□ -2.27
RNU6-88P-201ENST00000606801 DENND4CQ5VZ89 1909 aa0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 DCTN3O75935 186 aa0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 IFNA5P01569 189 aa0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 UBBP0CG47 229 aa0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 HIST1H1EP10412 219 aaKnown RBP0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 NFYAP23511 347 aaPredicted RBP0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 EIF2B2P49770 351 aaKnown RBP0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 NKX2-5P52952 324 aaPredicted RBP0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 RUNX1Q01196 453 aa0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 NDUFA5Q16718 116 aa0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 C11orf40Q8WZ69 217 aa0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 YIPF3Q9GZM5 350 aa0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 GUCA1BQ9UMX6 200 aa0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 WRNQ14191 1432 aaPredicted RBP eCLIP0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 TTC21AQ8NDW8 1320 aa0.86□□□□□ -2.27
RNU6-88P-201ENST00000606801 SCN10AQ9Y5Y9 1956 aa0.85□□□□□ -2.27
RNU6-88P-201ENST00000606801 IGKV1D-42A0A075B6H8 117 aa0.85□□□□□ -2.27
RNU6-88P-201ENST00000606801 A0A1B0GV50 99 aa0.85□□□□□ -2.27
RNU6-88P-201ENST00000606801 PRB3Q04118 309 aaPredicted RBP0.85□□□□□ -2.27
RNU6-88P-201ENST00000606801 PLCXD2Q0VAA5 305 aa0.85□□□□□ -2.27
RNU6-88P-201ENST00000606801 LPCAT4Q643R3 524 aa0.85□□□□□ -2.27
RNU6-88P-201ENST00000606801 C8orf74Q6P047 294 aa0.85□□□□□ -2.27
RNU6-88P-201ENST00000606801 RPS19BP1Q86WX3 136 aaKnown RBP0.85□□□□□ -2.27
RNU6-88P-201ENST00000606801 ZNF565Q8N9K5 539 aa0.85□□□□□ -2.27
RNU6-88P-201ENST00000606801 PFN4Q8NHR9 129 aa0.85□□□□□ -2.27
RNU6-88P-201ENST00000606801 RASSF5Q8WWW0 418 aa0.85□□□□□ -2.27
RNU6-88P-201ENST00000606801 FAM96AQ9H5X1 160 aa0.85□□□□□ -2.27
RNU6-88P-201ENST00000606801 NOTCH1P46531 2555 aa0.85□□□□□ -2.27
RNU6-88P-201ENST00000606801 MTUS2Q5JR59 1369 aa0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 SBF1O95248 1867 aa0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 FBN2P35556 2912 aa0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 METTL15P1P0C7V9 234 aa0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 HIST1H2BOP23527 126 aa0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 HIST1H2BBP33778 126 aa0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 HIST1H2BDP58876 126 aa0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 MAGOHP61326 146 aaKnown RBP0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 HIST1H2BCP62807 126 aa0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 HIST2H2BEQ16778 126 aa0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 LCN15Q6UWW0 184 aa0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 OTUD6BQ8N6M0 293 aa0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 HIST1H2BHQ93079 126 aa0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 HIST1H2BNQ99877 126 aa0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 HIST1H2BMQ99879 126 aa0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 PKIGQ9Y2B9 76 aa0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 LSM5Q9Y4Y9 91 aaKnown RBP0.84□□□□□ -2.27
RNU6-88P-201ENST00000606801 FAAHO00519 579 aa0.83□□□□□ -2.28
RNU6-88P-201ENST00000606801 CTSDP07339 412 aaPredicted RBP0.83□□□□□ -2.28
RNU6-88P-201ENST00000606801 HIST1H1TP22492 207 aaPredicted RBP0.83□□□□□ -2.28
RNU6-88P-201ENST00000606801 FKBP2P26885 142 aaKnown RBP0.83□□□□□ -2.28
RNU6-88P-201ENST00000606801 SNRPD2P62316 118 aaKnown RBP0.83□□□□□ -2.28
RNU6-88P-201ENST00000606801 HIST3H3Q16695 136 aa0.83□□□□□ -2.28
RNU6-88P-201ENST00000606801 Q6ZQT0 140 aa0.83□□□□□ -2.28
RNU6-88P-201ENST00000606801 ZNF826PQ6ZT77 177 aa0.83□□□□□ -2.28
RNU6-88P-201ENST00000606801 LRRC25Q8N386 305 aaPredicted RBP0.83□□□□□ -2.28
RNU6-88P-201ENST00000606801 PPP1R2P1Q96PQ5 205 aa0.83□□□□□ -2.28
RNU6-88P-201ENST00000606801 C11orf68Q9H3H3 251 aaKnown RBP0.83□□□□□ -2.28
RNU6-88P-201ENST00000606801 FBXL12Q9NXK8 326 aa0.83□□□□□ -2.28
RNU6-88P-201ENST00000606801 NOSIPQ9Y314 301 aaKnown RBP0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms