RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 ATP5IP56385 69 aaPredicted RBP9.48□□□□□ -0.89
VRK3-223ENST00000601341 CTAG1AP78358 180 aa9.48□□□□□ -0.89
VRK3-223ENST00000601341 KIAA0141Q14154 515 aaPredicted RBP9.48□□□□□ -0.89
VRK3-223ENST00000601341 TMEM241Q24JQ0 296 aa9.48□□□□□ -0.89
VRK3-223ENST00000601341 OR2B11Q5JQS5 317 aa9.48□□□□□ -0.89
VRK3-223ENST00000601341 FFAR4Q5NUL3 377 aa9.48□□□□□ -0.89
VRK3-223ENST00000601341 Q8N7P7 452 aa9.48□□□□□ -0.89
VRK3-223ENST00000601341 OR10X1Q8NGY0 326 aa9.48□□□□□ -0.89
VRK3-223ENST00000601341 OR4A16Q8NH70 328 aa9.48□□□□□ -0.89
VRK3-223ENST00000601341 S1PR3Q99500 378 aa9.48□□□□□ -0.89
VRK3-223ENST00000601341 SMIM7Q9BQ49 75 aa9.48□□□□□ -0.89
VRK3-223ENST00000601341 ANKRD17O75179 2603 aaKnown RBP9.48□□□□□ -0.89
VRK3-223ENST00000601341 ELOA3CA0A087WX78 387 aaPredicted RBP9.47□□□□□ -0.89
VRK3-223ENST00000601341 SAA2-SAA4A0A096LPE2 208 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 IGHV2-26A0A0B4J1V2 119 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 M0R1X1 148 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 PDE6DO43924 150 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 SAA2P0DJI9 122 aaPredicted RBP9.47□□□□□ -0.89
VRK3-223ENST00000601341 PRTN3P24158 256 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 OPRK1P41145 380 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 VDAC2P45880 294 aaPredicted RBP9.47□□□□□ -0.89
VRK3-223ENST00000601341 THBS3P49746 956 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 PRRX1P54821 245 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 FGF8P55075 233 aaPredicted RBP9.47□□□□□ -0.89
VRK3-223ENST00000601341 RPL39P5Q59GN2 51 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 PRSS57Q6UWY2 283 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 ZDHHC16Q969W1 377 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 FAM210BQ96KR6 192 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 SSX3Q99909 188 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 CLEC7AQ9BXN2 247 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 YLPM1P49750 1951 aaKnown RBP9.47□□□□□ -0.89
VRK3-223ENST00000601341 APCP25054 2843 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 FCGR3BO75015 233 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 OR9G9P0C7N8 305 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 Q5PR19 223 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 RAB24Q969Q5 203 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 ANAPC16Q96DE5 110 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 BTF3L4Q96K17 158 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 PYGO2Q9BRQ0 406 aa9.47□□□□□ -0.89
VRK3-223ENST00000601341 QTRT1Q9BXR0 403 aaKnown RBP9.47□□□□□ -0.89
VRK3-223ENST00000601341 FOXA2Q9Y261 457 aaPredicted RBP9.47□□□□□ -0.89
VRK3-223ENST00000601341 ASH1LQ9NR48 2969 aaKnown RBP9.46□□□□□ -0.89
VRK3-223ENST00000601341 PRSS46E5RG02 174 aa9.46□□□□□ -0.9
VRK3-223ENST00000601341 CXCL1P09341 107 aa9.46□□□□□ -0.9
VRK3-223ENST00000601341 CD99P14209 185 aa9.46□□□□□ -0.9
VRK3-223ENST00000601341 IL3RAP26951 378 aa9.46□□□□□ -0.9
VRK3-223ENST00000601341 CDC34P49427 236 aaPredicted RBP9.46□□□□□ -0.9
VRK3-223ENST00000601341 B2MP61769 119 aa9.46□□□□□ -0.9
VRK3-223ENST00000601341 RELBQ01201 579 aa9.46□□□□□ -0.9
VRK3-223ENST00000601341 DNLZQ5SXM8 178 aa9.46□□□□□ -0.9
VRK3-223ENST00000601341 BEND2Q8NDZ0 799 aa9.46□□□□□ -0.9
VRK3-223ENST00000601341 TMEM186Q96B77 213 aa9.46□□□□□ -0.9
VRK3-223ENST00000601341 LPAR2Q9HBW0 351 aa9.46□□□□□ -0.9
VRK3-223ENST00000601341 ZNRD1Q9P1U0 126 aa9.46□□□□□ -0.9
VRK3-223ENST00000601341 CSMD2Q7Z408 3487 aa9.46□□□□□ -0.9
VRK3-223ENST00000601341 C15orf61A6NNL5 157 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 IGLV1-47P01700 117 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 COX7A1P24310 79 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 ZNF137PP52743 207 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 ZNF674Q2M3X9 581 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 BSXQ3C1V8 233 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 FAM71F2Q6NXP2 309 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 ZNF833PQ6ZTB9 187 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 PNKDQ8N490 385 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 OR11H6Q8NGC7 330 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 SIRPDQ9H106 197 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 SLC25A22Q9H936 323 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 TMEM14BQ9NUH8 114 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 ZNF257Q9Y2Q1 563 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 MED13LQ71F56 2210 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 UNC79Q9P2D8 2635 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 PCP4L1A6NKN8 68 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 B4DSR2 109 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 F6UZH7 168 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 CLN5O75503 358 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 HRASP01112 189 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 S100PP25815 95 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 DLX1P56177 255 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 HLA-DRB5Q30154 266 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 ZNF343Q6P1L6 599 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 C1orf229Q6ZS94 237 aaPredicted RBP9.45□□□□□ -0.9
VRK3-223ENST00000601341 VMO1Q7Z5L0 202 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 PARLQ9H300 379 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 OR51M1Q9H341 326 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 NPVFQ9HCQ7 196 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 TMEM140Q9NV12 185 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 DOK5Q9P104 306 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 AMMECR1Q9Y4X0 333 aaPredicted RBP9.45□□□□□ -0.9
VRK3-223ENST00000601341 INSIG2Q9Y5U4 225 aa9.45□□□□□ -0.9
VRK3-223ENST00000601341 A0A096LNT2 108 aa9.44□□□□□ -0.9
VRK3-223ENST00000601341 TGIF2-C20orf24A0A0A6YYL0 155 aa9.44□□□□□ -0.9
VRK3-223ENST00000601341 HIST1H2BKO60814 126 aa9.44□□□□□ -0.9
VRK3-223ENST00000601341 TOX4O94842 621 aa9.44□□□□□ -0.9
VRK3-223ENST00000601341 IFNA10P01566 189 aa9.44□□□□□ -0.9
VRK3-223ENST00000601341 HIST1H2BJP06899 126 aa9.44□□□□□ -0.9
VRK3-223ENST00000601341 PFN1P07737 140 aaKnown RBP9.44□□□□□ -0.9
VRK3-223ENST00000601341 MSMBP08118 114 aa9.44□□□□□ -0.9
VRK3-223ENST00000601341 HIST1H2BOP23527 126 aa9.44□□□□□ -0.9
VRK3-223ENST00000601341 HIST1H2BBP33778 126 aa9.44□□□□□ -0.9
VRK3-223ENST00000601341 HIST1H2BDP58876 126 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms