RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 K7EIM0 57 aa16.13■□□□□ 0.17
DDX39A-215ENST00000590696 K7EMT4 169 aa16.13■□□□□ 0.17
DDX39A-215ENST00000590696 UBE2CO00762 179 aa16.13■□□□□ 0.17
DDX39A-215ENST00000590696 NAT1P18440 290 aa16.13■□□□□ 0.17
DDX39A-215ENST00000590696 RPS19P39019 145 aaKnown RBP16.13■□□□□ 0.17
DDX39A-215ENST00000590696 TAS2R46P59540 309 aa16.13■□□□□ 0.17
DDX39A-215ENST00000590696 Q56UQ5 140 aa16.13■□□□□ 0.17
DDX39A-215ENST00000590696 SAMD12Q8N8I0 201 aa16.13■□□□□ 0.17
DDX39A-215ENST00000590696 OR6F1Q8NGZ6 308 aa16.13■□□□□ 0.17
DDX39A-215ENST00000590696 TMEM56Q96MV1 263 aa16.13■□□□□ 0.17
DDX39A-215ENST00000590696 PRNDQ9UKY0 176 aa16.13■□□□□ 0.17
DDX39A-215ENST00000590696 OR4C46A6NHA9 309 aa16.12■□□□□ 0.17
DDX39A-215ENST00000590696 GPR31O00270 319 aa16.12■□□□□ 0.17
DDX39A-215ENST00000590696 LY6G6CO95867 125 aa16.12■□□□□ 0.17
DDX39A-215ENST00000590696 CTSDP07339 412 aaPredicted RBP16.12■□□□□ 0.17
DDX39A-215ENST00000590696 STPG3Q8N7X2 389 aa16.12■□□□□ 0.17
DDX39A-215ENST00000590696 FKBP11Q9NYL4 201 aa16.12■□□□□ 0.17
DDX39A-215ENST00000590696 KIR2DL5BA0A0G2JN68 375 aa16.11■□□□□ 0.17
DDX39A-215ENST00000590696 KIR2DL5BA0A0G2JPC4 375 aa16.11■□□□□ 0.17
DDX39A-215ENST00000590696 NUPR2A6NF83 97 aa16.11■□□□□ 0.17
DDX39A-215ENST00000590696 DBX1A6NMT0 343 aa16.11■□□□□ 0.17
DDX39A-215ENST00000590696 RPL35AP18077 110 aaKnown RBP16.11■□□□□ 0.17
DDX39A-215ENST00000590696 PRSS3P35030 304 aa16.11■□□□□ 0.17
DDX39A-215ENST00000590696 KCTD21Q4G0X4 260 aa16.11■□□□□ 0.17
DDX39A-215ENST00000590696 LYSMD2Q8IV50 215 aa16.11■□□□□ 0.17
DDX39A-215ENST00000590696 KIR2DL5AQ8N109 375 aa16.11■□□□□ 0.17
DDX39A-215ENST00000590696 OR5B3Q8NH48 314 aa16.11■□□□□ 0.17
DDX39A-215ENST00000590696 KIR2DL5BQ8NHK3 375 aa16.11■□□□□ 0.17
DDX39A-215ENST00000590696 RNF183Q96D59 192 aa16.11■□□□□ 0.17
DDX39A-215ENST00000590696 C15orf62A8K5M9 175 aa16.1■□□□□ 0.17
DDX39A-215ENST00000590696 CTSGP08311 255 aa16.1■□□□□ 0.17
DDX39A-215ENST00000590696 HRH1P35367 487 aa16.1■□□□□ 0.17
DDX39A-215ENST00000590696 PHLDA2Q53GA4 152 aa16.1■□□□□ 0.17
DDX39A-215ENST00000590696 GALNT14Q96FL9 552 aa16.1■□□□□ 0.17
DDX39A-215ENST00000590696 TSC22D3Q99576 134 aa16.1■□□□□ 0.17
DDX39A-215ENST00000590696 TMEM14BQ9NUH8 114 aa16.1■□□□□ 0.17
DDX39A-215ENST00000590696 SMPXQ9UHP9 88 aa16.1■□□□□ 0.17
DDX39A-215ENST00000590696 C15orf61A6NNL5 157 aa16.09■□□□□ 0.17
DDX39A-215ENST00000590696 HLA-DMAP28067 261 aa16.09■□□□□ 0.17
DDX39A-215ENST00000590696 LSM3P62310 102 aaKnown RBP16.09■□□□□ 0.17
DDX39A-215ENST00000590696 CEMP1Q6PRD7 247 aaPredicted RBP16.09■□□□□ 0.17
DDX39A-215ENST00000590696 OR1P1Q8NH06 330 aa16.09■□□□□ 0.17
DDX39A-215ENST00000590696 ZNF414Q96IQ9 312 aa16.09■□□□□ 0.17
DDX39A-215ENST00000590696 MAP6D1Q9H9H5 199 aa16.09■□□□□ 0.17
DDX39A-215ENST00000590696 RELQ04864 619 aaPredicted RBP16.08■□□□□ 0.16
DDX39A-215ENST00000590696 APRG1Q8IVJ8 170 aa16.08■□□□□ 0.16
DDX39A-215ENST00000590696 SLC25A46Q96AG3 418 aa16.08■□□□□ 0.16
DDX39A-215ENST00000590696 MISP3Q96FF7 219 aa16.08■□□□□ 0.16
DDX39A-215ENST00000590696 RNF2Q99496 336 aa16.08■□□□□ 0.16
DDX39A-215ENST00000590696 RHPN1-AS1Q9BWJ2 59 aa16.08■□□□□ 0.16
DDX39A-215ENST00000590696 IGHV7-4-1A0A0J9YVY3 117 aa16.07■□□□□ 0.16
DDX39A-215ENST00000590696 CHEK1O14757 476 aa16.07■□□□□ 0.16
DDX39A-215ENST00000590696 NUPL2O15504 423 aaKnown RBP16.07■□□□□ 0.16
DDX39A-215ENST00000590696 S100GP29377 79 aa16.07■□□□□ 0.16
DDX39A-215ENST00000590696 MFAP4P55083 255 aa16.07■□□□□ 0.16
DDX39A-215ENST00000590696 TSPAN5P62079 268 aa16.07■□□□□ 0.16
DDX39A-215ENST00000590696 LPCAT3Q6P1A2 487 aa16.07■□□□□ 0.16
DDX39A-215ENST00000590696 TBC1D26Q86UD7 250 aa16.07■□□□□ 0.16
DDX39A-215ENST00000590696 TMEM116Q8NCL8 245 aa16.07■□□□□ 0.16
DDX39A-215ENST00000590696 FAM212BQ9NTI7 297 aaPredicted RBP16.07■□□□□ 0.16
DDX39A-215ENST00000590696 IGHV3-49A0A0A0MS15 119 aa16.06■□□□□ 0.16
DDX39A-215ENST00000590696 I3L2K1 104 aa16.06■□□□□ 0.16
DDX39A-215ENST00000590696 YIF1AO95070 293 aa16.06■□□□□ 0.16
DDX39A-215ENST00000590696 ATF4P18848 351 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-215ENST00000590696 FCGR2BP31994 310 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-215ENST00000590696 H2BFWTQ7Z2G1 175 aa16.06■□□□□ 0.16
DDX39A-215ENST00000590696 OR4A16Q8NH70 328 aa16.06■□□□□ 0.16
DDX39A-215ENST00000590696 GPX8Q8TED1 209 aa16.06■□□□□ 0.16
DDX39A-215ENST00000590696 YIPF6Q96EC8 236 aa16.06■□□□□ 0.16
DDX39A-215ENST00000590696 SEC22AQ96IW7 307 aa16.06■□□□□ 0.16
DDX39A-215ENST00000590696 C6orf62Q9GZU0 229 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-215ENST00000590696 IGKV1-39P01597 117 aa16.05■□□□□ 0.16
DDX39A-215ENST00000590696 IGKV1D-39P04432 117 aa16.05■□□□□ 0.16
DDX39A-215ENST00000590696 EIF4EP06730 217 aaKnown RBP16.05■□□□□ 0.16
DDX39A-215ENST00000590696 TFPI2P48307 235 aa16.05■□□□□ 0.16
DDX39A-215ENST00000590696 ZNF124Q15973 351 aa16.05■□□□□ 0.16
DDX39A-215ENST00000590696 TMEM217Q8N7C4 229 aa16.05■□□□□ 0.16
DDX39A-215ENST00000590696 OR10C1Q96KK4 312 aa16.05■□□□□ 0.16
DDX39A-215ENST00000590696 TXN2Q99757 166 aa16.05■□□□□ 0.16
DDX39A-215ENST00000590696 KLK5Q9Y337 293 aaPredicted RBP16.05■□□□□ 0.16
DDX39A-215ENST00000590696 IGKV3-7A0A075B6H7 116 aa16.04■□□□□ 0.16
DDX39A-215ENST00000590696 MT-CO2P00403 227 aa16.04■□□□□ 0.16
DDX39A-215ENST00000590696 IGHV3-48P01763 117 aa16.04■□□□□ 0.16
DDX39A-215ENST00000590696 NXF2Q9GZY0 626 aaKnown RBP16.04■□□□□ 0.16
DDX39A-215ENST00000590696 COMMD3Q9UBI1 195 aa16.04■□□□□ 0.16
DDX39A-215ENST00000590696 TRAV14DV4A0A0A6YYC5 116 aa16.03■□□□□ 0.16
DDX39A-215ENST00000590696 CMC4P56277 68 aaPredicted RBP16.03■□□□□ 0.16
DDX39A-215ENST00000590696 PRCDQ00LT1 54 aa16.03■□□□□ 0.16
DDX39A-215ENST00000590696 ZNF114Q8NC26 417 aa16.03■□□□□ 0.16
DDX39A-215ENST00000590696 MRGPRFQ96AM1 343 aa16.03■□□□□ 0.16
DDX39A-215ENST00000590696 PINX1Q96BK5 328 aaKnown RBP16.03■□□□□ 0.16
DDX39A-215ENST00000590696 CSTL1Q9H114 145 aa16.03■□□□□ 0.16
DDX39A-215ENST00000590696 IGHV3OR16-13A0A075B7E8 117 aa16.02■□□□□ 0.16
DDX39A-215ENST00000590696 IGHV3-74A0A0B4J1X5 117 aa16.02■□□□□ 0.16
DDX39A-215ENST00000590696 SMIM31A0A1B0GVY4 71 aa16.02■□□□□ 0.16
DDX39A-215ENST00000590696 UCP3P55916 312 aa16.02■□□□□ 0.16
DDX39A-215ENST00000590696 HSPE1P61604 102 aaKnown RBP16.02■□□□□ 0.16
DDX39A-215ENST00000590696 FAM90A2PQ658T7 463 aa16.02■□□□□ 0.16
DDX39A-215ENST00000590696 SNX29P2Q8IUI4 249 aa16.02■□□□□ 0.16
DDX39A-215ENST00000590696 GBGT1Q8N5D6 347 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms