RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 A0A1W2PN81 502 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 IGLV1-47P01700 117 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 GNLYP22749 145 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 CHRNA7P36544 502 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 C11orf71Q6IPW1 123 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 C8orf46Q8TAG6 207 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 SLC45A2Q9UMX9 530 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 C5orf52A6NGY3 159 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 E7EUB6 86 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 SOD3P08294 240 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 LINC00869P0C866 280 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 RHOBP62745 196 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 RPL23P62829 140 aaKnown RBP15.91■□□□□ 0.14
CLIP3-206ENST00000593074 HLA-DRB5Q30154 266 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 MOB3BQ86TA1 216 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 LINC00518Q8N0U6 118 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 NEU4Q8WWR8 484 aaPredicted RBP15.91■□□□□ 0.14
CLIP3-206ENST00000593074 TXNDC17Q9BRA2 123 aa15.91■□□□□ 0.14
CLIP3-206ENST00000593074 ZNF430Q9H8G1 570 aaPredicted RBP15.91■□□□□ 0.14
CLIP3-206ENST00000593074 IGKV1OR2-108A0A075B7D4 117 aa15.9■□□□□ 0.14
CLIP3-206ENST00000593074 TGIF2-C20orf24A0A0A6YYL0 155 aa15.9■□□□□ 0.14
CLIP3-206ENST00000593074 CGB1A6NKQ9 187 aa15.9■□□□□ 0.14
CLIP3-206ENST00000593074 NPPCP23582 126 aa15.9■□□□□ 0.14
CLIP3-206ENST00000593074 UQCRFS1P47985 274 aa15.9■□□□□ 0.14
CLIP3-206ENST00000593074 SNRPEP62304 92 aaKnown RBP15.9■□□□□ 0.14
CLIP3-206ENST00000593074 GAMTQ14353 236 aa15.9■□□□□ 0.14
CLIP3-206ENST00000593074 ADIRFQ15847 76 aa15.9■□□□□ 0.14
CLIP3-206ENST00000593074 ITLN2Q8WWU7 325 aaPredicted RBP15.9■□□□□ 0.14
CLIP3-206ENST00000593074 FAM122AQ96E09 287 aa15.9■□□□□ 0.14
CLIP3-206ENST00000593074 SEPSECSQ9HD40 501 aaKnown RBP15.9■□□□□ 0.14
CLIP3-206ENST00000593074 RPS10P46783 165 aaKnown RBP15.9■□□□□ 0.14
CLIP3-206ENST00000593074 ATP5G3P48201 142 aa15.9■□□□□ 0.14
CLIP3-206ENST00000593074 ERHP84090 104 aaKnown RBP15.9■□□□□ 0.14
CLIP3-206ENST00000593074 CD69Q07108 199 aa15.9■□□□□ 0.14
CLIP3-206ENST00000593074 VMA21Q3ZAQ7 101 aa15.9■□□□□ 0.14
CLIP3-206ENST00000593074 MIOXQ9UGB7 285 aa15.9■□□□□ 0.14
CLIP3-206ENST00000593074 LY6HO94772 140 aa15.89■□□□□ 0.13
CLIP3-206ENST00000593074 S100A6P06703 90 aa15.89■□□□□ 0.13
CLIP3-206ENST00000593074 LGALS7P47929 136 aa15.89■□□□□ 0.13
CLIP3-206ENST00000593074 PRRX1P54821 245 aa15.89■□□□□ 0.13
CLIP3-206ENST00000593074 UBE2G2P60604 165 aa15.89■□□□□ 0.13
CLIP3-206ENST00000593074 BEND2Q8NDZ0 799 aa15.89■□□□□ 0.13
CLIP3-206ENST00000593074 OR8B3Q8NGG8 313 aa15.89■□□□□ 0.13
CLIP3-206ENST00000593074 NANPQ8TBE9 248 aa15.89■□□□□ 0.13
CLIP3-206ENST00000593074 CACNG8Q8WXS5 425 aa15.89■□□□□ 0.13
CLIP3-206ENST00000593074 TIMD4Q96H15 378 aa15.89■□□□□ 0.13
CLIP3-206ENST00000593074 OR8B2Q96RD0 313 aa15.89■□□□□ 0.13
CLIP3-206ENST00000593074 PPIAL4CA0A0B4J2A2 164 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 UBE2CO00762 179 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 VENTXO95231 258 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 IGHV2-5P01817 119 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 PPIAL4GP0DN37 164 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 AKR1D1P51857 326 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 MRGPRG-AS1Q2M3A8 158 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 CST9LP1Q5W188 147 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 SLC35E1Q96K37 410 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 SSX3Q99909 188 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 CLEC7AQ9BXN2 247 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 ABCA4P78363 2273 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 F6UZH7 168 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 SLC25A17O43808 307 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 GCHFRP30047 84 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 GPX4P36969 197 aaPredicted RBP15.88■□□□□ 0.13
CLIP3-206ENST00000593074 RPL35P42766 123 aaKnown RBP15.88■□□□□ 0.13
CLIP3-206ENST00000593074 WT1-ASQ06250 92 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 C10orf55Q5SWW7 151 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 SPATA31B1PQ5VZV4 182 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 OR51G1Q8NGK1 321 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 RITA1Q96K30 269 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 CACNA1AO00555 2505 aa15.88■□□□□ 0.13
CLIP3-206ENST00000593074 DLX1P56177 255 aa15.87■□□□□ 0.13
CLIP3-206ENST00000593074 GNB1P62873 340 aa15.87■□□□□ 0.13
CLIP3-206ENST00000593074 SLC16A13Q7RTY0 426 aa15.87■□□□□ 0.13
CLIP3-206ENST00000593074 DTX2Q86UW9 622 aa15.87■□□□□ 0.13
CLIP3-206ENST00000593074 TPSG1Q9NRR2 321 aa15.87■□□□□ 0.13
CLIP3-206ENST00000593074 METTL1Q9UBP6 276 aaKnown RBP15.87■□□□□ 0.13
CLIP3-206ENST00000593074 BUB1B-PAK6H3BSN5 160 aa15.87■□□□□ 0.13
CLIP3-206ENST00000593074 MALRD1Q5VYJ5 2156 aa15.86■□□□□ 0.13
CLIP3-206ENST00000593074 TRBV24-1A0A075B6N3 115 aa15.86■□□□□ 0.13
CLIP3-206ENST00000593074 OR10J1P30954 320 aa15.86■□□□□ 0.13
CLIP3-206ENST00000593074 MLANAQ16655 118 aa15.86■□□□□ 0.13
CLIP3-206ENST00000593074 PNKDQ8N490 385 aa15.86■□□□□ 0.13
CLIP3-206ENST00000593074 TEX45Q8NA69 505 aa15.86■□□□□ 0.13
CLIP3-206ENST00000593074 LY6G5BQ8NDX9 201 aa15.86■□□□□ 0.13
CLIP3-206ENST00000593074 RNASEH2CQ8TDP1 164 aaKnown RBP15.86■□□□□ 0.13
CLIP3-206ENST00000593074 DOK5Q9P104 306 aa15.86■□□□□ 0.13
CLIP3-206ENST00000593074 IGHV3-72A0A0B4J1Y9 119 aa15.85■□□□□ 0.13
CLIP3-206ENST00000593074 CLN5O75503 358 aa15.85■□□□□ 0.13
CLIP3-206ENST00000593074 C16orf82Q7Z2V1 217 aa15.85■□□□□ 0.13
CLIP3-206ENST00000593074 FUT9Q9Y231 359 aa15.85■□□□□ 0.13
CLIP3-206ENST00000593074 TPRP12270 2363 aaKnown RBP15.85■□□□□ 0.13
CLIP3-206ENST00000593074 IGHV1-3A0A0C4DH29 117 aa15.85■□□□□ 0.13
CLIP3-206ENST00000593074 OR4P4Q8NGL7 312 aa15.85■□□□□ 0.13
CLIP3-206ENST00000593074 FAM210BQ96KR6 192 aa15.85■□□□□ 0.13
CLIP3-206ENST00000593074 C19orf24Q9BVV8 132 aa15.85■□□□□ 0.13
CLIP3-206ENST00000593074 YTHDF2Q9Y5A9 579 aaKnown RBP15.85■□□□□ 0.13
CLIP3-206ENST00000593074 ITPR1Q14643 2758 aa15.84■□□□□ 0.13
CLIP3-206ENST00000593074 A0A1W2PPI3 338 aa15.84■□□□□ 0.13
CLIP3-206ENST00000593074 ENSAO43768 121 aaKnown RBP15.84■□□□□ 0.13
CLIP3-206ENST00000593074 NDUFB4O95168 129 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms