RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 C15orf32Q32M92 178 aa11.44□□□□□ -0.58
LIG1-214ENST00000597146 SLC38A6Q8IZM9 456 aa11.44□□□□□ -0.58
LIG1-214ENST00000597146 OR52I2Q8NH67 350 aa11.44□□□□□ -0.58
LIG1-214ENST00000597146 THYN1Q9P016 225 aa11.44□□□□□ -0.58
LIG1-214ENST00000597146 KLK11Q9UBX7 282 aa11.44□□□□□ -0.58
LIG1-214ENST00000597146 MLXQ9UH92 298 aa11.44□□□□□ -0.58
LIG1-214ENST00000597146 TRAV3A0A0B4J244 114 aa11.43□□□□□ -0.58
LIG1-214ENST00000597146 CCDC160A6NGH7 325 aa11.43□□□□□ -0.58
LIG1-214ENST00000597146 RTL8CO15255 209 aa11.43□□□□□ -0.58
LIG1-214ENST00000597146 SERPINE2P07093 398 aa11.43□□□□□ -0.58
LIG1-214ENST00000597146 MYOD1P15172 320 aa11.43□□□□□ -0.58
LIG1-214ENST00000597146 AREGP15514 252 aa11.43□□□□□ -0.58
LIG1-214ENST00000597146 G6PCP35575 357 aa11.43□□□□□ -0.58
LIG1-214ENST00000597146 SPCS2Q15005 226 aa11.43□□□□□ -0.58
LIG1-214ENST00000597146 ZNF57Q68EA5 555 aaPredicted RBP11.43□□□□□ -0.58
LIG1-214ENST00000597146 TBC1D26Q86UD7 250 aa11.43□□□□□ -0.58
LIG1-214ENST00000597146 OR1L8Q8NGR8 309 aa11.43□□□□□ -0.58
LIG1-214ENST00000597146 C2CD4CQ8TF44 421 aa11.43□□□□□ -0.58
LIG1-214ENST00000597146 EEF1AKMT3Q96AZ1 226 aa11.43□□□□□ -0.58
LIG1-214ENST00000597146 DIRAS2Q96HU8 199 aa11.43□□□□□ -0.58
LIG1-214ENST00000597146 FKBP11Q9NYL4 201 aa11.43□□□□□ -0.58
LIG1-214ENST00000597146 APLNQ9ULZ1 77 aa11.43□□□□□ -0.58
LIG1-214ENST00000597146 TRBV9A0A0B4J1U6 114 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 MARCH11A6NNE9 402 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 TEX22C9J3V5 150 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 CTDSP2O14595 271 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 CD3DP04234 171 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 IFNA4P05014 189 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 FCGR2BP31994 310 aaPredicted RBP11.42□□□□□ -0.58
LIG1-214ENST00000597146 UCP3P55916 312 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 OR2B8PP59922 312 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 IL18Q14116 193 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 POU2AF1Q16633 256 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 SCGB2B2Q4G0G5 96 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 SLC25A24Q6NUK1 477 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 H2BFWTQ7Z2G1 175 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 OR4A16Q8NH70 328 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 ZFAND1Q8TCF1 268 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 ABHD1Q96SE0 405 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 QTRT1Q9BXR0 403 aaKnown RBP11.42□□□□□ -0.58
LIG1-214ENST00000597146 C6orf62Q9GZU0 229 aaPredicted RBP11.42□□□□□ -0.58
LIG1-214ENST00000597146 FXYD6Q9H0Q3 95 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 MTFP1Q9UDX5 166 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 UBQLN2Q9UHD9 624 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 OR51B2Q9Y5P1 312 aa11.42□□□□□ -0.58
LIG1-214ENST00000597146 APOBP04114 4563 aaKnown RBP11.41□□□□□ -0.58
LIG1-214ENST00000597146 LRP1BQ9NZR2 4599 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.41□□□□□ -0.58
LIG1-214ENST00000597146 TEX50A0A1B0GTY4 177 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 ZNF320A2RRD8 509 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 E7EUB6 86 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 GGCTO75223 188 aaKnown RBP11.41□□□□□ -0.58
LIG1-214ENST00000597146 RAB3DO95716 219 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 IGHV3-23P01764 117 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 OR13C7P0DN81 318 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 TBPP20226 339 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 CBLN1P23435 193 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 TAS2R19P59542 299 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 MRPS10P82664 201 aaKnown RBP11.41□□□□□ -0.58
LIG1-214ENST00000597146 FAM106AQ4KMX7 169 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 CLEC19AQ6UXS0 136 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 HSD17B13Q7Z5P4 300 aaPredicted RBP11.41□□□□□ -0.58
LIG1-214ENST00000597146 TMEM229BQ8NBD8 167 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 C11orf45Q8TAV5 145 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 CXorf58Q96LI9 332 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 TMEM56Q96MV1 263 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 TSC22D3Q99576 134 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 BCL7BQ9BQE9 202 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 SRSF8Q9BRL6 282 aaKnown RBP11.41□□□□□ -0.58
LIG1-214ENST00000597146 RABL2AQ9UBK7 228 aaPredicted RBP11.41□□□□□ -0.58
LIG1-214ENST00000597146 PRNDQ9UKY0 176 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 RABL2BQ9UNT1 228 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 NSG2Q9Y328 171 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 DMRT1Q9Y5R6 373 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 S4R3C0 116 aa11.41□□□□□ -0.58
LIG1-214ENST00000597146 TMEM213A2RRL7 107 aa11.4□□□□□ -0.58
LIG1-214ENST00000597146 IGLL5B9A064 214 aa11.4□□□□□ -0.58
LIG1-214ENST00000597146 DISC1C4P0D8 188 aa11.4□□□□□ -0.58
LIG1-214ENST00000597146 GABARAPH6UMI1 98 aa11.4□□□□□ -0.58
LIG1-214ENST00000597146 UBE2CO00762 179 aa11.4□□□□□ -0.58
LIG1-214ENST00000597146 ATG12O94817 140 aa11.4□□□□□ -0.58
LIG1-214ENST00000597146 OR2C1O95371 312 aa11.4□□□□□ -0.58
LIG1-214ENST00000597146 CRYGCP07315 174 aa11.4□□□□□ -0.58
LIG1-214ENST00000597146 RPL35AP18077 110 aaKnown RBP11.4□□□□□ -0.58
LIG1-214ENST00000597146 ARL3P36405 182 aa11.4□□□□□ -0.58
LIG1-214ENST00000597146 THOC7Q6I9Y2 204 aaKnown RBP11.4□□□□□ -0.58
LIG1-214ENST00000597146 STEAP1BQ6NZ63 245 aa11.4□□□□□ -0.58
LIG1-214ENST00000597146 BTNL8Q6UX41 500 aa11.4□□□□□ -0.58
LIG1-214ENST00000597146 ARRDC1Q8N5I2 433 aa11.4□□□□□ -0.58
LIG1-214ENST00000597146 MFFQ9GZY8 342 aa11.4□□□□□ -0.58
LIG1-214ENST00000597146 COPZ2Q9P299 210 aa11.4□□□□□ -0.58
LIG1-214ENST00000597146 TRBV7-1A0A0A6YYK4 115 aa11.39□□□□□ -0.59
LIG1-214ENST00000597146 TCTAP57738 103 aa11.39□□□□□ -0.59
LIG1-214ENST00000597146 ANKRD55Q3KP44 614 aa11.39□□□□□ -0.59
LIG1-214ENST00000597146 ZNF585BQ52M93 769 aa11.39□□□□□ -0.59
LIG1-214ENST00000597146 C19orf35Q6ZS72 473 aa11.39□□□□□ -0.59
LIG1-214ENST00000597146 STPG3Q8N7X2 389 aa11.39□□□□□ -0.59
LIG1-214ENST00000597146 CCDC71LQ8N9Z2 235 aa11.39□□□□□ -0.59
LIG1-214ENST00000597146 OR10W1Q8NGF6 305 aa11.39□□□□□ -0.59
LIG1-214ENST00000597146 TERB2Q8NHR7 220 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms