RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 FBXL7Q9UJT9 491 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 STARD9Q9P2P6 4700 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 LYSTQ99698 3801 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 DBX1A6NMT0 343 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 OR11H12B2RN74 326 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 DISC1C4P0D8 188 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 PPP5D1E7EU14 171 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 GSTZ1O43708 216 aaPredicted RBP7.82□□□□□ -1.16
VPS4B-207ENST00000591519 NDUFB8O95169 186 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 OR2C1O95371 312 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 HPRT1P00492 218 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 AKAIN1P0CW23 69 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 HIST1H1BP16401 226 aaKnown RBP7.82□□□□□ -1.16
VPS4B-207ENST00000591519 CTRB1P17538 263 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 TBPP20226 339 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 F2RP25116 425 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 PSMB6P28072 239 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 G6PCP35575 357 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 RPL27AP46776 148 aaKnown RBP7.82□□□□□ -1.16
VPS4B-207ENST00000591519 ERVK-16P61578 105 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 SSBP1Q04837 148 aaKnown RBP7.82□□□□□ -1.16
VPS4B-207ENST00000591519 MEF2DQ14814 521 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 CTRB2Q6GPI1 263 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 CCDC190Q86UF4 302 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 ARRDC1Q8N5I2 433 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 OR13C8Q8NGS7 320 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 OR4A5Q8NH83 315 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 PLEKHA3Q9HB20 300 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 RABL2AQ9UBK7 228 aaPredicted RBP7.82□□□□□ -1.16
VPS4B-207ENST00000591519 RABL2BQ9UNT1 228 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 V9GYH0 126 aa7.82□□□□□ -1.16
VPS4B-207ENST00000591519 ANKRD20A5PA0PJZ0 165 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 CGB1A6NKQ9 187 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 RBFOX2O43251 390 aaKnown RBP eCLIP7.81□□□□□ -1.16
VPS4B-207ENST00000591519 DHFRP00374 187 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 KRASP01116 189 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 HLA-AP01891 365 aaKnown RBP7.81□□□□□ -1.16
VPS4B-207ENST00000591519 FGF2P09038 288 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 AREGP15514 252 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 NQO2P16083 231 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 UCP3P55916 312 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 PIGPP57054 158 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 TAS2R31P59538 309 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 RPL8P62917 257 aaKnown RBP7.81□□□□□ -1.16
VPS4B-207ENST00000591519 ZNF79Q15937 498 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 FAM106AQ4KMX7 169 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 ZNF585BQ52M93 769 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 SPANXN2Q5MJ10 180 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 C19orf35Q6ZS72 473 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 LHFPL1Q86WI0 220 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 DEFB125Q8N687 156 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 OR51S1Q8NGJ8 323 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 TERB2Q8NHR7 220 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 CD300LFQ8TDQ1 290 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 DYNLRB2Q8TF09 96 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 CCDC140Q96MF4 163 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 TMEM140Q9NV12 185 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 BET1LQ9NYM9 111 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 NDUFA13Q9P0J0 144 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 COPZ2Q9P299 210 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 NSG2Q9Y328 171 aa7.81□□□□□ -1.16
VPS4B-207ENST00000591519 DNAH1Q9P2D7 4330 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 IGLV11-55A0A075B6I3 123 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 TRBV7-1A0A0A6YYK4 115 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 LINC00854A0A1B0GVQ3 168 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 A8MWP6 167 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 UPK2O00526 184 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 REG1AP05451 166 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 C8orf88P0DMB2 117 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 HLA-GP17693 338 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 EDN2P20800 178 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 ARL3P36405 182 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 OR2B8PP59922 312 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 POU2AF1Q16633 256 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 SP6Q3SY56 376 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 ZNF57Q68EA5 555 aaPredicted RBP7.8□□□□□ -1.16
VPS4B-207ENST00000591519 CLEC19AQ6UXS0 136 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 TOMM5Q8N4H5 51 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 ZFAND1Q8TCF1 268 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 MRGPRFQ96AM1 343 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 EEF1AKMT3Q96AZ1 226 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 CXorf58Q96LI9 332 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 SRSF8Q9BRL6 282 aaKnown RBP7.8□□□□□ -1.16
VPS4B-207ENST00000591519 HINT2Q9BX68 163 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 PLEKHA2Q9HB19 425 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 RETNQ9HD89 108 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 COMMD9Q9P000 198 aa7.8□□□□□ -1.16
VPS4B-207ENST00000591519 C14orf166Q9Y224 244 aaKnown RBP7.8□□□□□ -1.16
VPS4B-207ENST00000591519 TRAV25A0A0B4J276 109 aa7.79□□□□□ -1.16
VPS4B-207ENST00000591519 TMEM213A2RRL7 107 aa7.79□□□□□ -1.16
VPS4B-207ENST00000591519 MARCH11A6NNE9 402 aa7.79□□□□□ -1.16
VPS4B-207ENST00000591519 CLEC3BP05452 202 aa7.79□□□□□ -1.16
VPS4B-207ENST00000591519 SERPINE2P07093 398 aa7.79□□□□□ -1.16
VPS4B-207ENST00000591519 CTSDP07339 412 aaPredicted RBP7.79□□□□□ -1.16
VPS4B-207ENST00000591519 INPP1P49441 399 aa7.79□□□□□ -1.16
VPS4B-207ENST00000591519 GUCA2BQ16661 112 aa7.79□□□□□ -1.16
VPS4B-207ENST00000591519 SLC16A13Q7RTY0 426 aa7.79□□□□□ -1.16
VPS4B-207ENST00000591519 TMEM61Q8N0U2 210 aa7.79□□□□□ -1.16
VPS4B-207ENST00000591519 CCDC71LQ8N9Z2 235 aa7.79□□□□□ -1.16
VPS4B-207ENST00000591519 UXS1Q8NBZ7 420 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 191.9 ms