RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 TRIP12Q14669 1992 aaPredicted RBP12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 F2RL2O00254 374 aa12.31□□□□□ -0.44
SMARCA4-214ENST00000589677 OSR1Q8TAX0 266 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-214ENST00000589677 C1QTNF5Q9BXJ0 243 aa12.31□□□□□ -0.44
SMARCA4-214ENST00000589677 IGKV1D-8A0A087WSZ0 117 aa12.31□□□□□ -0.44
SMARCA4-214ENST00000589677 MRPL27Q9P0M9 148 aaKnown RBP12.31□□□□□ -0.44
SMARCA4-214ENST00000589677 POLR3KQ9Y2Y1 108 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-214ENST00000589677 CD5LO43866 347 aa12.31□□□□□ -0.44
SMARCA4-214ENST00000589677 CD3EP07766 207 aa12.31□□□□□ -0.44
SMARCA4-214ENST00000589677 C3orf79P0CE67 100 aa12.31□□□□□ -0.44
SMARCA4-214ENST00000589677 GFRA1P56159 465 aa12.31□□□□□ -0.44
SMARCA4-214ENST00000589677 SCGB3A1Q96QR1 104 aa12.31□□□□□ -0.44
SMARCA4-214ENST00000589677 RGPD3A6NKT7 1758 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-214ENST00000589677 CTSSP25774 331 aa12.31□□□□□ -0.44
SMARCA4-214ENST00000589677 GAGE12BA1L429 117 aa12.3□□□□□ -0.44
SMARCA4-214ENST00000589677 HOXA3O43365 443 aaPredicted RBP12.3□□□□□ -0.44
SMARCA4-214ENST00000589677 KLF14Q8TD94 323 aaPredicted RBP12.3□□□□□ -0.44
SMARCA4-214ENST00000589677 CTSBP07858 339 aa12.3□□□□□ -0.44
SMARCA4-214ENST00000589677 RPL39P5Q59GN2 51 aa12.3□□□□□ -0.44
SMARCA4-214ENST00000589677 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.3□□□□□ -0.44
SMARCA4-214ENST00000589677 FAM214BQ7L5A3 538 aa12.3□□□□□ -0.44
SMARCA4-214ENST00000589677 ITLN1Q8WWA0 313 aa12.3□□□□□ -0.44
SMARCA4-214ENST00000589677 ARRDC1-AS1Q9H2J1 176 aa12.3□□□□□ -0.44
SMARCA4-214ENST00000589677 DPM2O94777 84 aa12.3□□□□□ -0.44
SMARCA4-214ENST00000589677 MOSP00540 346 aa12.3□□□□□ -0.44
SMARCA4-214ENST00000589677 LINC01559Q495D7 138 aa12.3□□□□□ -0.44
SMARCA4-214ENST00000589677 MPV17L2Q567V2 206 aa12.3□□□□□ -0.44
SMARCA4-214ENST00000589677 FAM90A9PA6NNJ1 464 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 PSG1P11464 419 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 FOXL2P58012 376 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 TMEM170BQ5T4T1 132 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 EP400Q96L91 3159 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 CD55P08174 381 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 HES7Q9BYE0 225 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 SIPA1L1O43166 1804 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 C9JQL5 133 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 ECSCRQ19T08 205 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 FAM90A2PQ658T7 463 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 ZFAND6Q6FIF0 208 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 TEX45Q8NA69 505 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 REPIN1Q9BWE0 567 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 A0A1W2PS18 150 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 LEPP41159 167 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 OCIAD2Q56VL3 154 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 C19orf54Q5BKX5 351 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 OTORQ9NRC9 128 aa12.29□□□□□ -0.44
SMARCA4-214ENST00000589677 IGHV3-72A0A0B4J1Y9 119 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 A8MWV9 139 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 ZNHIT1O43257 154 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 PAX2Q02962 417 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 EFNB3Q15768 340 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 ZNF585BQ52M93 769 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 WDR82Q6UXN9 313 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 TMEM74BQ9NUR3 256 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 SLC25A53Q5H9E4 307 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 ZNF441Q8N8Z8 693 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 ARID2Q68CP9 1835 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 OR10W1Q8NGF6 305 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 OR9G1Q8NH87 305 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 MESP1Q9BRJ9 268 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 Q9H3A6 140 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 SMPXQ9UHP9 88 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 EPDR1Q9UM22 224 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 A0A1B0GWJ7 208 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 SS18L1O75177 396 aaPredicted RBP12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 DNAL4O96015 105 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 REG1AP05451 166 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 CACNG7P62955 275 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 GCSAMLQ5JQS6 135 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 RPP25LQ8N5L8 163 aaKnown RBP12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 FER1L6-AS1Q8NA97 138 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 LEAP2Q969E1 77 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 LYZL4Q96KX0 146 aa12.28□□□□□ -0.44
SMARCA4-214ENST00000589677 CELA2AP08217 269 aa12.27□□□□□ -0.44
SMARCA4-214ENST00000589677 ACP7Q6ZNF0 438 aa12.27□□□□□ -0.44
SMARCA4-214ENST00000589677 PARP14Q460N5 1801 aa12.27□□□□□ -0.44
SMARCA4-214ENST00000589677 PPBPP02775 128 aa12.27□□□□□ -0.44
SMARCA4-214ENST00000589677 TRAV24A0A0B4J272 114 aa12.27□□□□□ -0.45
SMARCA4-214ENST00000589677 NMSQ5H8A3 153 aa12.27□□□□□ -0.45
SMARCA4-214ENST00000589677 NXT2Q9NPJ8 142 aaKnown RBP12.27□□□□□ -0.45
SMARCA4-214ENST00000589677 IGKV3D-11A0A0A0MRZ8 115 aa12.27□□□□□ -0.45
SMARCA4-214ENST00000589677 Q0VG73 95 aa12.27□□□□□ -0.45
SMARCA4-214ENST00000589677 OR5AN1Q8NGI8 311 aa12.27□□□□□ -0.45
SMARCA4-214ENST00000589677 CST9LQ9H4G1 147 aa12.27□□□□□ -0.45
SMARCA4-214ENST00000589677 IGKV3-7A0A075B6H7 116 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 GAGE2BQ13066 116 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 GAGE2EQ4V326 116 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 SMRP1Q8NCR6 262 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 TMEM190Q8WZ59 177 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 GAGE2DQ9UEU5 116 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 TGFBR3LH3BV60 316 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 NDUFA3O95167 84 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 SPTBP11277 2137 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 CFPP27918 469 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 E9PQ18 207 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 IGKCP01834 107 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 NPSP0C0P6 89 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 SPSB3Q6PJ21 355 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 IFI27L1Q96BM0 104 aa12.26□□□□□ -0.45
SMARCA4-214ENST00000589677 DEPPQ9NTK1 212 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms