RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	S100A5	P33763	92 aa		13.15	□□□□□ -0.3
MBD1-221	ENST00000589867	HSPE1	P61604	102 aa	Known RBP	13.15	□□□□□ -0.3
MBD1-221	ENST00000589867	SUPT4H1	P63272	117 aa	Known RBP	13.15	□□□□□ -0.3
MBD1-221	ENST00000589867	PRCD	Q00LT1	54 aa		13.15	□□□□□ -0.3
MBD1-221	ENST00000589867	DEFB121	Q5J5C9	76 aa		13.15	□□□□□ -0.3
MBD1-221	ENST00000589867	SELENOH	Q8IZQ5	122 aa	Known RBP	13.15	□□□□□ -0.3
MBD1-221	ENST00000589867	OR4A16	Q8NH70	328 aa		13.15	□□□□□ -0.3
MBD1-221	ENST00000589867	EEF1AKMT3	Q96AZ1	226 aa		13.15	□□□□□ -0.3
MBD1-221	ENST00000589867	OR4C12	Q96R67	309 aa		13.15	□□□□□ -0.3
MBD1-221	ENST00000589867	SIGLEC8	Q9NYZ4	499 aa		13.15	□□□□□ -0.3
MBD1-221	ENST00000589867	PRR13	Q9NZ81	148 aa		13.15	□□□□□ -0.3
MBD1-221	ENST00000589867	ZMAT5	Q9UDW3	170 aa	Known RBP	13.15	□□□□□ -0.3
MBD1-221	ENST00000589867	C14orf166	Q9Y224	244 aa	Known RBP	13.15	□□□□□ -0.3
MBD1-221	ENST00000589867	ST8SIA3	O43173	380 aa		13.14	□□□□□ -0.31
MBD1-221	ENST00000589867	GGCT	O75223	188 aa	Known RBP	13.14	□□□□□ -0.31
MBD1-221	ENST00000589867	CLEC3B	P05452	202 aa		13.14	□□□□□ -0.31
MBD1-221	ENST00000589867	BAK1	Q16611	211 aa		13.14	□□□□□ -0.31
MBD1-221	ENST00000589867	TRIM16L	Q309B1	348 aa		13.14	□□□□□ -0.31
MBD1-221	ENST00000589867	SPINK9	Q5DT21	86 aa		13.14	□□□□□ -0.31
MBD1-221	ENST00000589867	ELOVL1	Q9BW60	279 aa		13.14	□□□□□ -0.31
MBD1-221	ENST00000589867	MCUB	Q9NWR8	336 aa		13.14	□□□□□ -0.31
MBD1-221	ENST00000589867	TRBV7-1	A0A0A6YYK4	115 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	IGHV3-21	A0A0B4J1V1	117 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	B3GALNT1	O75752	331 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	GP9	P14770	177 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	ARL3	P36405	182 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	AKR1C2	P52895	323 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	TMEM187	Q14656	261 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	AARD	Q4LEZ3	155 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	SLC25A24	Q6NUK1	477 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	GPHB5	Q86YW7	130 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	ZNF114	Q8NC26	417 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	VN1R17P	Q8TDU5	208 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	GALNT14	Q96FL9	552 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	CXorf58	Q96LI9	332 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	TMEM56	Q96MV1	263 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	ZC4H2	Q9NQZ6	224 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	SCP2D1	Q9UJQ7	156 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	TMEM56-RWDD3	S4R434	201 aa		13.13	□□□□□ -0.31
MBD1-221	ENST00000589867	IZUMO1R	A6ND01	250 aa		13.12	□□□□□ -0.31
MBD1-221	ENST00000589867	INS-IGF2	F8WCM5	200 aa		13.12	□□□□□ -0.31
MBD1-221	ENST00000589867	GPR183	P32249	361 aa		13.12	□□□□□ -0.31
MBD1-221	ENST00000589867	FAM209B	Q5JX69	171 aa		13.12	□□□□□ -0.31
MBD1-221	ENST00000589867	PVRIG	Q6DKI7	326 aa		13.12	□□□□□ -0.31
MBD1-221	ENST00000589867	UNQ9165/PRO28630	Q6UXU0	137 aa		13.12	□□□□□ -0.31
MBD1-221	ENST00000589867		Q8N1Y9	231 aa		13.12	□□□□□ -0.31
MBD1-221	ENST00000589867	TOMM5	Q8N4H5	51 aa		13.12	□□□□□ -0.31
MBD1-221	ENST00000589867	OR1P1	Q8NH06	330 aa		13.12	□□□□□ -0.31
MBD1-221	ENST00000589867	SCARB1	Q8WTV0	552 aa		13.12	□□□□□ -0.31
MBD1-221	ENST00000589867	RBPMS	Q93062	196 aa	Known RBP	13.12	□□□□□ -0.31
MBD1-221	ENST00000589867	GPR146	Q96CH1	333 aa		13.12	□□□□□ -0.31
MBD1-221	ENST00000589867	TMEM213	A2RRL7	107 aa		13.11	□□□□□ -0.31
MBD1-221	ENST00000589867	C2orf70	A6NJV1	201 aa		13.11	□□□□□ -0.31
MBD1-221	ENST00000589867		I3L2K1	104 aa		13.11	□□□□□ -0.31
MBD1-221	ENST00000589867	LGALS9	O00182	355 aa		13.11	□□□□□ -0.31
MBD1-221	ENST00000589867	ADM	P35318	185 aa		13.11	□□□□□ -0.31
MBD1-221	ENST00000589867	DHODH	Q02127	395 aa		13.11	□□□□□ -0.31
MBD1-221	ENST00000589867	B9D2	Q9BPU9	175 aa		13.11	□□□□□ -0.31
MBD1-221	ENST00000589867	NDUFA13	Q9P0J0	144 aa		13.11	□□□□□ -0.31
MBD1-221	ENST00000589867	STAB2	Q8WWQ8	2551 aa		13.11	□□□□□ -0.31
MBD1-221	ENST00000589867	TENM3	Q9P273	2699 aa		13.1	□□□□□ -0.31
MBD1-221	ENST00000589867	LY86	O95711	162 aa		13.1	□□□□□ -0.31
MBD1-221	ENST00000589867	TATDN3	Q17R31	274 aa		13.1	□□□□□ -0.31
MBD1-221	ENST00000589867	SPANXN2	Q5MJ10	180 aa		13.1	□□□□□ -0.31
MBD1-221	ENST00000589867	TMEM268	Q5VZI3	342 aa		13.1	□□□□□ -0.31
MBD1-221	ENST00000589867	CACNG8	Q8WXS5	425 aa		13.1	□□□□□ -0.31
MBD1-221	ENST00000589867	CHRDL1	Q9BU40	450 aa		13.1	□□□□□ -0.31
MBD1-221	ENST00000589867	THYN1	Q9P016	225 aa		13.1	□□□□□ -0.31
MBD1-221	ENST00000589867	IGHV3-35	A0A0C4DH35	117 aa		13.09	□□□□□ -0.31
MBD1-221	ENST00000589867		A8MWP6	167 aa		13.09	□□□□□ -0.31
MBD1-221	ENST00000589867	AP3S2	P59780	193 aa		13.09	□□□□□ -0.31
MBD1-221	ENST00000589867	C11orf87	Q6NUJ2	197 aa		13.09	□□□□□ -0.31
MBD1-221	ENST00000589867	FAM219A	Q8IW50	185 aa		13.09	□□□□□ -0.31
MBD1-221	ENST00000589867	SGPP2	Q8IWX5	399 aa		13.09	□□□□□ -0.31
MBD1-221	ENST00000589867	SLC35G3	Q8N808	338 aa		13.09	□□□□□ -0.31
MBD1-221	ENST00000589867	RRNAD1	Q96FB5	475 aa	Known RBP	13.09	□□□□□ -0.31
MBD1-221	ENST00000589867	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.09	□□□□□ -0.31
MBD1-221	ENST00000589867	PLEKHA3	Q9HB20	300 aa		13.09	□□□□□ -0.31
MBD1-221	ENST00000589867	C21orf62	Q9NYP8	219 aa		13.09	□□□□□ -0.31
MBD1-221	ENST00000589867	OR2T8	A6NH00	312 aa		13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	TGOLN2	O43493	480 aa		13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	ATG12	O94817	140 aa		13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	RNASE2	P10153	161 aa	Known RBP	13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	FOLR2	P14207	255 aa		13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	AKR1C4	P17516	323 aa		13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	FAU	P35544	74 aa	Known RBP	13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	DEFB114	Q30KQ6	69 aa		13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	BSX	Q3C1V8	233 aa		13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	NMS	Q5H8A3	153 aa		13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	OR1L6	Q8NGR2	347 aa		13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	DEDD2	Q8WXF8	326 aa		13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	IL22RA2	Q969J5	263 aa		13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	SCGB3A2	Q96PL1	93 aa		13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	PEMT	Q9UBM1	199 aa		13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	CACNG5	Q9UF02	275 aa		13.08	□□□□□ -0.32
MBD1-221	ENST00000589867	ZNF785	A8K8V0	405 aa		13.07	□□□□□ -0.32
MBD1-221	ENST00000589867	MT-CO2	P00403	227 aa		13.07	□□□□□ -0.32
MBD1-221	ENST00000589867	IGHV3-48	P01763	117 aa		13.07	□□□□□ -0.32
MBD1-221	ENST00000589867	BTC	P35070	178 aa		13.07	□□□□□ -0.32
MBD1-221	ENST00000589867	CD300E	Q496F6	205 aa	Predicted RBP	13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms