RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 THAP7Q9BT49 309 aaPredicted RBP14.79□□□□□ -0.04
TPM4-208ENST00000588410 C21orf62Q9NYP8 219 aa14.79□□□□□ -0.04
TPM4-208ENST00000588410 UFC1Q9Y3C8 167 aa14.79□□□□□ -0.04
TPM4-208ENST00000588410 IGHV3-21A0A0B4J1V1 117 aa14.78□□□□□ -0.04
TPM4-208ENST00000588410 IGHV3-35A0A0C4DH35 117 aa14.78□□□□□ -0.04
TPM4-208ENST00000588410 OR2T8A6NH00 312 aa14.78□□□□□ -0.04
TPM4-208ENST00000588410 A8MWP6 167 aa14.78□□□□□ -0.04
TPM4-208ENST00000588410 DISC1C4P0D8 188 aa14.78□□□□□ -0.04
TPM4-208ENST00000588410 AKR1C2P52895 323 aa14.78□□□□□ -0.04
TPM4-208ENST00000588410 HSPE1P61604 102 aaKnown RBP14.78□□□□□ -0.04
TPM4-208ENST00000588410 TRIM16LQ309B1 348 aa14.78□□□□□ -0.04
TPM4-208ENST00000588410 ZNF57Q68EA5 555 aaPredicted RBP14.78□□□□□ -0.04
TPM4-208ENST00000588410 UXS1Q8NBZ7 420 aa14.78□□□□□ -0.04
TPM4-208ENST00000588410 OR13C8Q8NGS7 320 aa14.78□□□□□ -0.04
TPM4-208ENST00000588410 OR1P1Q8NH06 330 aa14.78□□□□□ -0.04
TPM4-208ENST00000588410 MARCH1Q8TCQ1 289 aa14.78□□□□□ -0.04
TPM4-208ENST00000588410 CACNG8Q8WXS5 425 aa14.78□□□□□ -0.04
TPM4-208ENST00000588410 BSCL2Q96G97 398 aaPredicted RBP14.78□□□□□ -0.04
TPM4-208ENST00000588410 TP53RKQ96S44 253 aa14.78□□□□□ -0.04
TPM4-208ENST00000588410 NEURL2Q9BR09 285 aa14.78□□□□□ -0.04
TPM4-208ENST00000588410 SORL1Q92673 2214 aa14.78□□□□□ -0.04
TPM4-208ENST00000588410 TMEM213A2RRL7 107 aa14.77□□□□□ -0.05
TPM4-208ENST00000588410 ZNF785A8K8V0 405 aa14.77□□□□□ -0.05
TPM4-208ENST00000588410 CTDSPLO15194 276 aa14.77□□□□□ -0.05
TPM4-208ENST00000588410 CTSDP07339 412 aaPredicted RBP14.77□□□□□ -0.05
TPM4-208ENST00000588410 MFAP2P55001 183 aa14.77□□□□□ -0.05
TPM4-208ENST00000588410 TM4SF20Q53R12 229 aa14.77□□□□□ -0.05
TPM4-208ENST00000588410 Q56UQ5 140 aa14.77□□□□□ -0.05
TPM4-208ENST00000588410 UBAC2Q8NBM4 344 aa14.77□□□□□ -0.05
TPM4-208ENST00000588410 SCARB1Q8WTV0 552 aa14.77□□□□□ -0.05
TPM4-208ENST00000588410 MARC2Q969Z3 335 aa14.77□□□□□ -0.05
TPM4-208ENST00000588410 PLEKHA3Q9HB20 300 aa14.77□□□□□ -0.05
TPM4-208ENST00000588410 C14orf166Q9Y224 244 aaKnown RBP14.77□□□□□ -0.05
TPM4-208ENST00000588410 H3BMQ9 156 aa14.76□□□□□ -0.05
TPM4-208ENST00000588410 B3GALNT1O75752 331 aa14.76□□□□□ -0.05
TPM4-208ENST00000588410 AKAIN1P0CW23 69 aa14.76□□□□□ -0.05
TPM4-208ENST00000588410 ELLP55199 621 aaPredicted RBP14.76□□□□□ -0.05
TPM4-208ENST00000588410 ERHP84090 104 aaKnown RBP14.76□□□□□ -0.05
TPM4-208ENST00000588410 PRCDQ00LT1 54 aa14.76□□□□□ -0.05
TPM4-208ENST00000588410 SP6Q3SY56 376 aa14.76□□□□□ -0.05
TPM4-208ENST00000588410 FAAP20Q6NZ36 180 aa14.76□□□□□ -0.05
TPM4-208ENST00000588410 SPSB3Q6PJ21 355 aa14.76□□□□□ -0.05
TPM4-208ENST00000588410 UNQ9165/PRO28630Q6UXU0 137 aa14.76□□□□□ -0.05
TPM4-208ENST00000588410 OR2C3Q8N628 320 aa14.76□□□□□ -0.05
TPM4-208ENST00000588410 RNASE11Q8TAA1 199 aaKnown RBP14.76□□□□□ -0.05
TPM4-208ENST00000588410 ISOC1Q96CN7 298 aa14.76□□□□□ -0.05
TPM4-208ENST00000588410 MISP3Q96FF7 219 aa14.76□□□□□ -0.05
TPM4-208ENST00000588410 WDR89Q96FK6 387 aaPredicted RBP14.76□□□□□ -0.05
TPM4-208ENST00000588410 ATP6V0BQ99437 205 aa14.76□□□□□ -0.05
TPM4-208ENST00000588410 RSL24D1Q9UHA3 163 aaKnown RBP14.76□□□□□ -0.05
TPM4-208ENST00000588410 SELENOKQ9Y6D0 94 aa14.76□□□□□ -0.05
TPM4-208ENST00000588410 COL7A1Q02388 2944 aa14.76□□□□□ -0.05
TPM4-208ENST00000588410 IZUMO4Q1ZYL8 232 aa14.75□□□□□ -0.05
TPM4-208ENST00000588410 SLC16A13Q7RTY0 426 aa14.75□□□□□ -0.05
TPM4-208ENST00000588410 RRNAD1Q96FB5 475 aaKnown RBP14.75□□□□□ -0.05
TPM4-208ENST00000588410 TM2D3Q9BRN9 247 aa14.75□□□□□ -0.05
TPM4-208ENST00000588410 PDCD10Q9BUL8 212 aa14.75□□□□□ -0.05
TPM4-208ENST00000588410 ZNF436Q9C0F3 470 aaPredicted RBP14.75□□□□□ -0.05
TPM4-208ENST00000588410 GAR1Q9NY12 217 aaKnown RBP14.75□□□□□ -0.05
TPM4-208ENST00000588410 MRPL27Q9P0M9 148 aaKnown RBP14.75□□□□□ -0.05
TPM4-208ENST00000588410 MLXQ9UH92 298 aa14.75□□□□□ -0.05
TPM4-208ENST00000588410 TEX13DA0A0J9YY54 714 aaPredicted RBP14.74□□□□□ -0.05
TPM4-208ENST00000588410 K7EIM0 57 aa14.74□□□□□ -0.05
TPM4-208ENST00000588410 IFNA17P01571 189 aa14.74□□□□□ -0.05
TPM4-208ENST00000588410 IGKV1-5P01602 117 aa14.74□□□□□ -0.05
TPM4-208ENST00000588410 CD7P09564 240 aa14.74□□□□□ -0.05
TPM4-208ENST00000588410 SURF2Q15527 256 aaPredicted RBP14.74□□□□□ -0.05
TPM4-208ENST00000588410 BTNL8Q6UX41 500 aa14.74□□□□□ -0.05
TPM4-208ENST00000588410 RBPMS2Q6ZRY4 209 aaKnown RBP14.74□□□□□ -0.05
TPM4-208ENST00000588410 TMEM61Q8N0U2 210 aa14.74□□□□□ -0.05
TPM4-208ENST00000588410 SLC35G3Q8N808 338 aa14.74□□□□□ -0.05
TPM4-208ENST00000588410 MCFD2Q8NI22 146 aa14.74□□□□□ -0.05
TPM4-208ENST00000588410 SPATA25Q9BR10 227 aa14.74□□□□□ -0.05
TPM4-208ENST00000588410 CCDC160A6NGH7 325 aa14.73□□□□□ -0.05
TPM4-208ENST00000588410 UCP1P25874 307 aa14.73□□□□□ -0.05
TPM4-208ENST00000588410 SNCAP37840 140 aa14.73□□□□□ -0.05
TPM4-208ENST00000588410 HAGHQ16775 308 aa14.73□□□□□ -0.05
TPM4-208ENST00000588410 SPINK9Q5DT21 86 aa14.73□□□□□ -0.05
TPM4-208ENST00000588410 ZNF114Q8NC26 417 aa14.73□□□□□ -0.05
TPM4-208ENST00000588410 OR4C16Q8NGL9 310 aa14.73□□□□□ -0.05
TPM4-208ENST00000588410 TMEM190Q8WZ59 177 aa14.73□□□□□ -0.05
TPM4-208ENST00000588410 PRRT1Q99946 306 aa14.73□□□□□ -0.05
TPM4-208ENST00000588410 C20orf24Q9BUV8 137 aa14.73□□□□□ -0.05
TPM4-208ENST00000588410 SLIRPQ9GZT3 109 aaKnown RBP14.73□□□□□ -0.05
TPM4-208ENST00000588410 A0A0B4J293 547 aa14.72□□□□□ -0.05
TPM4-208ENST00000588410 FABP12A6NFH5 140 aa14.72□□□□□ -0.05
TPM4-208ENST00000588410 OR11H12B2RN74 326 aa14.72□□□□□ -0.05
TPM4-208ENST00000588410 NDUFA4O00483 81 aa14.72□□□□□ -0.05
TPM4-208ENST00000588410 GSTZ1O43708 216 aaPredicted RBP14.72□□□□□ -0.05
TPM4-208ENST00000588410 SCAF4O95104 1147 aaKnown RBP14.72□□□□□ -0.05
TPM4-208ENST00000588410 C8orf88P0DMB2 117 aa14.72□□□□□ -0.05
TPM4-208ENST00000588410 MFAP4P55083 255 aa14.72□□□□□ -0.05
TPM4-208ENST00000588410 ANKRD55Q3KP44 614 aa14.72□□□□□ -0.05
TPM4-208ENST00000588410 DEFB125Q8N687 156 aa14.72□□□□□ -0.05
TPM4-208ENST00000588410 OR52B4Q8NGK2 314 aa14.72□□□□□ -0.05
TPM4-208ENST00000588410 PINX1Q96BK5 328 aaKnown RBP14.72□□□□□ -0.05
TPM4-208ENST00000588410 CHRDL1Q9BU40 450 aa14.72□□□□□ -0.05
TPM4-208ENST00000588410 ENY2Q9NPA8 101 aa14.72□□□□□ -0.05
TPM4-208ENST00000588410 DAZ1Q9NQZ3 744 aaKnown RBP14.72□□□□□ -0.05
TPM4-208ENST00000588410 TRAV25A0A0B4J276 109 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms