RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 FBN3Q75N90 2809 aa10.6□□□□□ -0.71
VRK3-219ENST00000600137 CCL24O00175 119 aa10.6□□□□□ -0.71
VRK3-219ENST00000600137 OR2J3O76001 311 aa10.6□□□□□ -0.71
VRK3-219ENST00000600137 HLA-AP01891 365 aaKnown RBP10.6□□□□□ -0.71
VRK3-219ENST00000600137 LGALS1P09382 135 aaKnown RBP10.6□□□□□ -0.71
VRK3-219ENST00000600137 H2AFB2P0C5Z0 115 aa10.6□□□□□ -0.71
VRK3-219ENST00000600137 SPINK9Q5DT21 86 aa10.6□□□□□ -0.71
VRK3-219ENST00000600137 PVRIGQ6DKI7 326 aa10.6□□□□□ -0.71
VRK3-219ENST00000600137 HSD17B13Q7Z5P4 300 aaPredicted RBP10.6□□□□□ -0.71
VRK3-219ENST00000600137 MRPL41Q8IXM3 137 aaKnown RBP10.6□□□□□ -0.71
VRK3-219ENST00000600137 NECAP1Q8NC96 275 aa10.6□□□□□ -0.71
VRK3-219ENST00000600137 MITD1Q8WV92 249 aa10.6□□□□□ -0.71
VRK3-219ENST00000600137 USMG5Q96IX5 58 aa10.6□□□□□ -0.71
VRK3-219ENST00000600137 F11RQ9Y624 299 aaKnown RBP10.6□□□□□ -0.71
VRK3-219ENST00000600137 DNAH3Q8TD57 4116 aa10.6□□□□□ -0.71
VRK3-219ENST00000600137 A0A0G2JLM5 398 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 A0A1B0GU03 582 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 MPTX1A8MV57 137 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 NUDT19A8MXV4 375 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 ADAP1O75689 374 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 TRBV12-3P01733 135 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 SULT1A3P0DMM9 295 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 SULT1A4P0DMN0 295 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 SPCS3P61009 180 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 BSXQ3C1V8 233 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 GGNBP1Q5YKI7 109 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 C11orf87Q6NUJ2 197 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 ZNF114Q8NC26 417 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 OR11H1Q8NG94 326 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 OR1N2Q8NGR9 330 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 SEC22CQ9BRL7 303 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 FBXL7Q9UJT9 491 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 TMED3Q9Y3Q3 217 aa10.59□□□□□ -0.71
VRK3-219ENST00000600137 IGHV4OR15-8A0A075B7B6 117 aa10.58□□□□□ -0.72
VRK3-219ENST00000600137 A0A087WW49 117 aa10.58□□□□□ -0.72
VRK3-219ENST00000600137 FAM223BA6NKX1 122 aa10.58□□□□□ -0.72
VRK3-219ENST00000600137 IL5P05113 134 aa10.58□□□□□ -0.72
VRK3-219ENST00000600137 HOXB5P09067 269 aa10.58□□□□□ -0.72
VRK3-219ENST00000600137 SLC25A6P12236 298 aa10.58□□□□□ -0.72
VRK3-219ENST00000600137 SPNP16150 400 aa10.58□□□□□ -0.72
VRK3-219ENST00000600137 RAB25P57735 213 aa10.58□□□□□ -0.72
VRK3-219ENST00000600137 SMCO1Q147U7 214 aa10.58□□□□□ -0.72
VRK3-219ENST00000600137 C15orf32Q32M92 178 aa10.58□□□□□ -0.72
VRK3-219ENST00000600137 C4orf46Q504U0 113 aa10.58□□□□□ -0.72
VRK3-219ENST00000600137 FAM223AQ8IWN6 122 aa10.58□□□□□ -0.72
VRK3-219ENST00000600137 RNASE11Q8TAA1 199 aaKnown RBP10.58□□□□□ -0.72
VRK3-219ENST00000600137 MARVELD1Q9BSK0 173 aa10.58□□□□□ -0.72
VRK3-219ENST00000600137 HSPB7Q9UBY9 170 aa10.58□□□□□ -0.72
VRK3-219ENST00000600137 C13orf42A0A1B0GVH6 325 aa10.57□□□□□ -0.72
VRK3-219ENST00000600137 MFSD2BA6NFX1 497 aa10.57□□□□□ -0.72
VRK3-219ENST00000600137 IFNA17P01571 189 aa10.57□□□□□ -0.72
VRK3-219ENST00000600137 HSPB1P04792 205 aaKnown RBP10.57□□□□□ -0.72
VRK3-219ENST00000600137 RNASE2P10153 161 aaKnown RBP10.57□□□□□ -0.72
VRK3-219ENST00000600137 HIST1H1BP16401 226 aaKnown RBP10.57□□□□□ -0.72
VRK3-219ENST00000600137 ATP5G2Q06055 141 aa10.57□□□□□ -0.72
VRK3-219ENST00000600137 TNFRSF9Q07011 255 aa10.57□□□□□ -0.72
VRK3-219ENST00000600137 OR1P1Q8NH06 330 aa10.57□□□□□ -0.72
VRK3-219ENST00000600137 ZNF431Q8TF32 576 aaPredicted RBP10.57□□□□□ -0.72
VRK3-219ENST00000600137 TMEM170AQ8WVE7 144 aa10.57□□□□□ -0.72
VRK3-219ENST00000600137 CCDC140Q96MF4 163 aa10.57□□□□□ -0.72
VRK3-219ENST00000600137 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.56□□□□□ -0.72
VRK3-219ENST00000600137 PIGBOS1A0A0B4J2F0 54 aa10.56□□□□□ -0.72
VRK3-219ENST00000600137 F8W735 103 aaPredicted RBP10.56□□□□□ -0.72
VRK3-219ENST00000600137 K7EIM0 57 aa10.56□□□□□ -0.72
VRK3-219ENST00000600137 DHFRP00374 187 aa10.56□□□□□ -0.72
VRK3-219ENST00000600137 DEFA4P12838 97 aa10.56□□□□□ -0.72
VRK3-219ENST00000600137 ZNF616Q08AN1 781 aa10.56□□□□□ -0.72
VRK3-219ENST00000600137 SLC25A24Q6NUK1 477 aa10.56□□□□□ -0.72
VRK3-219ENST00000600137 ENKURQ8TC29 256 aa10.56□□□□□ -0.72
VRK3-219ENST00000600137 PLEKHA3Q9HB20 300 aa10.56□□□□□ -0.72
VRK3-219ENST00000600137 PEF1Q9UBV8 284 aaKnown RBP10.56□□□□□ -0.72
VRK3-219ENST00000600137 S4R3C0 116 aa10.56□□□□□ -0.72
VRK3-219ENST00000600137 MEGF8Q7Z7M0 2845 aa10.55□□□□□ -0.72
VRK3-219ENST00000600137 ANKRD34BA5PLL1 514 aa10.55□□□□□ -0.72
VRK3-219ENST00000600137 LINC01619G3V211 115 aa10.55□□□□□ -0.72
VRK3-219ENST00000600137 I3L2K1 104 aa10.55□□□□□ -0.72
VRK3-219ENST00000600137 BMPR1BO00238 502 aa10.55□□□□□ -0.72
VRK3-219ENST00000600137 NXPH3O95157 252 aa10.55□□□□□ -0.72
VRK3-219ENST00000600137 PF4P02776 101 aa10.55□□□□□ -0.72
VRK3-219ENST00000600137 SLURP1P55000 103 aa10.55□□□□□ -0.72
VRK3-219ENST00000600137 DEFA1P59665 94 aa10.55□□□□□ -0.72
VRK3-219ENST00000600137 DEFA3P59666 94 aa10.55□□□□□ -0.72
VRK3-219ENST00000600137 ERHP84090 104 aaKnown RBP10.55□□□□□ -0.72
VRK3-219ENST00000600137 EXOSC2Q13868 293 aaKnown RBP10.55□□□□□ -0.72
VRK3-219ENST00000600137 COQ8AQ8NI60 647 aa10.55□□□□□ -0.72
VRK3-219ENST00000600137 ZNF502Q8TBZ5 544 aa10.55□□□□□ -0.72
VRK3-219ENST00000600137 DLX4Q92988 240 aaPredicted RBP10.55□□□□□ -0.72
VRK3-219ENST00000600137 ZNF414Q96IQ9 312 aa10.55□□□□□ -0.72
VRK3-219ENST00000600137 OR10C1Q96KK4 312 aa10.55□□□□□ -0.72
VRK3-219ENST00000600137 RBKSQ9H477 322 aa10.55□□□□□ -0.72
VRK3-219ENST00000600137 RANGRFQ9HD47 186 aaPredicted RBP10.55□□□□□ -0.72
VRK3-219ENST00000600137 INMT-MINDY4F8WBC2 141 aa10.54□□□□□ -0.72
VRK3-219ENST00000600137 IGHV3-23P01764 117 aa10.54□□□□□ -0.72
VRK3-219ENST00000600137 ID3Q02535 119 aa10.54□□□□□ -0.72
VRK3-219ENST00000600137 KLF5Q13887 457 aaPredicted RBP10.54□□□□□ -0.72
VRK3-219ENST00000600137 C12orf45Q8N5I9 185 aaPredicted RBP10.54□□□□□ -0.72
VRK3-219ENST00000600137 OR4D5Q8NGN0 318 aa10.54□□□□□ -0.72
VRK3-219ENST00000600137 OR1L6Q8NGR2 347 aa10.54□□□□□ -0.72
VRK3-219ENST00000600137 VN1R17PQ8TDU5 208 aa10.54□□□□□ -0.72
VRK3-219ENST00000600137 SCARB1Q8WTV0 552 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms