RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 TECRQ9NZ01 308 aaKnown RBP12.74□□□□□ -0.37
NOTCH3-205ENST00000600841 RSL24D1Q9UHA3 163 aaKnown RBP12.74□□□□□ -0.37
NOTCH3-205ENST00000600841 A8MWP6 167 aa12.73□□□□□ -0.37
NOTCH3-205ENST00000600841 A8MZ25 164 aa12.73□□□□□ -0.37
NOTCH3-205ENST00000600841 DISC1C4P0D8 188 aa12.73□□□□□ -0.37
NOTCH3-205ENST00000600841 ATG12O94817 140 aa12.73□□□□□ -0.37
NOTCH3-205ENST00000600841 CTSDP07339 412 aaPredicted RBP12.73□□□□□ -0.37
NOTCH3-205ENST00000600841 AKAIN1P0CW23 69 aa12.73□□□□□ -0.37
NOTCH3-205ENST00000600841 EDN2P20800 178 aa12.73□□□□□ -0.37
NOTCH3-205ENST00000600841 CBLN1P23435 193 aa12.73□□□□□ -0.37
NOTCH3-205ENST00000600841 MFAP2P55001 183 aa12.73□□□□□ -0.37
NOTCH3-205ENST00000600841 FAAP20Q6NZ36 180 aa12.73□□□□□ -0.37
NOTCH3-205ENST00000600841 MARCH1Q8TCQ1 289 aa12.73□□□□□ -0.37
NOTCH3-205ENST00000600841 PALMDQ9NP74 551 aa12.73□□□□□ -0.37
NOTCH3-205ENST00000600841 TMEM213A2RRL7 107 aa12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 OR2T8A6NH00 312 aa12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 TGOLN2O43493 480 aa12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 IGKV1-5P01602 117 aa12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 AKR1C2P52895 323 aa12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 HSPE1P61604 102 aaKnown RBP12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 PRCDQ00LT1 54 aa12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 TRIM16LQ309B1 348 aa12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 OR1P1Q8NH06 330 aa12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 MCFD2Q8NI22 146 aa12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 CACNG8Q8WXS5 425 aa12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 BSCL2Q96G97 398 aaPredicted RBP12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 ZMAT4Q9H898 229 aa12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 C19orf73Q9NVV2 129 aa12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 C21orf62Q9NYP8 219 aa12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 C14orf166Q9Y224 244 aaKnown RBP12.72□□□□□ -0.37
NOTCH3-205ENST00000600841 IGHV3-21A0A0B4J1V1 117 aa12.71□□□□□ -0.37
NOTCH3-205ENST00000600841 IGHV3-35A0A0C4DH35 117 aa12.71□□□□□ -0.37
NOTCH3-205ENST00000600841 GSTZ1O43708 216 aaPredicted RBP12.71□□□□□ -0.37
NOTCH3-205ENST00000600841 B3GALNT1O75752 331 aa12.71□□□□□ -0.37
NOTCH3-205ENST00000600841 GUCA2BQ16661 112 aa12.71□□□□□ -0.37
NOTCH3-205ENST00000600841 SP6Q3SY56 376 aa12.71□□□□□ -0.37
NOTCH3-205ENST00000600841 UNQ9165/PRO28630Q6UXU0 137 aa12.71□□□□□ -0.37
NOTCH3-205ENST00000600841 OR2C3Q8N628 320 aa12.71□□□□□ -0.37
NOTCH3-205ENST00000600841 OR4C16Q8NGL9 310 aa12.71□□□□□ -0.37
NOTCH3-205ENST00000600841 SCARB1Q8WTV0 552 aa12.71□□□□□ -0.37
NOTCH3-205ENST00000600841 RCHY1Q96PM5 261 aa12.71□□□□□ -0.37
NOTCH3-205ENST00000600841 ATP6V0BQ99437 205 aa12.71□□□□□ -0.37
NOTCH3-205ENST00000600841 TUBA4BQ9H853 241 aa12.71□□□□□ -0.37
NOTCH3-205ENST00000600841 PLEKHA3Q9HB20 300 aa12.71□□□□□ -0.37
NOTCH3-205ENST00000600841 SLC2A8Q9NY64 477 aa12.71□□□□□ -0.37
NOTCH3-205ENST00000600841 FABP12A6NFH5 140 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 ZNF785A8K8V0 405 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 K7EIM0 57 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 P0C879 139 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 UCP1P25874 307 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 TNFSF8P32971 234 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 CD81P60033 236 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 ERHP84090 104 aaKnown RBP12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 SURF2Q15527 256 aaPredicted RBP12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 IZUMO4Q1ZYL8 232 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 TM4SF20Q53R12 229 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 ZNF57Q68EA5 555 aaPredicted RBP12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 SPSB3Q6PJ21 355 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 UBAC2Q8NBM4 344 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 UXS1Q8NBZ7 420 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 ZNF114Q8NC26 417 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 RNASE11Q8TAA1 199 aaKnown RBP12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 MARC2Q969Z3 335 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 RRNAD1Q96FB5 475 aaKnown RBP12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 PRRT1Q99946 306 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 ZNF436Q9C0F3 470 aaPredicted RBP12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 NXF2Q9GZY0 626 aaKnown RBP12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 RBM38Q9H0Z9 239 aaKnown RBP12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 UFC1Q9Y3C8 167 aa12.7□□□□□ -0.38
NOTCH3-205ENST00000600841 A0A0B4J293 547 aa12.69□□□□□ -0.38
NOTCH3-205ENST00000600841 TEX13DA0A0J9YY54 714 aaPredicted RBP12.69□□□□□ -0.38
NOTCH3-205ENST00000600841 ANKRD20A5PA0PJZ0 165 aa12.69□□□□□ -0.38
NOTCH3-205ENST00000600841 ZNF701M0R085 212 aaPredicted RBP12.69□□□□□ -0.38
NOTCH3-205ENST00000600841 ELLP55199 621 aaPredicted RBP12.69□□□□□ -0.38
NOTCH3-205ENST00000600841 Q56UQ5 140 aa12.69□□□□□ -0.38
NOTCH3-205ENST00000600841 SLC35G3Q8N808 338 aa12.69□□□□□ -0.38
NOTCH3-205ENST00000600841 MISP3Q96FF7 219 aa12.69□□□□□ -0.38
NOTCH3-205ENST00000600841 SOSTQ9BQB4 213 aa12.69□□□□□ -0.38
NOTCH3-205ENST00000600841 NEURL2Q9BR09 285 aa12.69□□□□□ -0.38
NOTCH3-205ENST00000600841 RTBDNQ9BSG5 229 aaPredicted RBP12.69□□□□□ -0.38
NOTCH3-205ENST00000600841 GAR1Q9NY12 217 aaKnown RBP12.69□□□□□ -0.38
NOTCH3-205ENST00000600841 MLXQ9UH92 298 aa12.69□□□□□ -0.38
NOTCH3-205ENST00000600841 IFNA17P01571 189 aa12.68□□□□□ -0.38
NOTCH3-205ENST00000600841 OR5AC1P0C628 307 aa12.68□□□□□ -0.38
NOTCH3-205ENST00000600841 SPINK9Q5DT21 86 aa12.68□□□□□ -0.38
NOTCH3-205ENST00000600841 OR51S1Q8NGJ8 323 aa12.68□□□□□ -0.38
NOTCH3-205ENST00000600841 TMEM190Q8WZ59 177 aa12.68□□□□□ -0.38
NOTCH3-205ENST00000600841 WDR89Q96FK6 387 aaPredicted RBP12.68□□□□□ -0.38
NOTCH3-205ENST00000600841 CHRDL1Q9BU40 450 aa12.68□□□□□ -0.38
NOTCH3-205ENST00000600841 PDCD10Q9BUL8 212 aa12.68□□□□□ -0.38
NOTCH3-205ENST00000600841 TMEM222Q9H0R3 208 aa12.68□□□□□ -0.38
NOTCH3-205ENST00000600841 C5orf66Q9H5L9 145 aa12.68□□□□□ -0.38
NOTCH3-205ENST00000600841 NAA60Q9H7X0 242 aa12.68□□□□□ -0.38
NOTCH3-205ENST00000600841 NDUFA13Q9P0J0 144 aa12.68□□□□□ -0.38
NOTCH3-205ENST00000600841 MRPL27Q9P0M9 148 aaKnown RBP12.68□□□□□ -0.38
NOTCH3-205ENST00000600841 SCP2D1Q9UJQ7 156 aa12.68□□□□□ -0.38
NOTCH3-205ENST00000600841 SELENOKQ9Y6D0 94 aa12.68□□□□□ -0.38
NOTCH3-205ENST00000600841 F8W735 103 aaPredicted RBP12.67□□□□□ -0.38
NOTCH3-205ENST00000600841 I3L2K1 104 aa12.67□□□□□ -0.38
NOTCH3-205ENST00000600841 ST8SIA3O43173 380 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms