RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 STPG3Q8N7X2 389 aa11.87□□□□□ -0.51
LIM2-202ENST00000596399 LSM10Q969L4 123 aaKnown RBP11.87□□□□□ -0.51
LIM2-202ENST00000596399 DGCR14Q96DF8 476 aaKnown RBP11.87□□□□□ -0.51
LIM2-202ENST00000596399 IGKV3-7A0A075B6H7 116 aa11.86□□□□□ -0.51
LIM2-202ENST00000596399 IGHV3OR16-13A0A075B7E8 117 aa11.86□□□□□ -0.51
LIM2-202ENST00000596399 IGHV3-74A0A0B4J1X5 117 aa11.86□□□□□ -0.51
LIM2-202ENST00000596399 CYB5BO43169 146 aa11.86□□□□□ -0.51
LIM2-202ENST00000596399 PHLDA2Q53GA4 152 aa11.86□□□□□ -0.51
LIM2-202ENST00000596399 THOC7Q6I9Y2 204 aaKnown RBP11.86□□□□□ -0.51
LIM2-202ENST00000596399 SPSB3Q6PJ21 355 aa11.86□□□□□ -0.51
LIM2-202ENST00000596399 YTHDF1Q9BYJ9 559 aaKnown RBP11.86□□□□□ -0.51
LIM2-202ENST00000596399 MAP6D1Q9H9H5 199 aa11.86□□□□□ -0.51
LIM2-202ENST00000596399 SMPXQ9UHP9 88 aa11.86□□□□□ -0.51
LIM2-202ENST00000596399 ANAPC10Q9UM13 185 aa11.86□□□□□ -0.51
LIM2-202ENST00000596399 OR4C46A6NHA9 309 aa11.85□□□□□ -0.51
LIM2-202ENST00000596399 K7EMT4 169 aa11.85□□□□□ -0.51
LIM2-202ENST00000596399 UBE2CO00762 179 aa11.85□□□□□ -0.51
LIM2-202ENST00000596399 TAS2R20P59543 309 aa11.85□□□□□ -0.51
LIM2-202ENST00000596399 HSD17B13Q7Z5P4 300 aaPredicted RBP11.85□□□□□ -0.51
LIM2-202ENST00000596399 LYSMD2Q8IV50 215 aa11.85□□□□□ -0.51
LIM2-202ENST00000596399 S100A16Q96FQ6 103 aaKnown RBP11.85□□□□□ -0.51
LIM2-202ENST00000596399 KIR2DL5BA0A0G2JN68 375 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 KIR2DL5BA0A0G2JPC4 375 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 IGHV7-4-1A0A0J9YVY3 117 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 C15orf62A8K5M9 175 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 CHEK1O14757 476 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 DEDDO75618 318 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 SNAPC5O75971 98 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 YIF1AO95070 293 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 HLA-DMAP28067 261 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 RPS19P39019 145 aaKnown RBP11.84□□□□□ -0.51
LIM2-202ENST00000596399 LSM3P62310 102 aaKnown RBP11.84□□□□□ -0.51
LIM2-202ENST00000596399 KIR2DL5AQ8N109 375 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 SAMD12Q8N8I0 201 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 TSPAN14Q8NG11 270 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 OR5H2Q8NGV7 314 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 KIR2DL5BQ8NHK3 375 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 SLC25A46Q96AG3 418 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 MISP3Q96FF7 219 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 GALNT14Q96FL9 552 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 RHPN1-AS1Q9BWJ2 59 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 Q9H521 79 aa11.84□□□□□ -0.51
LIM2-202ENST00000596399 I3L2K1 104 aa11.83□□□□□ -0.52
LIM2-202ENST00000596399 GPR31O00270 319 aa11.83□□□□□ -0.52
LIM2-202ENST00000596399 IGKV1-39P01597 117 aa11.83□□□□□ -0.52
LIM2-202ENST00000596399 IGKV1D-39P04432 117 aa11.83□□□□□ -0.52
LIM2-202ENST00000596399 NAT1P18440 290 aa11.83□□□□□ -0.52
LIM2-202ENST00000596399 HRH1P35367 487 aa11.83□□□□□ -0.52
LIM2-202ENST00000596399 UBE2NLQ5JXB2 153 aa11.83□□□□□ -0.52
LIM2-202ENST00000596399 TMEM69Q5SWH9 247 aa11.83□□□□□ -0.52
LIM2-202ENST00000596399 GBGT1Q8N5D6 347 aa11.83□□□□□ -0.52
LIM2-202ENST00000596399 TMEM116Q8NCL8 245 aa11.83□□□□□ -0.52
LIM2-202ENST00000596399 TMEM14BQ9NUH8 114 aa11.83□□□□□ -0.52
LIM2-202ENST00000596399 PRNDQ9UKY0 176 aa11.83□□□□□ -0.52
LIM2-202ENST00000596399 C15orf61A6NNL5 157 aa11.82□□□□□ -0.52
LIM2-202ENST00000596399 CMTM1Q8IZ96 169 aa11.82□□□□□ -0.52
LIM2-202ENST00000596399 LILRB2Q8N423 598 aa11.82□□□□□ -0.52
LIM2-202ENST00000596399 OR6F1Q8NGZ6 308 aa11.82□□□□□ -0.52
LIM2-202ENST00000596399 OR1P1Q8NH06 330 aa11.82□□□□□ -0.52
LIM2-202ENST00000596399 PHLDA1Q8WV24 401 aaPredicted RBP11.82□□□□□ -0.52
LIM2-202ENST00000596399 BORCS5Q969J3 196 aa11.82□□□□□ -0.52
LIM2-202ENST00000596399 TMEM56Q96MV1 263 aa11.82□□□□□ -0.52
LIM2-202ENST00000596399 KRTAP17-1Q9BYP8 105 aa11.82□□□□□ -0.52
LIM2-202ENST00000596399 VPS13DQ5THJ4 4388 aa11.82□□□□□ -0.52
LIM2-202ENST00000596399 HERC2O95714 4834 aa11.81□□□□□ -0.52
LIM2-202ENST00000596399 APOHP02749 345 aaPredicted RBP11.81□□□□□ -0.52
LIM2-202ENST00000596399 PRSS3P35030 304 aa11.81□□□□□ -0.52
LIM2-202ENST00000596399 NANOS2P60321 138 aaKnown RBP11.81□□□□□ -0.52
LIM2-202ENST00000596399 IZUMO4Q1ZYL8 232 aa11.81□□□□□ -0.52
LIM2-202ENST00000596399 SPINK9Q5DT21 86 aa11.81□□□□□ -0.52
LIM2-202ENST00000596399 TBC1D26Q86UD7 250 aa11.81□□□□□ -0.52
LIM2-202ENST00000596399 PINX1Q96BK5 328 aaKnown RBP11.81□□□□□ -0.52
LIM2-202ENST00000596399 SEC22AQ96IW7 307 aa11.81□□□□□ -0.52
LIM2-202ENST00000596399 OR10C1Q96KK4 312 aa11.81□□□□□ -0.52
LIM2-202ENST00000596399 ATP6V0BQ99437 205 aa11.81□□□□□ -0.52
LIM2-202ENST00000596399 CSTL1Q9H114 145 aa11.81□□□□□ -0.52
LIM2-202ENST00000596399 KLK5Q9Y337 293 aaPredicted RBP11.81□□□□□ -0.52
LIM2-202ENST00000596399 IGHV3-66A0A0C4DH42 116 aa11.8□□□□□ -0.52
LIM2-202ENST00000596399 DEFB4AO15263 64 aa11.8□□□□□ -0.52
LIM2-202ENST00000596399 NUPL2O15504 423 aaKnown RBP11.8□□□□□ -0.52
LIM2-202ENST00000596399 MT-CO2P00403 227 aa11.8□□□□□ -0.52
LIM2-202ENST00000596399 EIF4EP06730 217 aaKnown RBP11.8□□□□□ -0.52
LIM2-202ENST00000596399 TAS2R46P59540 309 aa11.8□□□□□ -0.52
LIM2-202ENST00000596399 FAM90A2PQ658T7 463 aa11.8□□□□□ -0.52
LIM2-202ENST00000596399 CADM3Q8N126 398 aa11.8□□□□□ -0.52
LIM2-202ENST00000596399 MRGPRFQ96AM1 343 aa11.8□□□□□ -0.52
LIM2-202ENST00000596399 RARRES2Q99969 163 aa11.8□□□□□ -0.52
LIM2-202ENST00000596399 NXF2Q9GZY0 626 aaKnown RBP11.8□□□□□ -0.52
LIM2-202ENST00000596399 FKBP11Q9NYL4 201 aa11.8□□□□□ -0.52
LIM2-202ENST00000596399 TRAV14DV4A0A0A6YYC5 116 aa11.79□□□□□ -0.52
LIM2-202ENST00000596399 MPTX1A8MV57 137 aa11.79□□□□□ -0.52
LIM2-202ENST00000596399 ATF4P18848 351 aaPredicted RBP11.79□□□□□ -0.52
LIM2-202ENST00000596399 MFAP4P55083 255 aa11.79□□□□□ -0.52
LIM2-202ENST00000596399 RELQ04864 619 aaPredicted RBP11.79□□□□□ -0.52
LIM2-202ENST00000596399 OR4A16Q8NH70 328 aa11.79□□□□□ -0.52
LIM2-202ENST00000596399 GPX8Q8TED1 209 aa11.79□□□□□ -0.52
LIM2-202ENST00000596399 ST8SIA2Q92186 375 aa11.79□□□□□ -0.52
LIM2-202ENST00000596399 YIPF6Q96EC8 236 aa11.79□□□□□ -0.52
LIM2-202ENST00000596399 TSC22D3Q99576 134 aa11.79□□□□□ -0.52
LIM2-202ENST00000596399 TSPAN5P62079 268 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms