RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 PLEKHA3Q9HB20 300 aa14.18□□□□□ -0.14
PNKP-213ENST00000599543 GGCTO75223 188 aaKnown RBP14.17□□□□□ -0.14
PNKP-213ENST00000599543 HLA-AP01891 365 aaKnown RBP14.17□□□□□ -0.14
PNKP-213ENST00000599543 OR5AC1P0C628 307 aa14.17□□□□□ -0.14
PNKP-213ENST00000599543 IL7P13232 177 aa14.17□□□□□ -0.14
PNKP-213ENST00000599543 AREGP15514 252 aa14.17□□□□□ -0.14
PNKP-213ENST00000599543 CCR6P51684 374 aa14.17□□□□□ -0.14
PNKP-213ENST00000599543 TRIM16LQ309B1 348 aa14.17□□□□□ -0.14
PNKP-213ENST00000599543 AIFM2Q9BRQ8 373 aa14.17□□□□□ -0.14
PNKP-213ENST00000599543 NAA60Q9H7X0 242 aa14.17□□□□□ -0.14
PNKP-213ENST00000599543 DBX1A6NMT0 343 aa14.16□□□□□ -0.14
PNKP-213ENST00000599543 AKR1C4P17516 323 aa14.16□□□□□ -0.14
PNKP-213ENST00000599543 ADAMTSL5Q6ZMM2 481 aa14.16□□□□□ -0.14
PNKP-213ENST00000599543 TMED4Q7Z7H5 227 aa14.16□□□□□ -0.14
PNKP-213ENST00000599543 OR4A5Q8NH83 315 aa14.16□□□□□ -0.14
PNKP-213ENST00000599543 SEC22AQ96IW7 307 aa14.16□□□□□ -0.14
PNKP-213ENST00000599543 NEURL2Q9BR09 285 aa14.16□□□□□ -0.14
PNKP-213ENST00000599543 HINT2Q9BX68 163 aa14.16□□□□□ -0.14
PNKP-213ENST00000599543 BATF3Q9NR55 127 aa14.16□□□□□ -0.14
PNKP-213ENST00000599543 PTTG2Q9NZH5 202 aa14.16□□□□□ -0.14
PNKP-213ENST00000599543 RYR2Q92736 4967 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 CRYM-AS1A6NIL9 109 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 C2orf70A6NJV1 201 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 OR2C1O95371 312 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 IGKV1-5P01602 117 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 IGHV3-23P01764 117 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 CRYGCP07315 174 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 DEFA4P12838 97 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 FOLR2P14207 255 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 PSMB6P28072 239 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 ARL3P36405 182 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 SURF2Q15527 256 aaPredicted RBP14.15□□□□□ -0.14
PNKP-213ENST00000599543 OR10W1Q8NGF6 305 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 LHFPL5Q8TAF8 219 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 EEF1AKMT3Q96AZ1 226 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 CCDC140Q96MF4 163 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 TECRQ9NZ01 308 aaKnown RBP14.15□□□□□ -0.14
PNKP-213ENST00000599543 DMRT1Q9Y5R6 373 aa14.15□□□□□ -0.14
PNKP-213ENST00000599543 A0A0G2JRQ6 117 aa14.14□□□□□ -0.15
PNKP-213ENST00000599543 TEX50A0A1B0GTY4 177 aa14.14□□□□□ -0.15
PNKP-213ENST00000599543 LGALS9O00182 355 aa14.14□□□□□ -0.15
PNKP-213ENST00000599543 SNAPC5O75971 98 aa14.14□□□□□ -0.15
PNKP-213ENST00000599543 NDUFB8O95169 186 aa14.14□□□□□ -0.15
PNKP-213ENST00000599543 HIST1H1BP16401 226 aaKnown RBP14.14□□□□□ -0.15
PNKP-213ENST00000599543 GUCA2BQ16661 112 aa14.14□□□□□ -0.15
PNKP-213ENST00000599543 DEFB114Q30KQ6 69 aa14.14□□□□□ -0.15
PNKP-213ENST00000599543 CLEC19AQ6UXS0 136 aa14.14□□□□□ -0.15
PNKP-213ENST00000599543 H2BFWTQ7Z2G1 175 aa14.14□□□□□ -0.15
PNKP-213ENST00000599543 FANCD2OSQ96PS1 177 aa14.14□□□□□ -0.15
PNKP-213ENST00000599543 COMMD5Q9GZQ3 224 aa14.14□□□□□ -0.15
PNKP-213ENST00000599543 OR51B2Q9Y5P1 312 aa14.14□□□□□ -0.15
PNKP-213ENST00000599543 S4R3C0 116 aa14.14□□□□□ -0.15
PNKP-213ENST00000599543 LCE6AA0A183 80 aa14.13□□□□□ -0.15
PNKP-213ENST00000599543 CD7P09564 240 aa14.13□□□□□ -0.15
PNKP-213ENST00000599543 CTRB1P17538 263 aa14.13□□□□□ -0.15
PNKP-213ENST00000599543 UCP1P25874 307 aa14.13□□□□□ -0.15
PNKP-213ENST00000599543 AKR1C2P52895 323 aa14.13□□□□□ -0.15
PNKP-213ENST00000599543 SPINK9Q5DT21 86 aa14.13□□□□□ -0.15
PNKP-213ENST00000599543 CTRB2Q6GPI1 263 aa14.13□□□□□ -0.15
PNKP-213ENST00000599543 GPHB5Q86YW7 130 aa14.13□□□□□ -0.15
PNKP-213ENST00000599543 GLYATL2Q8WU03 294 aa14.13□□□□□ -0.15
PNKP-213ENST00000599543 ZC4H2Q9NQZ6 224 aa14.13□□□□□ -0.15
PNKP-213ENST00000599543 FAM212BQ9NTI7 297 aaPredicted RBP14.13□□□□□ -0.15
PNKP-213ENST00000599543 SACSQ9NZJ4 4579 aa14.13□□□□□ -0.15
PNKP-213ENST00000599543 ZNF320A2RRD8 509 aa14.12□□□□□ -0.15
PNKP-213ENST00000599543 ZNF785A8K8V0 405 aa14.12□□□□□ -0.15
PNKP-213ENST00000599543 EDN2P20800 178 aa14.12□□□□□ -0.15
PNKP-213ENST00000599543 SUPT4H1P63272 117 aaKnown RBP14.12□□□□□ -0.15
PNKP-213ENST00000599543 FAM106AQ4KMX7 169 aa14.12□□□□□ -0.15
PNKP-213ENST00000599543 RNASE11Q8TAA1 199 aaKnown RBP14.12□□□□□ -0.15
PNKP-213ENST00000599543 WDR89Q96FK6 387 aaPredicted RBP14.12□□□□□ -0.15
PNKP-213ENST00000599543 QTRT1Q9BXR0 403 aaKnown RBP14.12□□□□□ -0.15
PNKP-213ENST00000599543 TMEM222Q9H0R3 208 aa14.12□□□□□ -0.15
PNKP-213ENST00000599543 RETNQ9HD89 108 aa14.12□□□□□ -0.15
PNKP-213ENST00000599543 GAR1Q9NY12 217 aaKnown RBP14.12□□□□□ -0.15
PNKP-213ENST00000599543 FLVCR2Q9UPI3 526 aa14.12□□□□□ -0.15
PNKP-213ENST00000599543 TRBV7-1A0A0A6YYK4 115 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 IGLC7A0M8Q6 106 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 OR11H12B2RN74 326 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 PLA2G10O15496 165 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 CBLN1P23435 193 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 BTCP35070 178 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 TMEM268Q5VZI3 342 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 SLC16A13Q7RTY0 426 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 SELENOHQ8IZQ5 122 aaKnown RBP14.11□□□□□ -0.15
PNKP-213ENST00000599543 DEFB125Q8N687 156 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 OR4A16Q8NH70 328 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 CACNG8Q8WXS5 425 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 CXorf58Q96LI9 332 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 SCGB3A2Q96PL1 93 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 WFDC10AQ9H1F0 79 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 HIPK2Q9H2X6 1198 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 SRD5A3Q9H8P0 318 aa14.11□□□□□ -0.15
PNKP-213ENST00000599543 IGLV11-55A0A075B6I3 123 aa14.1□□□□□ -0.15
PNKP-213ENST00000599543 MFSD2BA6NFX1 497 aa14.1□□□□□ -0.15
PNKP-213ENST00000599543 C15orf61A6NNL5 157 aa14.1□□□□□ -0.15
PNKP-213ENST00000599543 A8MWP6 167 aa14.1□□□□□ -0.15
PNKP-213ENST00000599543 TRAPPC2P0DI81 140 aa14.1□□□□□ -0.15
PNKP-213ENST00000599543 TRAPPC2BP0DI82 140 aa14.1□□□□□ -0.15
PNKP-213ENST00000599543 TMEM187Q14656 261 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms