RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 ZNF506Q5JVG8 444 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 FFAR4Q5NUL3 377 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 OR9G1Q8NH87 305 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 ST6GALNAC6Q969X2 333 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 TMEM133Q9H2Q1 129 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 CFAP46Q8IYW2 2715 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 A0A1W2PPE2 198 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 MAP1LC3B2A6NCE7 125 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 M0R036 132 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 GNLYP22749 145 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 RPS10P46783 165 aaKnown RBP9.18□□□□□ -0.94
TPM4-213ENST00000591226 ZNF709Q8N972 641 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 SLC24A4Q8NFF2 622 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 OSR1Q8TAX0 266 aaPredicted RBP9.18□□□□□ -0.94
TPM4-213ENST00000591226 MAP1LC3BQ9GZQ8 125 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 SMDT1Q9H4I9 107 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 ENY2Q9NPA8 101 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 WDR83OSQ9Y284 106 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 LOC102723971A0A1B0GUV8 181 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 A0A1W2PPR1 153 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 KBTBD11O94819 623 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 FSTL3O95633 263 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 SRP19P09132 144 aaKnown RBP9.18□□□□□ -0.94
TPM4-213ENST00000591226 NPY1RP25929 384 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 FAM71F2Q6NXP2 309 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 ZNF664Q8N3J9 261 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 Q8N7P7 452 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 TMEM186Q96B77 213 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 SLC25A22Q9H936 323 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 BET1LQ9NYM9 111 aa9.18□□□□□ -0.94
TPM4-213ENST00000591226 ZFP92A6NM28 416 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 CA2P00918 260 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 LINC00614P0C842 121 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 ZNF137PP52743 207 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 CEBPGP53567 150 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 RAB11AP62491 216 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 PRCDQ00LT1 54 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 TMEM177Q53S58 311 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 SOHLH1Q5JUK2 328 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 ITLN2Q8WWU7 325 aaPredicted RBP9.17□□□□□ -0.94
TPM4-213ENST00000591226 FLYWCH2Q96CP2 140 aaKnown RBP9.17□□□□□ -0.94
TPM4-213ENST00000591226 ZNF257Q9Y2Q1 563 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 HMGB3O15347 200 aaKnown RBP9.17□□□□□ -0.94
TPM4-213ENST00000591226 RBX1P62877 108 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 C4orf17Q53FE4 359 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 RNF152Q8N8N0 203 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 OR8B3Q8NGG8 313 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 OR10G4Q8NGN3 311 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 OR10G9Q8NGN4 311 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 OR10G7Q8NGN6 311 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 LHX4Q969G2 390 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 MALSU1Q96EH3 234 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 OR8B2Q96RD0 313 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 PLEKHA3Q9HB20 300 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 SLC39A9Q9NUM3 307 aa9.17□□□□□ -0.94
TPM4-213ENST00000591226 PPIAL4CA0A0B4J2A2 164 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 TEX50A0A1B0GTY4 177 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 SEC14L6B5MCN3 397 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 C17orf112F2Z3M2 114 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 HSPB1P04792 205 aaKnown RBP9.16□□□□□ -0.94
TPM4-213ENST00000591226 PPIAL4GP0DN37 164 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 DEFA4P12838 97 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 HNF1AP20823 631 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 DLK1P80370 383 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 WDR25Q64LD2 544 aaPredicted RBP9.16□□□□□ -0.94
TPM4-213ENST00000591226 TREML4Q6UXN2 200 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 PDPNQ86YL7 162 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 CYB561D1Q8N8Q1 229 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 IGHV2-26A0A0B4J1V2 119 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 ACACBO00763 2458 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 PPP1R2P9O14990 202 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 BCL2P10415 239 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 ARSJQ5FYB0 599 aaPredicted RBP9.16□□□□□ -0.94
TPM4-213ENST00000591226 BEND2Q8NDZ0 799 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 OR4C13Q8NGP0 309 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 RNASE8Q8TDE3 154 aaKnown RBP9.16□□□□□ -0.94
TPM4-213ENST00000591226 C22orf15Q8WYQ4 148 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 NEIL1Q96FI4 390 aaPredicted RBP9.16□□□□□ -0.94
TPM4-213ENST00000591226 WASHC3Q9Y3C0 194 aa9.16□□□□□ -0.94
TPM4-213ENST00000591226 IGSF10Q6WRI0 2623 aa9.15□□□□□ -0.94
TPM4-213ENST00000591226 CTXND1A0A1B0GTU2 59 aa9.15□□□□□ -0.94
TPM4-213ENST00000591226 DTX2Q86UW9 622 aa9.15□□□□□ -0.94
TPM4-213ENST00000591226 HIST3H2BBQ8N257 126 aa9.15□□□□□ -0.94
TPM4-213ENST00000591226 NEU4Q8WWR8 484 aaPredicted RBP9.15□□□□□ -0.94
TPM4-213ENST00000591226 MGST2Q99735 147 aa9.15□□□□□ -0.94
TPM4-213ENST00000591226 PUS1Q9Y606 427 aaKnown RBP eCLIP9.15□□□□□ -0.94
TPM4-213ENST00000591226 IGHV3-72A0A0B4J1Y9 119 aa9.15□□□□□ -0.95
TPM4-213ENST00000591226 C22orf46C9J442 243 aa9.15□□□□□ -0.95
TPM4-213ENST00000591226 COX7A1P24310 79 aa9.15□□□□□ -0.95
TPM4-213ENST00000591226 IL3RAP26951 378 aa9.15□□□□□ -0.95
TPM4-213ENST00000591226 GCSAMLQ5JQS6 135 aa9.15□□□□□ -0.95
TPM4-213ENST00000591226 OR10W1Q8NGF6 305 aa9.15□□□□□ -0.95
TPM4-213ENST00000591226 OR5B3Q8NH48 314 aa9.15□□□□□ -0.95
TPM4-213ENST00000591226 C8orf46Q8TAG6 207 aa9.15□□□□□ -0.95
TPM4-213ENST00000591226 RAB1CQ92928 201 aa9.15□□□□□ -0.95
TPM4-213ENST00000591226 TIMD4Q96H15 378 aa9.15□□□□□ -0.95
TPM4-213ENST00000591226 C1orf159Q96HA4 380 aa9.15□□□□□ -0.95
TPM4-213ENST00000591226 NOL4LQ96MY1 436 aaPredicted RBP9.15□□□□□ -0.95
TPM4-213ENST00000591226 PCGF1Q9BSM1 259 aa9.15□□□□□ -0.95
TPM4-213ENST00000591226 TUBA4BQ9H853 241 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms