RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 TMEM178BH3BS89 294 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 NDUFB4O95168 129 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 OR4A8P0C604 315 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 CT45A6P0DMU7 189 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 CT45A5P0DMU8 189 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 CT45A7P0DMV0 189 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 LGALS7P47929 136 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 COMPP49747 757 aaPredicted RBP5.87□□□□□ -1.47
SPIDR-228ENST00000588781 BPIFB3P59826 476 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 UBE2G2P60604 165 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 GNB1P62873 340 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 RPL8P62917 257 aaKnown RBP5.87□□□□□ -1.47
SPIDR-228ENST00000588781 PRR20EP86478 221 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 PRR20CP86479 221 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 PRR20DP86480 221 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 PRR20BP86481 221 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 PRR20AP86496 221 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 FAM27E3Q08E93 113 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 ADIPOQQ15848 244 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 HLA-DRB5Q30154 266 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 ACTL10Q5JWF8 245 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 VKORC1L1Q8N0U8 176 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 Q8N7P7 452 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 NECAP1Q8NC96 275 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 STXBP6Q8NFX7 210 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 OR4C13Q8NGP0 309 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 OR10X1Q8NGY0 326 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 TMEM167AQ8TBQ9 72 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 ZNF596Q8TC21 504 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 ABHD5Q8WTS1 349 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 GATAD1Q8WUU5 269 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 PLPPR2Q96GM1 343 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 PACRGQ96M98 296 aaPredicted RBP5.87□□□□□ -1.47
SPIDR-228ENST00000588781 HARBI1Q96MB7 349 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 CHRDL1Q9BU40 450 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 PATZ1Q9HBE1 687 aaKnown RBP5.87□□□□□ -1.47
SPIDR-228ENST00000588781 DYNLRB1Q9NP97 96 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 JKAMPQ9P055 326 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 KAAG1Q9UBP8 84 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 WASHC3Q9Y3C0 194 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 TRAV3A0A0B4J244 114 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 A0A0G2JNJ9 132 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 A0A0U1RQK1 487 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 TEX50A0A1B0GTY4 177 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 A0A1W2PRE2 83 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 ZNF320A2RRD8 509 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 B9A039 149 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 FSTL3O95633 263 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 MT-ND6P03923 174 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 OR5G3P0C626 314 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 C8orf88P0DMB2 117 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 FABP4P15090 132 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 HIST1H1BP16401 226 aaKnown RBP5.86□□□□□ -1.47
SPIDR-228ENST00000588781 ATP5G3P48201 142 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 PDLIM4P50479 330 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 TDGF1P3P51864 188 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 CNN1P51911 297 aaKnown RBP5.86□□□□□ -1.47
SPIDR-228ENST00000588781 PRRX1P54821 245 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 PKIAP61925 76 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 CD69Q07108 199 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 SRSF1Q07955 248 aaKnown RBP eCLIP5.86□□□□□ -1.47
SPIDR-228ENST00000588781 TIGITQ495A1 244 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 ARSJQ5FYB0 599 aaPredicted RBP5.86□□□□□ -1.47
SPIDR-228ENST00000588781 FAM78BQ5VT40 261 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 WDR73Q6P4I2 378 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 DOLPP1Q86YN1 238 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 FAM216BQ8N7L0 139 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 OR5AN1Q8NGI8 311 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 OR4P4Q8NGL7 312 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 OR9G1Q8NH87 305 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 SSMEM1Q8WWF3 244 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 H1FXQ92522 213 aaKnown RBP5.86□□□□□ -1.47
SPIDR-228ENST00000588781 RND1Q92730 232 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 NABP2Q9BQ15 211 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 GPR61Q9BZJ8 451 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 TMEM106BQ9NUM4 274 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 IL36BQ9NZH7 164 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 Q9UFV3 132 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 SSUH2Q9Y2M2 353 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 ZNF835Q9Y2P0 537 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 AMMECR1Q9Y4X0 333 aaPredicted RBP5.86□□□□□ -1.47
SPIDR-228ENST00000588781 TRAPPC1Q9Y5R8 145 aa5.86□□□□□ -1.47
SPIDR-228ENST00000588781 HELTA6NFD8 242 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 DPRXA6NFQ7 191 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 H0YJW9 148 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 CORTO00230 105 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 PHOX2AO14813 284 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 IGHV3-7P01780 117 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 IGHV2-70P01814 119 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 RBP4P02753 201 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 CD3EP07766 207 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 SOD3P08294 240 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 SAA1P0DJI8 122 aaPredicted RBP5.85□□□□□ -1.47
SPIDR-228ENST00000588781 RNASE2P10153 161 aaKnown RBP5.85□□□□□ -1.47
SPIDR-228ENST00000588781 SELLP14151 372 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 IGFBP2P18065 325 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 APOBEC3AP31941 199 aaPredicted RBP5.85□□□□□ -1.47
SPIDR-228ENST00000588781 GNG4P50150 75 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 ZNF137PP52743 207 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 LINC00205P59089 165 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms