RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 PHLDA1Q8WV24 401 aaPredicted RBP12.71□□□□□ -0.37
SMG9-210ENST00000600097 MAP6D1Q9H9H5 199 aa12.71□□□□□ -0.37
SMG9-210ENST00000600097 IFT46Q9NQC8 304 aa12.71□□□□□ -0.37
SMG9-210ENST00000600097 TMEM140Q9NV12 185 aa12.71□□□□□ -0.37
SMG9-210ENST00000600097 K7EMT4 169 aa12.7□□□□□ -0.38
SMG9-210ENST00000600097 RGS5O15539 181 aa12.7□□□□□ -0.38
SMG9-210ENST00000600097 TRAPPC2P0DI81 140 aa12.7□□□□□ -0.38
SMG9-210ENST00000600097 TRAPPC2BP0DI82 140 aa12.7□□□□□ -0.38
SMG9-210ENST00000600097 OR13C7P0DN81 318 aa12.7□□□□□ -0.38
SMG9-210ENST00000600097 RPL35AP18077 110 aaKnown RBP12.7□□□□□ -0.38
SMG9-210ENST00000600097 SLC25A24Q6NUK1 477 aa12.7□□□□□ -0.38
SMG9-210ENST00000600097 OR10W1Q8NGF6 305 aa12.7□□□□□ -0.38
SMG9-210ENST00000600097 C15orf40Q8WUR7 153 aa12.7□□□□□ -0.38
SMG9-210ENST00000600097 BORCS5Q969J3 196 aa12.7□□□□□ -0.38
SMG9-210ENST00000600097 C20orf24Q9BUV8 137 aa12.7□□□□□ -0.38
SMG9-210ENST00000600097 COMMD9Q9P000 198 aa12.7□□□□□ -0.38
SMG9-210ENST00000600097 GVQW1Q8N7I0 195 aa12.69□□□□□ -0.38
SMG9-210ENST00000600097 OR1L8Q8NGR8 309 aa12.69□□□□□ -0.38
SMG9-210ENST00000600097 OR51H1Q8NH63 302 aa12.69□□□□□ -0.38
SMG9-210ENST00000600097 C21orf62Q9NYP8 219 aa12.69□□□□□ -0.38
SMG9-210ENST00000600097 RSL24D1Q9UHA3 163 aaKnown RBP12.69□□□□□ -0.38
SMG9-210ENST00000600097 C15orf62A8K5M9 175 aa12.68□□□□□ -0.38
SMG9-210ENST00000600097 ZNF701M0R085 212 aaPredicted RBP12.68□□□□□ -0.38
SMG9-210ENST00000600097 S1PR2O95136 353 aa12.68□□□□□ -0.38
SMG9-210ENST00000600097 PTHLHP12272 177 aa12.68□□□□□ -0.38
SMG9-210ENST00000600097 CMC4P56277 68 aaPredicted RBP12.68□□□□□ -0.38
SMG9-210ENST00000600097 FXYD4P59646 89 aa12.68□□□□□ -0.38
SMG9-210ENST00000600097 ERVK-16P61578 105 aa12.68□□□□□ -0.38
SMG9-210ENST00000600097 WT1-ASQ06250 92 aa12.68□□□□□ -0.38
SMG9-210ENST00000600097 AADACL3Q5VUY0 350 aa12.68□□□□□ -0.38
SMG9-210ENST00000600097 ZNF818PQ6ZRF7 136 aa12.68□□□□□ -0.38
SMG9-210ENST00000600097 GATAD1Q8WUU5 269 aa12.68□□□□□ -0.38
SMG9-210ENST00000600097 GIMAP1Q8WWP7 306 aa12.68□□□□□ -0.38
SMG9-210ENST00000600097 LSM10Q969L4 123 aaKnown RBP12.68□□□□□ -0.38
SMG9-210ENST00000600097 CHRDL1Q9BU40 450 aa12.68□□□□□ -0.38
SMG9-210ENST00000600097 SCPEP1Q9HB40 452 aa12.68□□□□□ -0.38
SMG9-210ENST00000600097 EXTL2Q9UBQ6 330 aa12.68□□□□□ -0.38
SMG9-210ENST00000600097 F11RQ9Y624 299 aaKnown RBP12.68□□□□□ -0.38
SMG9-210ENST00000600097 TEX50A0A1B0GTY4 177 aa12.67□□□□□ -0.38
SMG9-210ENST00000600097 DEDDO75618 318 aa12.67□□□□□ -0.38
SMG9-210ENST00000600097 CTSDP07339 412 aaPredicted RBP12.67□□□□□ -0.38
SMG9-210ENST00000600097 OR5AP2Q8NGF4 316 aa12.67□□□□□ -0.38
SMG9-210ENST00000600097 OR5B3Q8NH48 314 aa12.67□□□□□ -0.38
SMG9-210ENST00000600097 SCARB1Q8WTV0 552 aa12.67□□□□□ -0.38
SMG9-210ENST00000600097 MFFQ9GZY8 342 aa12.67□□□□□ -0.38
SMG9-210ENST00000600097 CSTL1Q9H114 145 aa12.67□□□□□ -0.38
SMG9-210ENST00000600097 NDUFA4L2Q9NRX3 87 aa12.67□□□□□ -0.38
SMG9-210ENST00000600097 RABL2AQ9UBK7 228 aaPredicted RBP12.67□□□□□ -0.38
SMG9-210ENST00000600097 RABL2BQ9UNT1 228 aa12.67□□□□□ -0.38
SMG9-210ENST00000600097 MEIS3P1A6NDR6 274 aa12.66□□□□□ -0.38
SMG9-210ENST00000600097 MARCH11A6NNE9 402 aa12.66□□□□□ -0.38
SMG9-210ENST00000600097 MPTX1A8MV57 137 aa12.66□□□□□ -0.38
SMG9-210ENST00000600097 FCGR2BP31994 310 aaPredicted RBP12.66□□□□□ -0.38
SMG9-210ENST00000600097 ADMP35318 185 aa12.66□□□□□ -0.38
SMG9-210ENST00000600097 TMEM17Q86X19 198 aa12.66□□□□□ -0.38
SMG9-210ENST00000600097 SNX29P2Q8IUI4 249 aa12.66□□□□□ -0.38
SMG9-210ENST00000600097 CADM3Q8N126 398 aa12.66□□□□□ -0.38
SMG9-210ENST00000600097 UBAC2Q8NBM4 344 aa12.66□□□□□ -0.38
SMG9-210ENST00000600097 RARRES2Q99969 163 aa12.66□□□□□ -0.38
SMG9-210ENST00000600097 NDUFA13Q9P0J0 144 aa12.66□□□□□ -0.38
SMG9-210ENST00000600097 SMPXQ9UHP9 88 aa12.66□□□□□ -0.38
SMG9-210ENST00000600097 IGHV3OR16-8A0A075B7F1 116 aa12.65□□□□□ -0.38
SMG9-210ENST00000600097 IGHV3-21A0A0B4J1V1 117 aa12.65□□□□□ -0.38
SMG9-210ENST00000600097 F8W735 103 aaPredicted RBP12.65□□□□□ -0.38
SMG9-210ENST00000600097 CTDSP2O14595 271 aa12.65□□□□□ -0.38
SMG9-210ENST00000600097 ZNF207O43670 478 aaKnown RBP12.65□□□□□ -0.38
SMG9-210ENST00000600097 NAT1P18440 290 aa12.65□□□□□ -0.38
SMG9-210ENST00000600097 MFAP2P55001 183 aa12.65□□□□□ -0.38
SMG9-210ENST00000600097 TAS2R46P59540 309 aa12.65□□□□□ -0.38
SMG9-210ENST00000600097 HERV-K104P61576 105 aa12.65□□□□□ -0.38
SMG9-210ENST00000600097 RELQ04864 619 aaPredicted RBP12.65□□□□□ -0.38
SMG9-210ENST00000600097 Q56UQ5 140 aa12.65□□□□□ -0.38
SMG9-210ENST00000600097 APRG1Q8IVJ8 170 aa12.65□□□□□ -0.38
SMG9-210ENST00000600097 MCFD2Q8NI22 146 aa12.65□□□□□ -0.38
SMG9-210ENST00000600097 GPX8Q8TED1 209 aa12.65□□□□□ -0.38
SMG9-210ENST00000600097 HINT2Q9BX68 163 aa12.65□□□□□ -0.38
SMG9-210ENST00000600097 SLIRPQ9GZT3 109 aaKnown RBP12.65□□□□□ -0.38
SMG9-210ENST00000600097 RBM38Q9H0Z9 239 aaKnown RBP12.65□□□□□ -0.38
SMG9-210ENST00000600097 ANAPC10Q9UM13 185 aa12.65□□□□□ -0.38
SMG9-210ENST00000600097 FRAS1Q86XX4 4008 aa12.65□□□□□ -0.38
SMG9-210ENST00000600097 K7EIM0 57 aa12.64□□□□□ -0.39
SMG9-210ENST00000600097 SNAPC5O75971 98 aa12.64□□□□□ -0.39
SMG9-210ENST00000600097 IFNA4P05014 189 aa12.64□□□□□ -0.39
SMG9-210ENST00000600097 CTSGP08311 255 aa12.64□□□□□ -0.39
SMG9-210ENST00000600097 F2RP25116 425 aa12.64□□□□□ -0.39
SMG9-210ENST00000600097 GNRHRP30968 328 aa12.64□□□□□ -0.39
SMG9-210ENST00000600097 RBMS2Q15434 407 aaKnown RBP12.64□□□□□ -0.39
SMG9-210ENST00000600097 C11orf45Q8TAV5 145 aa12.64□□□□□ -0.39
SMG9-210ENST00000600097 DIRAS2Q96HU8 199 aa12.64□□□□□ -0.39
SMG9-210ENST00000600097 TMEM56Q96MV1 263 aa12.64□□□□□ -0.39
SMG9-210ENST00000600097 RNF2Q99496 336 aa12.64□□□□□ -0.39
SMG9-210ENST00000600097 RHPN1-AS1Q9BWJ2 59 aa12.64□□□□□ -0.39
SMG9-210ENST00000600097 MIXL1Q9H2W2 232 aa12.64□□□□□ -0.39
SMG9-210ENST00000600097 C11orf68Q9H3H3 251 aaKnown RBP12.64□□□□□ -0.39
SMG9-210ENST00000600097 OR51B2Q9Y5P1 312 aa12.64□□□□□ -0.39
SMG9-210ENST00000600097 IGHV7-4-1A0A0J9YVY3 117 aa12.63□□□□□ -0.39
SMG9-210ENST00000600097 CHEK1O14757 476 aa12.63□□□□□ -0.39
SMG9-210ENST00000600097 NUPL2O15504 423 aaKnown RBP12.63□□□□□ -0.39
SMG9-210ENST00000600097 FCER2P06734 321 aa12.63□□□□□ -0.39
SMG9-210ENST00000600097 RCVRNP35243 200 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms