RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PPTC7Q8NI37 304 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 DNAJA3Q96EY1 480 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 TMEM101Q96IK0 257 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 C2orf50Q96LR7 162 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 OR10A2Q9H208 303 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 PRORYQ9H606 182 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 ZNF331Q9NQX6 463 aaPredicted RBP4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 DEPPQ9NTK1 212 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 VSIG4Q9Y279 399 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 ZNF256Q9Y2P7 627 aaPredicted RBP4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 LINC00312Q9Y6C7 94 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 PHF3Q92576 2039 aaKnown RBP4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 TRAV36DV7A0A075B6V5 113 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 IGKV6D-21A0A0A0MT36 114 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 CCL15-CCL14A0A0B4J2E2 113 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 LOC102725191A0A1B0GVB3 256 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 NUDT14O95848 222 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 MOSP00540 346 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 FGF1P05230 155 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 CD55P08174 381 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 CELA2AP08217 269 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 SUB1P53999 127 aaKnown RBP eCLIP4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 CATR1Q13166 79 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 CCL15Q16663 113 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 VAX1Q5SQQ9 334 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 FAM120AOSQ5T036 256 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 PIANPQ8IYJ0 282 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 PRSS33Q8NF86 280 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 OR52E2Q8NGJ4 325 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 TMEM54Q969K7 222 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 EHFQ9NZC4 300 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 SPCS1Q9Y6A9 102 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 C15orf61A6NNL5 157 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 F8W1H4 67 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 LYPD3O95274 346 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 PRSS3P35030 304 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 DRD3P35462 400 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 FABP6P51161 128 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 TAS2R46P59540 309 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 CFHR3Q02985 330 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 CYP2G1PQ6ZSU1 146 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 Q6ZUT4 128 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 TMEM150AQ86TG1 271 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 OR5H2Q8NGV7 314 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 CARD19Q96LW7 228 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 DCTN5Q9BTE1 182 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 CXCL16Q9H2A7 254 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 PLEKHF2Q9H8W4 249 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 SPANXCQ9NY87 97 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 TAAR3PQ9P1P4 343 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 CES1P1Q9UKY3 287 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 MED31Q9Y3C7 131 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 V9GY05 133 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 A0A1B0GX51 115 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 A0A1W2PPM0 123 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 TMEM250H0YL14 139 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 CCL21O00585 134 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 RER1O15258 196 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 IGKV1D-16P01601 117 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 FGF6P10767 208 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 PSG7Q13046 419 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 LAGE3Q14657 143 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 Q75L30 129 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 LINC01465Q8N7H1 131 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 TMEM178AQ8NBL3 297 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 OR10G6Q8NH81 332 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 OR2T6Q8NHC8 308 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 ZNRF4Q8WWF5 429 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 COMMD5Q9GZQ3 224 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 OR2D2Q9H210 308 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 RNF114Q9Y508 228 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 DYSFO75923 2080 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 TRAV1-1A0A0B4J248 108 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 IGKV6-21A0A0C4DH24 114 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 DUXBA0A1W2PPF3 345 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 OTOL1A6NHN0 477 aaPredicted RBP4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 CCDC179H3BU77 68 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 J3KT08 172 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 IGLL1P15814 213 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 CRISP2P16562 243 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 IL3RAP26951 378 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 ZNF93P35789 620 aaPredicted RBP4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 LHX2P50458 406 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 DLX1P56177 255 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 CCL20P78556 96 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 POU3F1Q03052 451 aaPredicted RBP4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 SLC25A34Q6PIV7 304 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 RASL11AQ6T310 242 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 MRPL55Q7Z7F7 128 aaKnown RBP4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 OOSP2Q86WS3 158 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 SGPP2Q8IWX5 399 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 TEX29Q8N6K0 151 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 ZNF433Q8N7K0 673 aaPredicted RBP4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 DDB2Q92466 427 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 NEUROG1Q92886 237 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 GNPNAT1Q96EK6 184 aaPredicted RBP4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 WFDC6Q9BQY6 131 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 ESM1Q9NQ30 184 aa4.07□□□□□ -1.76
SPTBN1-206ENST00000602898 SMKR1H3BMG3 65 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms