RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 PRCDQ00LT1 54 aa10.6□□□□□ -0.71
UPF1-205ENST00000598209 TATDN3Q17R31 274 aa10.6□□□□□ -0.71
UPF1-205ENST00000598209 SLC25A24Q6NUK1 477 aa10.6□□□□□ -0.71
UPF1-205ENST00000598209 CLEC19AQ6UXS0 136 aa10.6□□□□□ -0.71
UPF1-205ENST00000598209 LHFPL5Q8TAF8 219 aa10.6□□□□□ -0.71
UPF1-205ENST00000598209 RBPMSQ93062 196 aaKnown RBP10.6□□□□□ -0.71
UPF1-205ENST00000598209 CXorf58Q96LI9 332 aa10.6□□□□□ -0.71
UPF1-205ENST00000598209 OR4C12Q96R67 309 aa10.6□□□□□ -0.71
UPF1-205ENST00000598209 THYN1Q9P016 225 aa10.6□□□□□ -0.71
UPF1-205ENST00000598209 F11RQ9Y624 299 aaKnown RBP10.6□□□□□ -0.71
UPF1-205ENST00000598209 TRBV7-1A0A0A6YYK4 115 aa10.59□□□□□ -0.71
UPF1-205ENST00000598209 AKR1C4P17516 323 aa10.59□□□□□ -0.71
UPF1-205ENST00000598209 INPP1P49441 399 aa10.59□□□□□ -0.71
UPF1-205ENST00000598209 MFAP2P55001 183 aa10.59□□□□□ -0.71
UPF1-205ENST00000598209 BAK1Q16611 211 aa10.59□□□□□ -0.71
UPF1-205ENST00000598209 TRIQKQ629K1 86 aa10.59□□□□□ -0.71
UPF1-205ENST00000598209 SELENOHQ8IZQ5 122 aaKnown RBP10.59□□□□□ -0.71
UPF1-205ENST00000598209 OR2C3Q8N628 320 aa10.59□□□□□ -0.71
UPF1-205ENST00000598209 OR9G4Q8NGQ1 327 aa10.59□□□□□ -0.71
UPF1-205ENST00000598209 GALNT14Q96FL9 552 aa10.59□□□□□ -0.71
UPF1-205ENST00000598209 SDHCQ99643 169 aaPredicted RBP10.59□□□□□ -0.71
UPF1-205ENST00000598209 PLEKHA3Q9HB20 300 aa10.59□□□□□ -0.71
UPF1-205ENST00000598209 KCNIP3Q9Y2W7 256 aa10.59□□□□□ -0.71
UPF1-205ENST00000598209 ST8SIA3O43173 380 aa10.58□□□□□ -0.72
UPF1-205ENST00000598209 GGCTO75223 188 aaKnown RBP10.58□□□□□ -0.72
UPF1-205ENST00000598209 HLA-AP01891 365 aaKnown RBP10.58□□□□□ -0.72
UPF1-205ENST00000598209 ARL3P36405 182 aa10.58□□□□□ -0.72
UPF1-205ENST00000598209 TMEM187Q14656 261 aa10.58□□□□□ -0.72
UPF1-205ENST00000598209 SPINK9Q5DT21 86 aa10.58□□□□□ -0.72
UPF1-205ENST00000598209 TMEM268Q5VZI3 342 aa10.58□□□□□ -0.72
UPF1-205ENST00000598209 TMED4Q7Z7H5 227 aa10.58□□□□□ -0.72
UPF1-205ENST00000598209 FAM219AQ8IW50 185 aa10.58□□□□□ -0.72
UPF1-205ENST00000598209 SLC35G3Q8N808 338 aa10.58□□□□□ -0.72
UPF1-205ENST00000598209 OR1L6Q8NGR2 347 aa10.58□□□□□ -0.72
UPF1-205ENST00000598209 ZNF502Q8TBZ5 544 aa10.58□□□□□ -0.72
UPF1-205ENST00000598209 PRR25Q96S07 402 aa10.58□□□□□ -0.72
UPF1-205ENST00000598209 PDCD10Q9BUL8 212 aa10.58□□□□□ -0.72
UPF1-205ENST00000598209 PRR13Q9NZ81 148 aa10.58□□□□□ -0.72
UPF1-205ENST00000598209 ZNF256Q9Y2P7 627 aaPredicted RBP10.58□□□□□ -0.72
UPF1-205ENST00000598209 TMEM56-RWDD3S4R434 201 aa10.58□□□□□ -0.72
UPF1-205ENST00000598209 OR2C1O95371 312 aa10.57□□□□□ -0.72
UPF1-205ENST00000598209 LY86O95711 162 aa10.57□□□□□ -0.72
UPF1-205ENST00000598209 IFNA17P01571 189 aa10.57□□□□□ -0.72
UPF1-205ENST00000598209 SUPT4H1P63272 117 aaKnown RBP10.57□□□□□ -0.72
UPF1-205ENST00000598209 ERHP84090 104 aaKnown RBP10.57□□□□□ -0.72
UPF1-205ENST00000598209 DEFB121Q5J5C9 76 aa10.57□□□□□ -0.72
UPF1-205ENST00000598209 IL34Q6ZMJ4 242 aa10.57□□□□□ -0.72
UPF1-205ENST00000598209 Q6ZRM9 215 aa10.57□□□□□ -0.72
UPF1-205ENST00000598209 HAPLN4Q86UW8 402 aa10.57□□□□□ -0.72
UPF1-205ENST00000598209 OR1P1Q8NH06 330 aa10.57□□□□□ -0.72
UPF1-205ENST00000598209 VN1R17PQ8TDU5 208 aa10.57□□□□□ -0.72
UPF1-205ENST00000598209 IL22RA2Q969J5 263 aa10.57□□□□□ -0.72
UPF1-205ENST00000598209 SLC25A21Q9BQT8 299 aaPredicted RBP10.57□□□□□ -0.72
UPF1-205ENST00000598209 PEMTQ9UBM1 199 aa10.57□□□□□ -0.72
UPF1-205ENST00000598209 IGHV3-21A0A0B4J1V1 117 aa10.56□□□□□ -0.72
UPF1-205ENST00000598209 CLEC3BP05452 202 aa10.56□□□□□ -0.72
UPF1-205ENST00000598209 CSN3P07498 182 aa10.56□□□□□ -0.72
UPF1-205ENST00000598209 ANXA3P12429 323 aa10.56□□□□□ -0.72
UPF1-205ENST00000598209 SPNP16150 400 aa10.56□□□□□ -0.72
UPF1-205ENST00000598209 GPR183P32249 361 aa10.56□□□□□ -0.72
UPF1-205ENST00000598209 ZNF114Q8NC26 417 aa10.56□□□□□ -0.72
UPF1-205ENST00000598209 GPR146Q96CH1 333 aa10.56□□□□□ -0.72
UPF1-205ENST00000598209 ZC4H2Q9NQZ6 224 aa10.56□□□□□ -0.72
UPF1-205ENST00000598209 CACNG5Q9UF02 275 aa10.56□□□□□ -0.72
UPF1-205ENST00000598209 LINC00854A0A1B0GVQ3 168 aa10.55□□□□□ -0.72
UPF1-205ENST00000598209 NAP1L6A6NFF2 107 aa10.55□□□□□ -0.72
UPF1-205ENST00000598209 A6NHS1 94 aa10.55□□□□□ -0.72
UPF1-205ENST00000598209 K7EIM0 57 aa10.55□□□□□ -0.72
UPF1-205ENST00000598209 IGLV1-51P01701 117 aa10.55□□□□□ -0.72
UPF1-205ENST00000598209 IL7P13232 177 aa10.55□□□□□ -0.72
UPF1-205ENST00000598209 HOXA1P49639 335 aaPredicted RBP10.55□□□□□ -0.72
UPF1-205ENST00000598209 CCR6P51684 374 aa10.55□□□□□ -0.72
UPF1-205ENST00000598209 RBMS2Q15434 407 aaKnown RBP10.55□□□□□ -0.72
UPF1-205ENST00000598209 TMEM128Q5BJH2 165 aa10.55□□□□□ -0.72
UPF1-205ENST00000598209 GPHB5Q86YW7 130 aa10.55□□□□□ -0.72
UPF1-205ENST00000598209 LGI3Q8N145 548 aa10.55□□□□□ -0.72
UPF1-205ENST00000598209 SCARB1Q8WTV0 552 aa10.55□□□□□ -0.72
UPF1-205ENST00000598209 MISP3Q96FF7 219 aa10.55□□□□□ -0.72
UPF1-205ENST00000598209 ENY2Q9NPA8 101 aa10.55□□□□□ -0.72
UPF1-205ENST00000598209 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.55□□□□□ -0.72
UPF1-205ENST00000598209 C21orf62Q9NYP8 219 aa10.55□□□□□ -0.72
UPF1-205ENST00000598209 A0A0B4J2A0 478 aa10.54□□□□□ -0.72
UPF1-205ENST00000598209 INS-IGF2F8WCM5 200 aa10.54□□□□□ -0.72
UPF1-205ENST00000598209 LGALS9O00182 355 aa10.54□□□□□ -0.72
UPF1-205ENST00000598209 VAMP1P23763 118 aa10.54□□□□□ -0.72
UPF1-205ENST00000598209 SPCS3P61009 180 aa10.54□□□□□ -0.72
UPF1-205ENST00000598209 SRPXP78539 464 aa10.54□□□□□ -0.72
UPF1-205ENST00000598209 DCTN2Q13561 401 aaKnown RBP10.54□□□□□ -0.72
UPF1-205ENST00000598209 CNPY1Q3B7I2 92 aa10.54□□□□□ -0.72
UPF1-205ENST00000598209 AARDQ4LEZ3 155 aa10.54□□□□□ -0.72
UPF1-205ENST00000598209 PLET1Q6UQ28 207 aa10.54□□□□□ -0.72
UPF1-205ENST00000598209 CENPSQ8N2Z9 138 aa10.54□□□□□ -0.72
UPF1-205ENST00000598209 OR52E5Q8NH55 327 aa10.54□□□□□ -0.72
UPF1-205ENST00000598209 SIGLEC8Q9NYZ4 499 aa10.54□□□□□ -0.72
UPF1-205ENST00000598209 SHPKQ9UHJ6 478 aa10.54□□□□□ -0.72
UPF1-205ENST00000598209 ZNF320A2RRD8 509 aa10.53□□□□□ -0.72
UPF1-205ENST00000598209 OR2T8A6NH00 312 aa10.53□□□□□ -0.72
UPF1-205ENST00000598209 CENPXA8MT69 81 aa10.53□□□□□ -0.72
UPF1-205ENST00000598209 I3L2K1 104 aa10.53□□□□□ -0.72
UPF1-205ENST00000598209 TGOLN2O43493 480 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms