RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 SPINK9Q5DT21 86 aa11.17□□□□□ -0.62
VRK3-213ENST00000597215 OR4F17Q8NGA8 305 aa11.17□□□□□ -0.62
VRK3-213ENST00000597215 OR1S1Q8NH92 325 aa11.17□□□□□ -0.62
VRK3-213ENST00000597215 C4orf3Q8WVX3 66 aa11.17□□□□□ -0.62
VRK3-213ENST00000597215 OR4F4Q96R69 305 aa11.17□□□□□ -0.62
VRK3-213ENST00000597215 FBN3Q75N90 2809 aa11.16□□□□□ -0.62
VRK3-213ENST00000597215 TRBV9A0A0B4J1U6 114 aa11.16□□□□□ -0.62
VRK3-213ENST00000597215 C13orf42A0A1B0GVH6 325 aa11.16□□□□□ -0.62
VRK3-213ENST00000597215 FAM223BA6NKX1 122 aa11.16□□□□□ -0.62
VRK3-213ENST00000597215 INS-IGF2F8WCM5 200 aa11.16□□□□□ -0.62
VRK3-213ENST00000597215 ADAP1O75689 374 aa11.16□□□□□ -0.62
VRK3-213ENST00000597215 SPNP16150 400 aa11.16□□□□□ -0.62
VRK3-213ENST00000597215 RHOGP84095 191 aa11.16□□□□□ -0.62
VRK3-213ENST00000597215 PDLIM3Q53GG5 364 aaPredicted RBP11.16□□□□□ -0.62
VRK3-213ENST00000597215 C19orf35Q6ZS72 473 aa11.16□□□□□ -0.62
VRK3-213ENST00000597215 C18orf65Q6ZTR6 163 aa11.16□□□□□ -0.62
VRK3-213ENST00000597215 FAM223AQ8IWN6 122 aa11.16□□□□□ -0.62
VRK3-213ENST00000597215 C12orf45Q8N5I9 185 aaPredicted RBP11.16□□□□□ -0.62
VRK3-213ENST00000597215 OR2C3Q8N628 320 aa11.16□□□□□ -0.62
VRK3-213ENST00000597215 NECAP1Q8NC96 275 aa11.16□□□□□ -0.62
VRK3-213ENST00000597215 USMG5Q96IX5 58 aa11.16□□□□□ -0.62
VRK3-213ENST00000597215 F11RQ9Y624 299 aaKnown RBP11.16□□□□□ -0.62
VRK3-213ENST00000597215 CEBPZOSA8MTT3 80 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 SNRPGP15A8MWD9 76 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 PITX3O75364 302 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 TSPAN15O95858 294 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 LGALS1P09382 135 aaKnown RBP11.15□□□□□ -0.62
VRK3-213ENST00000597215 RUNX1Q01196 453 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 TNFRSF9Q07011 255 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 RGS21Q2M5E4 152 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 KLK9Q2XQG4 91 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 C8orf86Q6ZUL3 223 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 UXS1Q8NBZ7 420 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 ZNF114Q8NC26 417 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 OR1L6Q8NGR2 347 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 FANCD2OSQ96PS1 177 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 GNB4Q9HAV0 340 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 THYN1Q9P016 225 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 HSPB7Q9UBY9 170 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 KLK9Q9UKQ9 250 aa11.15□□□□□ -0.62
VRK3-213ENST00000597215 IGLV11-55A0A075B6I3 123 aa11.14□□□□□ -0.63
VRK3-213ENST00000597215 FAM90A26D6RGX4 464 aa11.14□□□□□ -0.63
VRK3-213ENST00000597215 OR2J3O76001 311 aa11.14□□□□□ -0.63
VRK3-213ENST00000597215 NXPH3O95157 252 aa11.14□□□□□ -0.63
VRK3-213ENST00000597215 IGHV3-11P01762 117 aa11.14□□□□□ -0.63
VRK3-213ENST00000597215 SNCAP37840 140 aa11.14□□□□□ -0.63
VRK3-213ENST00000597215 DEFA5Q01523 94 aa11.14□□□□□ -0.63
VRK3-213ENST00000597215 OR1P1Q8NH06 330 aa11.14□□□□□ -0.63
VRK3-213ENST00000597215 OR5B12Q96R08 314 aa11.14□□□□□ -0.63
VRK3-213ENST00000597215 P2RX4Q99571 388 aa11.14□□□□□ -0.63
VRK3-213ENST00000597215 FBXL7Q9UJT9 491 aa11.14□□□□□ -0.63
VRK3-213ENST00000597215 MPTX1A8MV57 137 aa11.13□□□□□ -0.63
VRK3-213ENST00000597215 I3L521 148 aa11.13□□□□□ -0.63
VRK3-213ENST00000597215 PF4P02776 101 aa11.13□□□□□ -0.63
VRK3-213ENST00000597215 SUB1P53999 127 aaKnown RBP eCLIP11.13□□□□□ -0.63
VRK3-213ENST00000597215 ATP5G2Q06055 141 aa11.13□□□□□ -0.63
VRK3-213ENST00000597215 C15orf32Q32M92 178 aa11.13□□□□□ -0.63
VRK3-213ENST00000597215 SLC25A24Q6NUK1 477 aa11.13□□□□□ -0.63
VRK3-213ENST00000597215 HIPK2Q9H2X6 1198 aa11.13□□□□□ -0.63
VRK3-213ENST00000597215 HEYLQ9NQ87 328 aaPredicted RBP11.13□□□□□ -0.63
VRK3-213ENST00000597215 CCL24O00175 119 aa11.12□□□□□ -0.63
VRK3-213ENST00000597215 CCSO14618 274 aa11.12□□□□□ -0.63
VRK3-213ENST00000597215 MED6O75586 246 aa11.12□□□□□ -0.63
VRK3-213ENST00000597215 HTR2BP41595 481 aa11.12□□□□□ -0.63
VRK3-213ENST00000597215 EXOSC2Q13868 293 aaKnown RBP11.12□□□□□ -0.63
VRK3-213ENST00000597215 IAH1Q2TAA2 248 aaPredicted RBP11.12□□□□□ -0.63
VRK3-213ENST00000597215 DEFB136Q30KP8 78 aa11.12□□□□□ -0.63
VRK3-213ENST00000597215 FAM209BQ5JX69 171 aa11.12□□□□□ -0.63
VRK3-213ENST00000597215 PRR31Q5SQ13 230 aa11.12□□□□□ -0.63
VRK3-213ENST00000597215 DTD1Q8TEA8 209 aa11.12□□□□□ -0.63
VRK3-213ENST00000597215 RBKSQ9H477 322 aa11.12□□□□□ -0.63
VRK3-213ENST00000597215 DMRT1Q9Y5R6 373 aa11.12□□□□□ -0.63
VRK3-213ENST00000597215 C5orf51A6NDU8 294 aa11.11□□□□□ -0.63
VRK3-213ENST00000597215 FAM25EA8MYX2 175 aa11.11□□□□□ -0.63
VRK3-213ENST00000597215 NDUFB8O95169 186 aa11.11□□□□□ -0.63
VRK3-213ENST00000597215 RNASE2P10153 161 aaKnown RBP11.11□□□□□ -0.63
VRK3-213ENST00000597215 MYCNOSP40205 109 aa11.11□□□□□ -0.63
VRK3-213ENST00000597215 MFAP2P55001 183 aa11.11□□□□□ -0.63
VRK3-213ENST00000597215 TATDN3Q17R31 274 aa11.11□□□□□ -0.63
VRK3-213ENST00000597215 ZNF343Q6P1L6 599 aa11.11□□□□□ -0.63
VRK3-213ENST00000597215 ETV3LQ6ZN32 361 aa11.11□□□□□ -0.63
VRK3-213ENST00000597215 ZBTB8BQ8NAP8 495 aaPredicted RBP11.11□□□□□ -0.63
VRK3-213ENST00000597215 OR4D5Q8NGN0 318 aa11.11□□□□□ -0.63
VRK3-213ENST00000597215 DPF1Q92782 380 aa11.11□□□□□ -0.63
VRK3-213ENST00000597215 EEF1AKMT3Q96AZ1 226 aa11.11□□□□□ -0.63
VRK3-213ENST00000597215 RAX2Q96IS3 184 aa11.11□□□□□ -0.63
VRK3-213ENST00000597215 OR10C1Q96KK4 312 aa11.11□□□□□ -0.63
VRK3-213ENST00000597215 CXorf58Q96LI9 332 aa11.11□□□□□ -0.63
VRK3-213ENST00000597215 WNK1Q9H4A3 2382 aa11.11□□□□□ -0.63
VRK3-213ENST00000597215 CORTO00230 105 aa11.1□□□□□ -0.63
VRK3-213ENST00000597215 SYNGR2O43760 224 aa11.1□□□□□ -0.63
VRK3-213ENST00000597215 HSPB1P04792 205 aaKnown RBP11.1□□□□□ -0.63
VRK3-213ENST00000597215 NKX2-1P43699 371 aaPredicted RBP11.1□□□□□ -0.63
VRK3-213ENST00000597215 ZNF616Q08AN1 781 aa11.1□□□□□ -0.63
VRK3-213ENST00000597215 BSXQ3C1V8 233 aa11.1□□□□□ -0.63
VRK3-213ENST00000597215 GSG1LQ6UXU4 331 aa11.1□□□□□ -0.63
VRK3-213ENST00000597215 NOXA1Q86UR1 476 aa11.1□□□□□ -0.63
VRK3-213ENST00000597215 SLC24A4Q8NFF2 622 aa11.1□□□□□ -0.63
VRK3-213ENST00000597215 OR11H1Q8NG94 326 aa11.1□□□□□ -0.63
VRK3-213ENST00000597215 OR1N2Q8NGR9 330 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms