RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	OR5B3	Q8NH48	314 aa		7.79	□□□□□ -1.16
LSM4-205	ENST00000597776	BORCS5	Q969J3	196 aa		7.79	□□□□□ -1.16
LSM4-205	ENST00000597776	DGCR14	Q96DF8	476 aa	Known RBP	7.79	□□□□□ -1.16
LSM4-205	ENST00000597776	ANAPC10	Q9UM13	185 aa		7.79	□□□□□ -1.16
LSM4-205	ENST00000597776	IGHV3-49	A0A0A0MS15	119 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	KIR2DL5B	A0A0G2JN68	375 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	KIR2DL5B	A0A0G2JPC4	375 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	OR4C46	A6NHA9	309 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	UBE2C	O00762	179 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	FCGR2B	P31994	310 aa	Predicted RBP	7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	ZNF124	Q15973	351 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	UBE2NL	Q5JXB2	153 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	TMEM69	Q5SWH9	247 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	KIR2DL5A	Q8N109	375 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	STPG3	Q8N7X2	389 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	SAMD12	Q8N8I0	201 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	TSPAN14	Q8NG11	270 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	KIR2DL5B	Q8NHK3	375 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	RNF183	Q96D59	192 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	S100A16	Q96FQ6	103 aa	Known RBP	7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	RNF2	Q99496	336 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	KMT2A	Q03164	3969 aa		7.78	□□□□□ -1.16
LSM4-205	ENST00000597776	IGKV3-7	A0A075B6H7	116 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	C15orf61	A6NNL5	157 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	C15orf62	A8K5M9	175 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776		K7EMT4	169 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	GPR31	O00270	319 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	IGHV3-48	P01763	117 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	CTSG	P08311	255 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	NAT1	P18440	290 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	HLA-DMA	P28067	261 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	HRH1	P35367	487 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	RPS19	P39019	145 aa	Known RBP	7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	TFPI2	P48307	235 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	TAS2R46	P59540	309 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	LSM3	P62310	102 aa	Known RBP	7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	CMTM1	Q8IZ96	169 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	OR6F1	Q8NGZ6	308 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	MISP3	Q96FF7	219 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	ATP6V0B	Q99437	205 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	MAP6D1	Q9H9H5	199 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	TMEM14B	Q9NUH8	114 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	SMPX	Q9UHP9	88 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	PRND	Q9UKY0	176 aa		7.77	□□□□□ -1.17
LSM4-205	ENST00000597776	IGHV3OR16-13	A0A075B7E8	117 aa		7.76	□□□□□ -1.17
LSM4-205	ENST00000597776	IGHV3-74	A0A0B4J1X5	117 aa		7.76	□□□□□ -1.17
LSM4-205	ENST00000597776	IGHV7-4-1	A0A0J9YVY3	117 aa		7.76	□□□□□ -1.17
LSM4-205	ENST00000597776	CHEK1	O14757	476 aa		7.76	□□□□□ -1.17
LSM4-205	ENST00000597776	NUPL2	O15504	423 aa	Known RBP	7.76	□□□□□ -1.17
LSM4-205	ENST00000597776	TMEM127	O75204	238 aa		7.76	□□□□□ -1.17
LSM4-205	ENST00000597776	YIF1A	O95070	293 aa		7.76	□□□□□ -1.17
LSM4-205	ENST00000597776	LYSMD2	Q8IV50	215 aa		7.76	□□□□□ -1.17
LSM4-205	ENST00000597776	CADM3	Q8N126	398 aa		7.76	□□□□□ -1.17
LSM4-205	ENST00000597776	RPP25L	Q8N5L8	163 aa	Known RBP	7.76	□□□□□ -1.17
LSM4-205	ENST00000597776	OR1P1	Q8NH06	330 aa		7.76	□□□□□ -1.17
LSM4-205	ENST00000597776	SLC25A46	Q96AG3	418 aa		7.76	□□□□□ -1.17
LSM4-205	ENST00000597776	GALNT14	Q96FL9	552 aa		7.76	□□□□□ -1.17
LSM4-205	ENST00000597776	TMEM56	Q96MV1	263 aa		7.76	□□□□□ -1.17
LSM4-205	ENST00000597776	RHPN1-AS1	Q9BWJ2	59 aa		7.76	□□□□□ -1.17
LSM4-205	ENST00000597776		I3L2K1	104 aa		7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	MT-CO2	P00403	227 aa		7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	IGKV1-39	P01597	117 aa		7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	IGKV1D-39	P04432	117 aa		7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	EIF4E	P06730	217 aa	Known RBP	7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	PRSS3	P35030	304 aa		7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	REL	Q04864	619 aa	Predicted RBP	7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	IZUMO4	Q1ZYL8	232 aa		7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	KCTD21	Q4G0X4	260 aa		7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	SPINK9	Q5DT21	86 aa		7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	TBC1D26	Q86UD7	250 aa		7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	CROCCP3	Q8IVE0	287 aa		7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	GBGT1	Q8N5D6	347 aa		7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	TMEM116	Q8NCL8	245 aa		7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	PHLDA1	Q8WV24	401 aa	Predicted RBP	7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	MRGPRF	Q96AM1	343 aa		7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	PINX1	Q96BK5	328 aa	Known RBP	7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	SEC22A	Q96IW7	307 aa		7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	FKBP11	Q9NYL4	201 aa		7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	KLK5	Q9Y337	293 aa	Predicted RBP	7.75	□□□□□ -1.17
LSM4-205	ENST00000597776	DNAH10	Q8IVF4	4471 aa		7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	DEDD	O75618	318 aa		7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	ATF4	P18848	351 aa	Predicted RBP	7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	MFAP4	P55083	255 aa		7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	FAM90A2P	Q658T7	463 aa		7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	H2BFWT	Q7Z2G1	175 aa		7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	SNX29P2	Q8IUI4	249 aa		7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	TMEM217	Q8N7C4	229 aa		7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	OR4A16	Q8NH70	328 aa		7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	GPX8	Q8TED1	209 aa		7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	YIPF6	Q96EC8	236 aa		7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	OR10C1	Q96KK4	312 aa		7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	TSC22D3	Q99576	134 aa		7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	C6orf62	Q9GZU0	229 aa	Predicted RBP	7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	NXF2	Q9GZY0	626 aa	Known RBP	7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	CSTL1	Q9H114	145 aa		7.74	□□□□□ -1.17
LSM4-205	ENST00000597776	TRAV14DV4	A0A0A6YYC5	116 aa		7.73	□□□□□ -1.17
LSM4-205	ENST00000597776	IGHV3-66	A0A0C4DH42	116 aa		7.73	□□□□□ -1.17
LSM4-205	ENST00000597776	MPTX1	A8MV57	137 aa		7.73	□□□□□ -1.17
LSM4-205	ENST00000597776	GNG7	O60262	68 aa		7.73	□□□□□ -1.17
LSM4-205	ENST00000597776	APOH	P02749	345 aa	Predicted RBP	7.73	□□□□□ -1.17

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