RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 DBX1A6NMT0 343 aa13.5□□□□□ -0.25
CCDC43-204ENST00000588687 CHEK1O14757 476 aa13.5□□□□□ -0.25
CCDC43-204ENST00000588687 CYB5BO43169 146 aa13.5□□□□□ -0.25
CCDC43-204ENST00000588687 MRPS14O60783 128 aaKnown RBP13.5□□□□□ -0.25
CCDC43-204ENST00000588687 PSMB9P28065 219 aa13.5□□□□□ -0.25
CCDC43-204ENST00000588687 HSPA13P48723 471 aa13.5□□□□□ -0.25
CCDC43-204ENST00000588687 FAM90A2PQ658T7 463 aa13.5□□□□□ -0.25
CCDC43-204ENST00000588687 OR5AP2Q8NGF4 316 aa13.5□□□□□ -0.25
CCDC43-204ENST00000588687 GATAD1Q8WUU5 269 aa13.5□□□□□ -0.25
CCDC43-204ENST00000588687 RNF167Q9H6Y7 350 aa13.5□□□□□ -0.25
CCDC43-204ENST00000588687 ANAPC10Q9UM13 185 aa13.5□□□□□ -0.25
CCDC43-204ENST00000588687 IGHV7-4-1A0A0J9YVY3 117 aa13.49□□□□□ -0.25
CCDC43-204ENST00000588687 RLN1P04808 185 aa13.49□□□□□ -0.25
CCDC43-204ENST00000588687 NANOS2P60321 138 aaKnown RBP13.49□□□□□ -0.25
CCDC43-204ENST00000588687 FCAMRQ8WWV6 532 aa13.49□□□□□ -0.25
CCDC43-204ENST00000588687 CSTL1Q9H114 145 aa13.49□□□□□ -0.25
CCDC43-204ENST00000588687 NSG2Q9Y328 171 aa13.49□□□□□ -0.25
CCDC43-204ENST00000588687 DNAH11Q96DT5 4516 aa13.48□□□□□ -0.25
CCDC43-204ENST00000588687 F2RP25116 425 aa13.48□□□□□ -0.25
CCDC43-204ENST00000588687 MXD1Q05195 221 aa13.48□□□□□ -0.25
CCDC43-204ENST00000588687 UBAC2Q8NBM4 344 aa13.48□□□□□ -0.25
CCDC43-204ENST00000588687 MOB3AQ96BX8 217 aa13.48□□□□□ -0.25
CCDC43-204ENST00000588687 RHPN1-AS1Q9BWJ2 59 aa13.48□□□□□ -0.25
CCDC43-204ENST00000588687 FXYD6Q9H0Q3 95 aa13.48□□□□□ -0.25
CCDC43-204ENST00000588687 TMEM14BQ9NUH8 114 aa13.48□□□□□ -0.25
CCDC43-204ENST00000588687 MEIS3P1A6NDR6 274 aa13.47□□□□□ -0.25
CCDC43-204ENST00000588687 MPTX1A8MV57 137 aa13.47□□□□□ -0.25
CCDC43-204ENST00000588687 I3L2K1 104 aa13.47□□□□□ -0.25
CCDC43-204ENST00000588687 PGLYRP1O75594 196 aaPredicted RBP13.47□□□□□ -0.25
CCDC43-204ENST00000588687 ERVK-16P61578 105 aa13.47□□□□□ -0.25
CCDC43-204ENST00000588687 Q56UQ5 140 aa13.47□□□□□ -0.25
CCDC43-204ENST00000588687 OR1P1Q8NH06 330 aa13.47□□□□□ -0.25
CCDC43-204ENST00000588687 FCGR1BQ92637 280 aa13.47□□□□□ -0.25
CCDC43-204ENST00000588687 RARRES2Q99969 163 aa13.47□□□□□ -0.25
CCDC43-204ENST00000588687 SSR3Q9UNL2 185 aa13.47□□□□□ -0.25
CCDC43-204ENST00000588687 OR51B2Q9Y5P1 312 aa13.47□□□□□ -0.25
CCDC43-204ENST00000588687 PKD1P98161 4303 aa13.46□□□□□ -0.25
CCDC43-204ENST00000588687 IGHV3-49A0A0A0MS15 119 aa13.46□□□□□ -0.25
CCDC43-204ENST00000588687 C15orf61A6NNL5 157 aa13.46□□□□□ -0.25
CCDC43-204ENST00000588687 KRASP01116 189 aa13.46□□□□□ -0.25
CCDC43-204ENST00000588687 G6PCP35575 357 aa13.46□□□□□ -0.25
CCDC43-204ENST00000588687 CBX5P45973 191 aa13.46□□□□□ -0.25
CCDC43-204ENST00000588687 DHRS11Q6UWP2 260 aa13.46□□□□□ -0.25
CCDC43-204ENST00000588687 TMEM116Q8NCL8 245 aa13.46□□□□□ -0.25
CCDC43-204ENST00000588687 C11orf45Q8TAV5 145 aa13.46□□□□□ -0.25
CCDC43-204ENST00000588687 DGCR14Q96DF8 476 aaKnown RBP13.46□□□□□ -0.25
CCDC43-204ENST00000588687 HINT2Q9BX68 163 aa13.46□□□□□ -0.25
CCDC43-204ENST00000588687 VCX3BQ9H321 246 aa13.46□□□□□ -0.25
CCDC43-204ENST00000588687 RAB26Q9ULW5 256 aa13.46□□□□□ -0.25
CCDC43-204ENST00000588687 LPAR6P43657 344 aa13.45□□□□□ -0.26
CCDC43-204ENST00000588687 RFX2P48378 723 aa13.45□□□□□ -0.26
CCDC43-204ENST00000588687 HERV-K104P61576 105 aa13.45□□□□□ -0.26
CCDC43-204ENST00000588687 RBMS2Q15434 407 aaKnown RBP13.45□□□□□ -0.26
CCDC43-204ENST00000588687 IDNKQ5T6J7 187 aa13.45□□□□□ -0.26
CCDC43-204ENST00000588687 OR11H2Q8NH07 326 aa13.45□□□□□ -0.26
CCDC43-204ENST00000588687 BORCS5Q969J3 196 aa13.45□□□□□ -0.26
CCDC43-204ENST00000588687 C6orf62Q9GZU0 229 aaPredicted RBP13.45□□□□□ -0.26
CCDC43-204ENST00000588687 NXF2Q9GZY0 626 aaKnown RBP13.45□□□□□ -0.26
CCDC43-204ENST00000588687 MFFQ9GZY8 342 aa13.45□□□□□ -0.26
CCDC43-204ENST00000588687 EHFQ9NZC4 300 aa13.45□□□□□ -0.26
CCDC43-204ENST00000588687 TFPI2P48307 235 aa13.44□□□□□ -0.26
CCDC43-204ENST00000588687 RELQ04864 619 aaPredicted RBP13.44□□□□□ -0.26
CCDC43-204ENST00000588687 ZNF114Q8NC26 417 aa13.44□□□□□ -0.26
CCDC43-204ENST00000588687 ZNF2Q9BSG1 426 aaPredicted RBP13.44□□□□□ -0.26
CCDC43-204ENST00000588687 FBXL17Q9UF56 701 aa13.44□□□□□ -0.26
CCDC43-204ENST00000588687 PRNDQ9UKY0 176 aa13.44□□□□□ -0.26
CCDC43-204ENST00000588687 IGKV3-7A0A075B6H7 116 aa13.43□□□□□ -0.26
CCDC43-204ENST00000588687 NUPL2O15504 423 aaKnown RBP13.43□□□□□ -0.26
CCDC43-204ENST00000588687 NAT1P18440 290 aa13.43□□□□□ -0.26
CCDC43-204ENST00000588687 LILRB2Q8N423 598 aa13.43□□□□□ -0.26
CCDC43-204ENST00000588687 Q8NAQ8 132 aa13.43□□□□□ -0.26
CCDC43-204ENST00000588687 DIABLOQ9NR28 239 aa13.43□□□□□ -0.26
CCDC43-204ENST00000588687 ABCA13Q86UQ4 5058 aa13.42□□□□□ -0.26
CCDC43-204ENST00000588687 IGHV3OR16-13A0A075B7E8 117 aa13.42□□□□□ -0.26
CCDC43-204ENST00000588687 IGHV3-74A0A0B4J1X5 117 aa13.42□□□□□ -0.26
CCDC43-204ENST00000588687 DEFB4AO15263 64 aa13.42□□□□□ -0.26
CCDC43-204ENST00000588687 XRCC3O43542 346 aa13.42□□□□□ -0.26
CCDC43-204ENST00000588687 CA1P00915 261 aaPredicted RBP13.42□□□□□ -0.26
CCDC43-204ENST00000588687 GIG44P09565 113 aaPredicted RBP13.42□□□□□ -0.26
CCDC43-204ENST00000588687 GBGT1Q8N5D6 347 aa13.42□□□□□ -0.26
CCDC43-204ENST00000588687 FAM24BQ8N5W8 94 aa13.42□□□□□ -0.26
CCDC43-204ENST00000588687 SLC25A46Q96AG3 418 aa13.42□□□□□ -0.26
CCDC43-204ENST00000588687 TMEM56Q96MV1 263 aa13.42□□□□□ -0.26
CCDC43-204ENST00000588687 TXN2Q99757 166 aa13.42□□□□□ -0.26
CCDC43-204ENST00000588687 VSIRQ9H7M9 311 aa13.42□□□□□ -0.26
CCDC43-204ENST00000588687 ZFAND3Q9H8U3 227 aa13.42□□□□□ -0.26
CCDC43-204ENST00000588687 APLNQ9ULZ1 77 aa13.42□□□□□ -0.26
CCDC43-204ENST00000588687 TRAV14DV4A0A0A6YYC5 116 aa13.41□□□□□ -0.26
CCDC43-204ENST00000588687 SNAPC5O75971 98 aa13.41□□□□□ -0.26
CCDC43-204ENST00000588687 MT-CO2P00403 227 aa13.41□□□□□ -0.26
CCDC43-204ENST00000588687 IGKV1-39P01597 117 aa13.41□□□□□ -0.26
CCDC43-204ENST00000588687 IGHV3-48P01763 117 aa13.41□□□□□ -0.26
CCDC43-204ENST00000588687 APOHP02749 345 aaPredicted RBP13.41□□□□□ -0.26
CCDC43-204ENST00000588687 IGKV1D-39P04432 117 aa13.41□□□□□ -0.26
CCDC43-204ENST00000588687 CMC4P56277 68 aaPredicted RBP13.41□□□□□ -0.26
CCDC43-204ENST00000588687 TCTAP57738 103 aa13.41□□□□□ -0.26
CCDC43-204ENST00000588687 TCF24Q7RTU0 167 aa13.41□□□□□ -0.26
CCDC43-204ENST00000588687 C2CD4CQ8TF44 421 aa13.41□□□□□ -0.26
CCDC43-204ENST00000588687 ST8SIA2Q92186 375 aa13.41□□□□□ -0.26
CCDC43-204ENST00000588687 SEC22AQ96IW7 307 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms