RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 GP9P14770 177 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 SPNP16150 400 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 AKR1C4P17516 323 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 BTCP35070 178 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 INPP1P49441 399 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 CCR6P51684 374 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 AKR1C2P52895 323 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 TMEM187Q14656 261 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 KLK9Q2XQG4 91 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 ZNF343Q6P1L6 599 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 ACSM6Q6P461 480 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 TMED4Q7Z7H5 227 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 FAM223AQ8IWN6 122 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 SELENOHQ8IZQ5 122 aaKnown RBP12.18□□□□□ -0.46
USHBP1-205ENST00000595993 OR5B3Q8NH48 314 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 GALNT14Q96FL9 552 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 USMG5Q96IX5 58 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 SCGB3A2Q96PL1 93 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 TM2D3Q9BRN9 247 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 BATF3Q9NR55 127 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 PTTG2Q9NZH5 202 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 KLK9Q9UKQ9 250 aa12.18□□□□□ -0.46
USHBP1-205ENST00000595993 IGLV11-55A0A075B6I3 123 aa12.17□□□□□ -0.46
USHBP1-205ENST00000595993 A0A0B4J293 547 aa12.17□□□□□ -0.46
USHBP1-205ENST00000595993 SAP30O75446 220 aa12.17□□□□□ -0.46
USHBP1-205ENST00000595993 NDUFB8O95169 186 aa12.17□□□□□ -0.46
USHBP1-205ENST00000595993 HSPB1P04792 205 aaKnown RBP12.17□□□□□ -0.46
USHBP1-205ENST00000595993 DHODHQ02127 395 aa12.17□□□□□ -0.46
USHBP1-205ENST00000595993 EXOSC2Q13868 293 aaKnown RBP12.17□□□□□ -0.46
USHBP1-205ENST00000595993 TMEM268Q5VZI3 342 aa12.17□□□□□ -0.46
USHBP1-205ENST00000595993 THOC7Q6I9Y2 204 aaKnown RBP12.17□□□□□ -0.46
USHBP1-205ENST00000595993 Q6ZRM9 215 aa12.17□□□□□ -0.46
USHBP1-205ENST00000595993 LINC00299Q6ZSB3 139 aa12.17□□□□□ -0.46
USHBP1-205ENST00000595993 SGPP2Q8IWX5 399 aa12.17□□□□□ -0.46
USHBP1-205ENST00000595993 NECAP1Q8NC96 275 aa12.17□□□□□ -0.46
USHBP1-205ENST00000595993 OR4A16Q8NH70 328 aa12.17□□□□□ -0.46
USHBP1-205ENST00000595993 LSM10Q969L4 123 aaKnown RBP12.17□□□□□ -0.46
USHBP1-205ENST00000595993 EDA2RQ9HAV5 297 aa12.17□□□□□ -0.46
USHBP1-205ENST00000595993 FKBP11Q9NYL4 201 aa12.17□□□□□ -0.46
USHBP1-205ENST00000595993 FBXL7Q9UJT9 491 aa12.17□□□□□ -0.46
USHBP1-205ENST00000595993 HYDINQ4G0P3 5121 aa12.17□□□□□ -0.46
USHBP1-205ENST00000595993 OR13C7P0DN81 318 aa12.16□□□□□ -0.46
USHBP1-205ENST00000595993 MFAP2P55001 183 aa12.16□□□□□ -0.46
USHBP1-205ENST00000595993 PRCDQ00LT1 54 aa12.16□□□□□ -0.46
USHBP1-205ENST00000595993 ATP5G2Q06055 141 aa12.16□□□□□ -0.46
USHBP1-205ENST00000595993 C15orf32Q32M92 178 aa12.16□□□□□ -0.46
USHBP1-205ENST00000595993 RBPMSQ93062 196 aaKnown RBP12.16□□□□□ -0.46
USHBP1-205ENST00000595993 TMEM56Q96MV1 263 aa12.16□□□□□ -0.46
USHBP1-205ENST00000595993 SLC25A21Q9BQT8 299 aaPredicted RBP12.16□□□□□ -0.46
USHBP1-205ENST00000595993 ZMAT4Q9H898 229 aa12.16□□□□□ -0.46
USHBP1-205ENST00000595993 S4R3C0 116 aa12.16□□□□□ -0.46
USHBP1-205ENST00000595993 TMEM56-RWDD3S4R434 201 aa12.16□□□□□ -0.46
USHBP1-205ENST00000595993 NAP1L6A6NFF2 107 aa12.15□□□□□ -0.46
USHBP1-205ENST00000595993 A8MZ25 164 aa12.15□□□□□ -0.46
USHBP1-205ENST00000595993 PLA2G10O15496 165 aa12.15□□□□□ -0.46
USHBP1-205ENST00000595993 ST8SIA3O43173 380 aa12.15□□□□□ -0.46
USHBP1-205ENST00000595993 ATG12O94817 140 aa12.15□□□□□ -0.46
USHBP1-205ENST00000595993 NDUFB6O95139 128 aa12.15□□□□□ -0.46
USHBP1-205ENST00000595993 HSPE1P61604 102 aaKnown RBP12.15□□□□□ -0.46
USHBP1-205ENST00000595993 PLECQ15149 4684 aaKnown RBP12.15□□□□□ -0.46
USHBP1-205ENST00000595993 RBMS2Q15434 407 aaKnown RBP12.15□□□□□ -0.46
USHBP1-205ENST00000595993 SPINK9Q5DT21 86 aa12.15□□□□□ -0.46
USHBP1-205ENST00000595993 HSD17B13Q7Z5P4 300 aaPredicted RBP12.15□□□□□ -0.46
USHBP1-205ENST00000595993 Q8N1Y9 231 aa12.15□□□□□ -0.46
USHBP1-205ENST00000595993 SLC35G3Q8N808 338 aa12.15□□□□□ -0.46
USHBP1-205ENST00000595993 RNASE11Q8TAA1 199 aaKnown RBP12.15□□□□□ -0.46
USHBP1-205ENST00000595993 GPR146Q96CH1 333 aa12.15□□□□□ -0.46
USHBP1-205ENST00000595993 GAR1Q9NY12 217 aaKnown RBP12.15□□□□□ -0.46
USHBP1-205ENST00000595993 PEF1Q9UBV8 284 aaKnown RBP12.15□□□□□ -0.46
USHBP1-205ENST00000595993 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.14□□□□□ -0.47
USHBP1-205ENST00000595993 MFSD2BA6NFX1 497 aa12.14□□□□□ -0.47
USHBP1-205ENST00000595993 DHFRP00374 187 aa12.14□□□□□ -0.47
USHBP1-205ENST00000595993 IGHV3-23P01764 117 aa12.14□□□□□ -0.47
USHBP1-205ENST00000595993 DEFA4P12838 97 aa12.14□□□□□ -0.47
USHBP1-205ENST00000595993 HIST1H1BP16401 226 aaKnown RBP12.14□□□□□ -0.47
USHBP1-205ENST00000595993 MECP2P51608 486 aaKnown RBP12.14□□□□□ -0.47
USHBP1-205ENST00000595993 IL22RA2Q969J5 263 aa12.14□□□□□ -0.47
USHBP1-205ENST00000595993 RRNAD1Q96FB5 475 aaKnown RBP12.14□□□□□ -0.47
USHBP1-205ENST00000595993 CCDC140Q96MF4 163 aa12.14□□□□□ -0.47
USHBP1-205ENST00000595993 RANGRFQ9HD47 186 aaPredicted RBP12.14□□□□□ -0.47
USHBP1-205ENST00000595993 C19orf73Q9NVV2 129 aa12.14□□□□□ -0.47
USHBP1-205ENST00000595993 FLVCR2Q9UPI3 526 aa12.14□□□□□ -0.47
USHBP1-205ENST00000595993 KCNIP3Q9Y2W7 256 aa12.14□□□□□ -0.47
USHBP1-205ENST00000595993 F11RQ9Y624 299 aaKnown RBP12.14□□□□□ -0.47
USHBP1-205ENST00000595993 BMPR1BO00238 502 aa12.13□□□□□ -0.47
USHBP1-205ENST00000595993 PPP1R1AQ13522 171 aa12.13□□□□□ -0.47
USHBP1-205ENST00000595993 ANKRD55Q3KP44 614 aa12.13□□□□□ -0.47
USHBP1-205ENST00000595993 TMEM128Q5BJH2 165 aa12.13□□□□□ -0.47
USHBP1-205ENST00000595993 FAM219AQ8IW50 185 aa12.13□□□□□ -0.47
USHBP1-205ENST00000595993 CENPSQ8N2Z9 138 aa12.13□□□□□ -0.47
USHBP1-205ENST00000595993 OR2C3Q8N628 320 aa12.13□□□□□ -0.47
USHBP1-205ENST00000595993 C7orf50Q9BRJ6 194 aaKnown RBP12.13□□□□□ -0.47
USHBP1-205ENST00000595993 CCDC32Q9BV29 185 aa12.13□□□□□ -0.47
USHBP1-205ENST00000595993 PALMDQ9NP74 551 aa12.13□□□□□ -0.47
USHBP1-205ENST00000595993 CACNG5Q9UF02 275 aa12.13□□□□□ -0.47
USHBP1-205ENST00000595993 PPP5D1E7EU14 171 aa12.12□□□□□ -0.47
USHBP1-205ENST00000595993 IGLV1-51P01701 117 aa12.12□□□□□ -0.47
USHBP1-205ENST00000595993 AARDQ4LEZ3 155 aa12.12□□□□□ -0.47
USHBP1-205ENST00000595993 NMSQ5H8A3 153 aa12.12□□□□□ -0.47
USHBP1-205ENST00000595993 LYZL2Q7Z4W2 148 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms